RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 COL4A3Q01955 1670 aa7.16□□□□□ -1.26
SYNE1-209ENST00000367257 NUPR1O60356 82 aa7.16□□□□□ -1.26
SYNE1-209ENST00000367257 MT-ATP8P03928 68 aa7.16□□□□□ -1.26
SYNE1-209ENST00000367257 HTN3P15516 51 aa7.16□□□□□ -1.26
SYNE1-209ENST00000367257 PIP4P2Q8N4L2 257 aa7.16□□□□□ -1.26
SYNE1-209ENST00000367257 IGHV1OR15-1A0A075B7D0 117 aa7.15□□□□□ -1.26
SYNE1-209ENST00000367257 VWC2Q2TAL6 325 aa7.15□□□□□ -1.26
SYNE1-209ENST00000367257 CREBBPQ92793 2442 aa7.15□□□□□ -1.26
SYNE1-209ENST00000367257 TRAV3A0A0B4J244 114 aa7.15□□□□□ -1.26
SYNE1-209ENST00000367257 FGF6P10767 208 aa7.15□□□□□ -1.26
SYNE1-209ENST00000367257 FXYD7P58549 80 aa7.15□□□□□ -1.26
SYNE1-209ENST00000367257 C10orf55Q5SWW7 151 aa7.15□□□□□ -1.26
SYNE1-209ENST00000367257 HS3ST6Q96QI5 342 aa7.15□□□□□ -1.26
SYNE1-209ENST00000367257 TP53TG1Q9Y2A0 90 aa7.15□□□□□ -1.26
SYNE1-209ENST00000367257 IGKV3D-20A0A0C4DH25 116 aa7.15□□□□□ -1.27
SYNE1-209ENST00000367257 SMIM9A6NGZ8 99 aa7.15□□□□□ -1.27
SYNE1-209ENST00000367257 SMIM2Q9BVW6 85 aa7.15□□□□□ -1.27
SYNE1-209ENST00000367257 CADP27708 2225 aa7.14□□□□□ -1.27
SYNE1-209ENST00000367257 CKAP5Q14008 2032 aa7.14□□□□□ -1.27
SYNE1-209ENST00000367257 IGFL3Q6UXB1 125 aa7.14□□□□□ -1.27
SYNE1-209ENST00000367257 SPACA3Q8IXA5 215 aa7.14□□□□□ -1.27
SYNE1-209ENST00000367257 C1orf159Q96HA4 380 aa7.14□□□□□ -1.27
SYNE1-209ENST00000367257 MYO15AQ9UKN7 3530 aa7.14□□□□□ -1.27
SYNE1-209ENST00000367257 DOCK10Q96BY6 2186 aa7.14□□□□□ -1.27
SYNE1-209ENST00000367257 TRIOO75962 3097 aa7.14□□□□□ -1.27
SYNE1-209ENST00000367257 PRR31Q5SQ13 230 aa7.14□□□□□ -1.27
SYNE1-209ENST00000367257 C20orf173Q96LM9 149 aa7.14□□□□□ -1.27
SYNE1-209ENST00000367257 PRR25Q96S07 402 aa7.14□□□□□ -1.27
SYNE1-209ENST00000367257 KAAG1Q9UBP8 84 aa7.14□□□□□ -1.27
SYNE1-209ENST00000367257 UQCRQO14949 82 aa7.14□□□□□ -1.27
SYNE1-209ENST00000367257 C1orf195Q5TG92 126 aa7.14□□□□□ -1.27
SYNE1-209ENST00000367257 UBE2DNLQ8IWF7 75 aa7.14□□□□□ -1.27
SYNE1-209ENST00000367257 LRRC75A-AS1Q8N1F1 130 aa7.14□□□□□ -1.27
SYNE1-209ENST00000367257 A0A087WV48 116 aa7.13□□□□□ -1.27
SYNE1-209ENST00000367257 H3BUX3 64 aa7.13□□□□□ -1.27
SYNE1-209ENST00000367257 FHL1Q13642 323 aa7.13□□□□□ -1.27
SYNE1-209ENST00000367257 CARD19Q96LW7 228 aa7.13□□□□□ -1.27
SYNE1-209ENST00000367257 SPTAN1Q13813 2472 aaKnown RBP7.13□□□□□ -1.27
SYNE1-209ENST00000367257 TP53BP1Q12888 1972 aaPredicted RBP7.13□□□□□ -1.27
SYNE1-209ENST00000367257 DNAH14Q0VDD8 3507 aa7.13□□□□□ -1.27
SYNE1-209ENST00000367257 LINC01619G3V211 115 aa7.13□□□□□ -1.27
SYNE1-209ENST00000367257 IGHV3OR16-8A0A075B7F1 116 aa7.13□□□□□ -1.27
SYNE1-209ENST00000367257 ZC2HC1AQ96GY0 325 aa7.13□□□□□ -1.27
SYNE1-209ENST00000367257 HELZP42694 1942 aaKnown RBP7.13□□□□□ -1.27
SYNE1-209ENST00000367257 CACNA1DQ01668 2161 aa7.13□□□□□ -1.27
SYNE1-209ENST00000367257 A0A0G2JRQ6 117 aa7.13□□□□□ -1.27
SYNE1-209ENST00000367257 PAX9P55771 341 aa7.13□□□□□ -1.27
SYNE1-209ENST00000367257 MRPL51Q4U2R6 128 aaKnown RBP7.13□□□□□ -1.27
SYNE1-209ENST00000367257 Q6ZRM9 215 aa7.13□□□□□ -1.27
SYNE1-209ENST00000367257 C5orf24Q7Z6I8 188 aa7.13□□□□□ -1.27
SYNE1-209ENST00000367257 NYNRINQ9P2P1 1898 aaKnown RBP7.13□□□□□ -1.27
SYNE1-209ENST00000367257 VCANP13611 3396 aa7.12□□□□□ -1.27
SYNE1-209ENST00000367257 A0A1B0GX51 115 aa7.12□□□□□ -1.27
SYNE1-209ENST00000367257 ELANEP08246 267 aa7.12□□□□□ -1.27
SYNE1-209ENST00000367257 LTAP01374 205 aa7.12□□□□□ -1.27
SYNE1-209ENST00000367257 IGLV3-1P01715 115 aa7.12□□□□□ -1.27
SYNE1-209ENST00000367257 APOC4P55056 127 aa7.12□□□□□ -1.27
SYNE1-209ENST00000367257 A0A0U1RQV1 116 aa7.12□□□□□ -1.27
SYNE1-209ENST00000367257 TMEM105Q8N8V8 129 aa7.12□□□□□ -1.27
SYNE1-209ENST00000367257 C1orf147Q96MC9 270 aaPredicted RBP7.12□□□□□ -1.27
SYNE1-209ENST00000367257 SPATA25Q9BR10 227 aa7.12□□□□□ -1.27
SYNE1-209ENST00000367257 PRDM6Q9NQX0 595 aa7.12□□□□□ -1.27
SYNE1-209ENST00000367257 ZNF561-AS1K7EIQ3 104 aa7.12□□□□□ -1.27
SYNE1-209ENST00000367257 FOXE3Q13461 319 aa7.12□□□□□ -1.27
SYNE1-209ENST00000367257 SHISA2Q6UWI4 295 aa7.12□□□□□ -1.27
SYNE1-209ENST00000367257 IGFBPL1Q8WX77 278 aa7.12□□□□□ -1.27
SYNE1-209ENST00000367257 DSCR8Q96T75 97 aa7.12□□□□□ -1.27
SYNE1-209ENST00000367257 NDUFA12Q9UI09 145 aa7.12□□□□□ -1.27
SYNE1-209ENST00000367257 U3KQE9 123 aa7.12□□□□□ -1.27
SYNE1-209ENST00000367257 DOPEY1Q5JWR5 2465 aa7.12□□□□□ -1.27
SYNE1-209ENST00000367257 IGHV3-64A0A075B6Q5 118 aa7.11□□□□□ -1.27
SYNE1-209ENST00000367257 INS-IGF2F8WCM5 200 aa7.11□□□□□ -1.27
SYNE1-209ENST00000367257 ZNF134P52741 427 aa7.11□□□□□ -1.27
SYNE1-209ENST00000367257 Q8TAT8 98 aa7.11□□□□□ -1.27
SYNE1-209ENST00000367257 A0A0G2JNJ9 132 aa7.11□□□□□ -1.27
SYNE1-209ENST00000367257 C5orf63A6NC05 138 aa7.11□□□□□ -1.27
SYNE1-209ENST00000367257 SDHAF1A6NFY7 115 aa7.11□□□□□ -1.27
SYNE1-209ENST00000367257 Q9UFV3 132 aa7.11□□□□□ -1.27
SYNE1-209ENST00000367257 H0YGX0 51 aa7.11□□□□□ -1.27
SYNE1-209ENST00000367257 PRR20EP86478 221 aa7.11□□□□□ -1.27
SYNE1-209ENST00000367257 PRR20CP86479 221 aa7.11□□□□□ -1.27
SYNE1-209ENST00000367257 PRR20DP86480 221 aa7.11□□□□□ -1.27
SYNE1-209ENST00000367257 PRR20BP86481 221 aa7.11□□□□□ -1.27
SYNE1-209ENST00000367257 PRR20AP86496 221 aa7.11□□□□□ -1.27
SYNE1-209ENST00000367257 ZNF726P1Q15940 193 aa7.11□□□□□ -1.27
SYNE1-209ENST00000367257 CNOT1A5YKK6 2376 aaKnown RBP7.11□□□□□ -1.27
SYNE1-209ENST00000367257 IGKV1-6A0A0C4DH72 117 aa7.11□□□□□ -1.27
SYNE1-209ENST00000367257 IGHV1-69P01742 117 aa7.11□□□□□ -1.27
SYNE1-209ENST00000367257 MORN5Q5VZ52 161 aa7.11□□□□□ -1.27
SYNE1-209ENST00000367257 NKAPP1Q8N9T2 125 aa7.11□□□□□ -1.27
SYNE1-209ENST00000367257 A0A1W2PRX2 142 aa7.1□□□□□ -1.27
SYNE1-209ENST00000367257 IGLV1-44P01699 117 aa7.1□□□□□ -1.27
SYNE1-209ENST00000367257 ODF1Q14990 250 aa7.1□□□□□ -1.27
SYNE1-209ENST00000367257 TMEM219Q86XT9 240 aa7.1□□□□□ -1.27
SYNE1-209ENST00000367257 IGLV3-9A0A075B6K5 115 aa7.1□□□□□ -1.27
SYNE1-209ENST00000367257 MED14OSP0DP75 135 aa7.1□□□□□ -1.27
SYNE1-209ENST00000367257 C11orf44Q8N8P7 122 aa7.1□□□□□ -1.27
SYNE1-209ENST00000367257 SCN2AQ99250 2005 aa7.1□□□□□ -1.27
SYNE1-209ENST00000367257 RIF1Q5UIP0 2472 aaKnown RBP7.1□□□□□ -1.27
SYNE1-209ENST00000367257 J3QQQ9 107 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms