RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 PTPRQQ9UMZ3 2332 aa6.37□□□□□ -1.39
CD46-208ENST00000367042 TRBV6-1A0A0K0K1D8 114 aa6.37□□□□□ -1.39
CD46-208ENST00000367042 G3V4G9 280 aa6.37□□□□□ -1.39
CD46-208ENST00000367042 H3BVH4 76 aa6.37□□□□□ -1.39
CD46-208ENST00000367042 MGPP08493 103 aa6.37□□□□□ -1.39
CD46-208ENST00000367042 ARL3P36405 182 aa6.37□□□□□ -1.39
CD46-208ENST00000367042 SAMD13Q5VXD3 122 aa6.37□□□□□ -1.39
CD46-208ENST00000367042 UFSP1Q6NVU6 142 aa6.37□□□□□ -1.39
CD46-208ENST00000367042 CFHR4Q92496 578 aa6.37□□□□□ -1.39
CD46-208ENST00000367042 ZNF479Q96JC4 524 aa6.37□□□□□ -1.39
CD46-208ENST00000367042 SPG11Q96JI7 2443 aa6.36□□□□□ -1.39
CD46-208ENST00000367042 IGLV11-55A0A075B6I3 123 aa6.36□□□□□ -1.39
CD46-208ENST00000367042 H3BMG7 143 aa6.36□□□□□ -1.39
CD46-208ENST00000367042 MRPS12O15235 138 aaKnown RBP6.36□□□□□ -1.39
CD46-208ENST00000367042 ODF1Q14990 250 aa6.36□□□□□ -1.39
CD46-208ENST00000367042 OVOL3O00110 214 aa6.36□□□□□ -1.39
CD46-208ENST00000367042 ETDBQ3ZM63 59 aa6.36□□□□□ -1.39
CD46-208ENST00000367042 ZNF562Q6V9R5 426 aa6.36□□□□□ -1.39
CD46-208ENST00000367042 SCGB1D4Q6XE38 83 aa6.36□□□□□ -1.39
CD46-208ENST00000367042 DPF1Q92782 380 aa6.36□□□□□ -1.39
CD46-208ENST00000367042 RNF5Q99942 180 aa6.36□□□□□ -1.39
CD46-208ENST00000367042 DCHS2Q6V1P9 2916 aa6.36□□□□□ -1.39
CD46-208ENST00000367042 SIVA1O15304 175 aa6.35□□□□□ -1.39
CD46-208ENST00000367042 CTSGP08311 255 aa6.35□□□□□ -1.39
CD46-208ENST00000367042 TTC9CQ8N5M4 171 aa6.35□□□□□ -1.39
CD46-208ENST00000367042 MUC6Q6W4X9 2439 aa6.35□□□□□ -1.39
CD46-208ENST00000367042 J3QR89 54 aa6.35□□□□□ -1.39
CD46-208ENST00000367042 SH2D6Q7Z4S9 175 aa6.35□□□□□ -1.39
CD46-208ENST00000367042 RNF185Q96GF1 192 aa6.35□□□□□ -1.39
CD46-208ENST00000367042 C16orf92Q96LL3 132 aa6.35□□□□□ -1.39
CD46-208ENST00000367042 CYSLTR1Q9Y271 337 aa6.35□□□□□ -1.39
CD46-208ENST00000367042 U3KQK5 164 aa6.35□□□□□ -1.39
CD46-208ENST00000367042 ATP5LO75964 103 aa6.35□□□□□ -1.39
CD46-208ENST00000367042 LAGE3Q14657 143 aa6.35□□□□□ -1.39
CD46-208ENST00000367042 CCDC144NLQ6NUI1 221 aa6.35□□□□□ -1.39
CD46-208ENST00000367042 Q6ZQT7 251 aa6.35□□□□□ -1.39
CD46-208ENST00000367042 VMO1Q7Z5L0 202 aa6.35□□□□□ -1.39
CD46-208ENST00000367042 ZNF502Q8TBZ5 544 aa6.35□□□□□ -1.39
CD46-208ENST00000367042 SRSF8Q9BRL6 282 aaKnown RBP6.35□□□□□ -1.39
CD46-208ENST00000367042 SMAD5-AS1Q9Y6J3 95 aa6.35□□□□□ -1.39
CD46-208ENST00000367042 LOC107984156A0A0G2JMH3 177 aa6.34□□□□□ -1.39
CD46-208ENST00000367042 OR11H12B2RN74 326 aa6.34□□□□□ -1.39
CD46-208ENST00000367042 G3V318 75 aa6.34□□□□□ -1.39
CD46-208ENST00000367042 WFDC2Q14508 124 aa6.34□□□□□ -1.39
CD46-208ENST00000367042 ARL17AQ8IVW1 177 aa6.34□□□□□ -1.39
CD46-208ENST00000367042 OR11H1Q8NG94 326 aa6.34□□□□□ -1.39
CD46-208ENST00000367042 OR11H2Q8NH07 326 aa6.34□□□□□ -1.39
CD46-208ENST00000367042 TSSC4Q9Y5U2 329 aaPredicted RBP6.34□□□□□ -1.39
CD46-208ENST00000367042 IGHV3OR16-10A0A075B7F0 116 aa6.34□□□□□ -1.39
CD46-208ENST00000367042 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.34□□□□□ -1.39
CD46-208ENST00000367042 CCL21O00585 134 aa6.34□□□□□ -1.39
CD46-208ENST00000367042 IGLC6P0CF74 106 aa6.34□□□□□ -1.39
CD46-208ENST00000367042 SRSF9Q13242 221 aaKnown RBP eCLIP6.34□□□□□ -1.39
CD46-208ENST00000367042 CEND1Q8N111 149 aa6.34□□□□□ -1.39
CD46-208ENST00000367042 GLMPQ8WWB7 406 aa6.34□□□□□ -1.39
CD46-208ENST00000367042 TGFAP01135 160 aa6.33□□□□□ -1.4
CD46-208ENST00000367042 EMP1P54849 157 aa6.33□□□□□ -1.4
CD46-208ENST00000367042 GATD1Q8NB37 220 aa6.33□□□□□ -1.4
CD46-208ENST00000367042 SCGB3A1Q96QR1 104 aa6.33□□□□□ -1.4
CD46-208ENST00000367042 VKORC1Q9BQB6 163 aa6.33□□□□□ -1.4
CD46-208ENST00000367042 AGPAT4-IT1Q9H0P7 198 aa6.33□□□□□ -1.4
CD46-208ENST00000367042 A0A1B0GWB2 263 aa6.33□□□□□ -1.4
CD46-208ENST00000367042 F8W735 103 aaPredicted RBP6.33□□□□□ -1.4
CD46-208ENST00000367042 LY6LH3BQJ8 138 aa6.33□□□□□ -1.4
CD46-208ENST00000367042 AZU1P20160 251 aa6.33□□□□□ -1.4
CD46-208ENST00000367042 FOXC1Q12948 553 aa6.33□□□□□ -1.4
CD46-208ENST00000367042 MAPKAPK5-AS1Q8N8E1 139 aa6.33□□□□□ -1.4
CD46-208ENST00000367042 Q8N8P6 123 aa6.33□□□□□ -1.4
CD46-208ENST00000367042 METTL26Q96S19 204 aa6.33□□□□□ -1.4
CD46-208ENST00000367042 IGKV3D-20A0A0C4DH25 116 aa6.33□□□□□ -1.4
CD46-208ENST00000367042 DEFB1P60022 68 aa6.33□□□□□ -1.4
CD46-208ENST00000367042 Q8NA96 180 aa6.33□□□□□ -1.4
CD46-208ENST00000367042 HHLA3Q9XRX5 114 aa6.33□□□□□ -1.4
CD46-208ENST00000367042 ATP6V0E1O15342 81 aa6.32□□□□□ -1.4
CD46-208ENST00000367042 NBL1P41271 181 aa6.32□□□□□ -1.4
CD46-208ENST00000367042 SRSF1Q07955 248 aaKnown RBP eCLIP6.32□□□□□ -1.44e-6■■■□□ 17.3
CD46-208ENST00000367042 SIGMAR1Q99720 223 aa6.32□□□□□ -1.4
CD46-208ENST00000367042 MRPL16Q9NX20 251 aaKnown RBP6.32□□□□□ -1.4
CD46-208ENST00000367042 PHLDA3Q9Y5J5 127 aa6.32□□□□□ -1.4
CD46-208ENST00000367042 APOMO95445 188 aa6.32□□□□□ -1.4
CD46-208ENST00000367042 PRTN3P24158 256 aa6.32□□□□□ -1.4
CD46-208ENST00000367042 NEGR1Q7Z3B1 354 aa6.32□□□□□ -1.4
CD46-208ENST00000367042 TMEM219Q86XT9 240 aa6.32□□□□□ -1.4
CD46-208ENST00000367042 C14orf178Q8N769 122 aaPredicted RBP6.32□□□□□ -1.4
CD46-208ENST00000367042 ZNF418Q8TF45 676 aaPredicted RBP6.32□□□□□ -1.4
CD46-208ENST00000367042 WFDC12Q8WWY7 111 aa6.32□□□□□ -1.4
CD46-208ENST00000367042 C11orf21Q9P2W6 132 aa6.32□□□□□ -1.4
CD46-208ENST00000367042 IGHV7-81A0A0B4J1V7 117 aa6.32□□□□□ -1.4
CD46-208ENST00000367042 NPBQ8NG41 125 aa6.32□□□□□ -1.4
CD46-208ENST00000367042 RAXQ9Y2V3 346 aa6.32□□□□□ -1.4
CD46-208ENST00000367042 IGLL5B9A064 214 aa6.31□□□□□ -1.4
CD46-208ENST00000367042 IGHG4P01861 327 aa6.31□□□□□ -1.4
CD46-208ENST00000367042 C12orf74Q32Q52 190 aa6.31□□□□□ -1.4
CD46-208ENST00000367042 GAGE13Q4V321 117 aa6.31□□□□□ -1.4
CD46-208ENST00000367042 OR11H6Q8NGC7 330 aa6.31□□□□□ -1.4
CD46-208ENST00000367042 SMPXQ9UHP9 88 aa6.31□□□□□ -1.4
CD46-208ENST00000367042 CHTOPQ9Y3Y2 248 aaKnown RBP6.31□□□□□ -1.4
CD46-208ENST00000367042 SORL1Q92673 2214 aa6.31□□□□□ -1.4
CD46-208ENST00000367042 F5H697 171 aa6.31□□□□□ -1.4
CD46-208ENST00000367042 BUB3O43684 328 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms