RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 TMEM190Q8WZ59 177 aa9.51□□□□□ -0.89
PTPN7-202ENST00000367279 EEF1AKMT3Q96AZ1 226 aa9.51□□□□□ -0.89
PTPN7-202ENST00000367279 CST9LQ9H4G1 147 aa9.51□□□□□ -0.89
PTPN7-202ENST00000367279 GCSHP23434 173 aa9.51□□□□□ -0.89
PTPN7-202ENST00000367279 CCDC140Q96MF4 163 aa9.51□□□□□ -0.89
PTPN7-202ENST00000367279 KLK15Q9H2R5 256 aa9.51□□□□□ -0.89
PTPN7-202ENST00000367279 ZFAND3Q9H8U3 227 aa9.51□□□□□ -0.89
PTPN7-202ENST00000367279 TMEM160Q9NX00 188 aa9.51□□□□□ -0.89
PTPN7-202ENST00000367279 GTSCR1Q86UQ5 136 aa9.51□□□□□ -0.89
PTPN7-202ENST00000367279 C11orf21Q9P2W6 132 aa9.51□□□□□ -0.89
PTPN7-202ENST00000367279 IGKV3D-20A0A0C4DH25 116 aa9.5□□□□□ -0.89
PTPN7-202ENST00000367279 GAGE12BA1L429 117 aa9.5□□□□□ -0.89
PTPN7-202ENST00000367279 FGF6P10767 208 aa9.5□□□□□ -0.89
PTPN7-202ENST00000367279 DEFB1P60022 68 aa9.5□□□□□ -0.89
PTPN7-202ENST00000367279 KIR3DS1Q14943 382 aa9.5□□□□□ -0.89
PTPN7-202ENST00000367279 BRD3OSQ6XYD6 125 aa9.5□□□□□ -0.89
PTPN7-202ENST00000367279 C8orf86Q6ZUL3 223 aa9.5□□□□□ -0.89
PTPN7-202ENST00000367279 H3BVH4 76 aa9.5□□□□□ -0.89
PTPN7-202ENST00000367279 UBE2E1P51965 193 aa9.5□□□□□ -0.89
PTPN7-202ENST00000367279 SEC11AP67812 179 aa9.5□□□□□ -0.89
PTPN7-202ENST00000367279 ATP5G2Q06055 141 aa9.5□□□□□ -0.89
PTPN7-202ENST00000367279 LY6EQ16553 131 aa9.5□□□□□ -0.89
PTPN7-202ENST00000367279 C1orf122Q6ZSJ8 110 aa9.5□□□□□ -0.89
PTPN7-202ENST00000367279 SLC50A1Q9BRV3 221 aa9.5□□□□□ -0.89
PTPN7-202ENST00000367279 EBI3Q14213 229 aa9.5□□□□□ -0.89
PTPN7-202ENST00000367279 OR1N2Q8NGR9 330 aa9.5□□□□□ -0.89
PTPN7-202ENST00000367279 K7EP13 123 aa9.49□□□□□ -0.89
PTPN7-202ENST00000367279 PPBPP02775 128 aa9.49□□□□□ -0.89
PTPN7-202ENST00000367279 BOD1L2Q8IYS8 172 aa9.49□□□□□ -0.89
PTPN7-202ENST00000367279 M0R381 172 aa9.49□□□□□ -0.89
PTPN7-202ENST00000367279 IGHV3-11P01762 117 aa9.49□□□□□ -0.89
PTPN7-202ENST00000367279 FCER1GP30273 86 aa9.49□□□□□ -0.89
PTPN7-202ENST00000367279 GLMPQ8WWB7 406 aa9.49□□□□□ -0.89
PTPN7-202ENST00000367279 NXT2Q9NPJ8 142 aaKnown RBP9.49□□□□□ -0.89
PTPN7-202ENST00000367279 K7EMI3 77 aa9.48□□□□□ -0.89
PTPN7-202ENST00000367279 NPFFO15130 113 aa9.48□□□□□ -0.89
PTPN7-202ENST00000367279 RAB9AP51151 201 aa9.48□□□□□ -0.89
PTPN7-202ENST00000367279 HSD52Q0P140 79 aa9.48□□□□□ -0.89
PTPN7-202ENST00000367279 CLPSL1A2RUU4 121 aa9.48□□□□□ -0.89
PTPN7-202ENST00000367279 S100A4P26447 101 aaKnown RBP9.48□□□□□ -0.89
PTPN7-202ENST00000367279 OR2K2Q8NGT1 345 aa9.48□□□□□ -0.89
PTPN7-202ENST00000367279 DEFB104AQ8WTQ1 72 aa9.48□□□□□ -0.89
PTPN7-202ENST00000367279 IGKV2D-26A0A0A0MRZ7 120 aa9.48□□□□□ -0.89
PTPN7-202ENST00000367279 IGF1P05019 195 aa9.48□□□□□ -0.89
PTPN7-202ENST00000367279 LINC01559Q495D7 138 aa9.48□□□□□ -0.89
PTPN7-202ENST00000367279 OCIAD2Q56VL3 154 aa9.48□□□□□ -0.89
PTPN7-202ENST00000367279 ZNF575Q86XF7 245 aa9.48□□□□□ -0.89
PTPN7-202ENST00000367279 CELSR1Q9NYQ6 3014 aa9.47□□□□□ -0.89
PTPN7-202ENST00000367279 COL12A1Q99715 3063 aa9.47□□□□□ -0.89
PTPN7-202ENST00000367279 A0A0G2JLM5 398 aa9.47□□□□□ -0.89
PTPN7-202ENST00000367279 CENPVL3A0A0U1RRI6 287 aa9.47□□□□□ -0.89
PTPN7-202ENST00000367279 IGKCP01834 107 aa9.47□□□□□ -0.89
PTPN7-202ENST00000367279 ZC2HC1BQ5TFG8 222 aa9.47□□□□□ -0.89
PTPN7-202ENST00000367279 OR9G4Q8NGQ1 327 aa9.47□□□□□ -0.89
PTPN7-202ENST00000367279 MYOZ3Q8TDC0 251 aa9.47□□□□□ -0.89
PTPN7-202ENST00000367279 COL25A1Q9BXS0 654 aaPredicted RBP9.47□□□□□ -0.89
PTPN7-202ENST00000367279 TRAV8-2A0A0B4J237 113 aa9.47□□□□□ -0.89
PTPN7-202ENST00000367279 SMIM17P0DL12 118 aa9.47□□□□□ -0.89
PTPN7-202ENST00000367279 EFNA4P52798 201 aa9.47□□□□□ -0.89
PTPN7-202ENST00000367279 JMJD8Q96S16 334 aa9.47□□□□□ -0.89
PTPN7-202ENST00000367279 TRAV40A0A0B4J280 105 aa9.46□□□□□ -0.89
PTPN7-202ENST00000367279 TMEM8BA6NDV4 472 aa9.46□□□□□ -0.89
PTPN7-202ENST00000367279 ARL3P36405 182 aa9.46□□□□□ -0.89
PTPN7-202ENST00000367279 PAX8Q06710 450 aa9.46□□□□□ -0.89
PTPN7-202ENST00000367279 GTF2H5Q6ZYL4 71 aa9.46□□□□□ -0.89
PTPN7-202ENST00000367279 COX8CQ7Z4L0 72 aa9.46□□□□□ -0.89
PTPN7-202ENST00000367279 TRAV41A0A0B4J266 112 aa9.46□□□□□ -0.89
PTPN7-202ENST00000367279 MGPP08493 103 aa9.46□□□□□ -0.89
PTPN7-202ENST00000367279 ODF1Q14990 250 aa9.46□□□□□ -0.89
PTPN7-202ENST00000367279 OR4X2Q8NGF9 303 aa9.46□□□□□ -0.89
PTPN7-202ENST00000367279 C9orf118A6NHY6 69 aa9.46□□□□□ -0.9
PTPN7-202ENST00000367279 TRBV12-3P01733 135 aa9.46□□□□□ -0.9
PTPN7-202ENST00000367279 LCNL1Q6ZST4 164 aa9.46□□□□□ -0.9
PTPN7-202ENST00000367279 SRD5A1P18405 259 aa9.45□□□□□ -0.9
PTPN7-202ENST00000367279 CDKN1BP46527 198 aa9.45□□□□□ -0.9
PTPN7-202ENST00000367279 UCNP55089 124 aa9.45□□□□□ -0.9
PTPN7-202ENST00000367279 ARL6IP6Q8N6S5 226 aa9.45□□□□□ -0.9
PTPN7-202ENST00000367279 TRBV7-1A0A0A6YYK4 115 aa9.45□□□□□ -0.9
PTPN7-202ENST00000367279 H3BRM9 83 aa9.45□□□□□ -0.9
PTPN7-202ENST00000367279 K7ERJ3 54 aa9.45□□□□□ -0.9
PTPN7-202ENST00000367279 Q8N8P6 123 aa9.45□□□□□ -0.9
PTPN7-202ENST00000367279 WFDC12Q8WWY7 111 aa9.45□□□□□ -0.9
PTPN7-202ENST00000367279 DPF1Q92782 380 aa9.45□□□□□ -0.9
PTPN7-202ENST00000367279 MRPL35Q9NZE8 188 aaKnown RBP9.45□□□□□ -0.9
PTPN7-202ENST00000367279 SAP30O75446 220 aa9.44□□□□□ -0.9
PTPN7-202ENST00000367279 DPM2O94777 84 aa9.44□□□□□ -0.9
PTPN7-202ENST00000367279 C5orf56Q8N8D9 126 aa9.44□□□□□ -0.9
PTPN7-202ENST00000367279 CSPG4Q6UVK1 2322 aa9.44□□□□□ -0.9
PTPN7-202ENST00000367279 F6UB75 175 aa9.44□□□□□ -0.9
PTPN7-202ENST00000367279 LMO4P61968 165 aa9.44□□□□□ -0.9
PTPN7-202ENST00000367279 LAGE3Q14657 143 aa9.44□□□□□ -0.9
PTPN7-202ENST00000367279 PRR9Q5T870 116 aa9.44□□□□□ -0.9
PTPN7-202ENST00000367279 UNQ9165/PRO28630Q6UXU0 137 aa9.44□□□□□ -0.9
PTPN7-202ENST00000367279 ADAMTSL5Q6ZMM2 481 aa9.44□□□□□ -0.9
PTPN7-202ENST00000367279 AJUBAQ96IF1 538 aa9.44□□□□□ -0.9
PTPN7-202ENST00000367279 SPOCK3Q9BQ16 436 aa9.44□□□□□ -0.9
PTPN7-202ENST00000367279 SPCS1Q9Y6A9 102 aa9.44□□□□□ -0.9
PTPN7-202ENST00000367279 RBAKDNA6NC62 111 aa9.44□□□□□ -0.9
PTPN7-202ENST00000367279 PF4V1P10720 104 aa9.44□□□□□ -0.9
PTPN7-202ENST00000367279 C20orf173Q96LM9 149 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms