RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 LINC01620Q4KN68 170 aa13.29□□□□□ -0.28
NID1-202ENST00000366595 TRAV4A0A0B4J268 109 aa13.29□□□□□ -0.28
NID1-202ENST00000366595 TDRD6O60522 2096 aaKnown RBP13.29□□□□□ -0.28
NID1-202ENST00000366595 J3QLI3 93 aa13.29□□□□□ -0.28
NID1-202ENST00000366595 ELANEP08246 267 aa13.29□□□□□ -0.28
NID1-202ENST00000366595 SEC61GP60059 68 aa13.29□□□□□ -0.28
NID1-202ENST00000366595 DOPEY2Q9Y3R5 2298 aa13.28□□□□□ -0.28
NID1-202ENST00000366595 HIGD1BQ9P298 99 aa13.28□□□□□ -0.28
NID1-202ENST00000366595 TRAV12-2A0A075B6T6 113 aa13.28□□□□□ -0.28
NID1-202ENST00000366595 IGKV1-39P01597 117 aa13.28□□□□□ -0.28
NID1-202ENST00000366595 IGKV1D-39P04432 117 aa13.28□□□□□ -0.28
NID1-202ENST00000366595 RNF152Q8N8N0 203 aa13.28□□□□□ -0.28
NID1-202ENST00000366595 IGF2BP2-AS1Q96M15 143 aa13.28□□□□□ -0.28
NID1-202ENST00000366595 ARHGEF17Q96PE2 2063 aaPredicted RBP13.28□□□□□ -0.28
NID1-202ENST00000366595 DEFB105AQ8NG35 78 aa13.28□□□□□ -0.28
NID1-202ENST00000366595 PRDM6Q9NQX0 595 aa13.28□□□□□ -0.28
NID1-202ENST00000366595 COL18A1P39060 1754 aa13.28□□□□□ -0.28
NID1-202ENST00000366595 Q71RC1 249 aaPredicted RBP13.27□□□□□ -0.28
NID1-202ENST00000366595 LRRK1Q38SD2 2015 aa13.27□□□□□ -0.28
NID1-202ENST00000366595 INTS1Q8N201 2190 aaKnown RBP13.27□□□□□ -0.29
NID1-202ENST00000366595 PDE6GP18545 87 aa13.27□□□□□ -0.29
NID1-202ENST00000366595 SH2D6Q7Z4S9 175 aa13.27□□□□□ -0.29
NID1-202ENST00000366595 MUSTN1Q8IVN3 82 aa13.27□□□□□ -0.29
NID1-202ENST00000366595 SND1-IT1Q9HBX3 110 aa13.27□□□□□ -0.29
NID1-202ENST00000366595 ADAMTS7Q9UKP4 1686 aa13.27□□□□□ -0.29
NID1-202ENST00000366595 E7EQL1 145 aa13.27□□□□□ -0.29
NID1-202ENST00000366595 H3BT86 120 aa13.27□□□□□ -0.29
NID1-202ENST00000366595 CD59P13987 128 aa13.27□□□□□ -0.29
NID1-202ENST00000366595 PRR20EP86478 221 aa13.27□□□□□ -0.29
NID1-202ENST00000366595 PRR20CP86479 221 aa13.27□□□□□ -0.29
NID1-202ENST00000366595 PRR20DP86480 221 aa13.27□□□□□ -0.29
NID1-202ENST00000366595 PRR20BP86481 221 aa13.27□□□□□ -0.29
NID1-202ENST00000366595 PRR20AP86496 221 aa13.27□□□□□ -0.29
NID1-202ENST00000366595 DOCK4Q8N1I0 1966 aa13.27□□□□□ -0.29
NID1-202ENST00000366595 PCP2Q8IVA1 136 aa13.26□□□□□ -0.29
NID1-202ENST00000366595 ABCA1O95477 2261 aa13.26□□□□□ -0.29
NID1-202ENST00000366595 PROP1O75360 226 aa13.26□□□□□ -0.29
NID1-202ENST00000366595 XCL1P47992 114 aa13.26□□□□□ -0.29
NID1-202ENST00000366595 DUX4L9Q6RFH8 374 aaPredicted RBP13.26□□□□□ -0.29
NID1-202ENST00000366595 Q6ZS92 163 aa13.26□□□□□ -0.29
NID1-202ENST00000366595 ATP6V0E2Q8NHE4 81 aa13.26□□□□□ -0.29
NID1-202ENST00000366595 TRIOBPQ9H2D6 2365 aa13.26□□□□□ -0.29
NID1-202ENST00000366595 WT1-ASQ06250 92 aa13.26□□□□□ -0.29
NID1-202ENST00000366595 LY6DQ14210 128 aa13.26□□□□□ -0.29
NID1-202ENST00000366595 G3V318 75 aa13.26□□□□□ -0.29
NID1-202ENST00000366595 TAX1BP3O14907 124 aa13.25□□□□□ -0.29
NID1-202ENST00000366595 C14orf132Q9NPU4 83 aa13.25□□□□□ -0.29
NID1-202ENST00000366595 BUB3O43684 328 aa13.25□□□□□ -0.29
NID1-202ENST00000366595 IGKV2D-24A0A075B6R9 120 aa13.24□□□□□ -0.29
NID1-202ENST00000366595 IGKV3D-7A0A0C4DH55 119 aa13.24□□□□□ -0.29
NID1-202ENST00000366595 C17orf58Q2M2W7 97 aa13.24□□□□□ -0.29
NID1-202ENST00000366595 FAM120AOSQ5T036 256 aa13.24□□□□□ -0.29
NID1-202ENST00000366595 TMEM105Q8N8V8 129 aa13.24□□□□□ -0.29
NID1-202ENST00000366595 COX7B2Q8TF08 81 aa13.24□□□□□ -0.29
NID1-202ENST00000366595 Q0VFX4 171 aa13.24□□□□□ -0.29
NID1-202ENST00000366595 ZNF236Q9UL36 1845 aa13.24□□□□□ -0.29
NID1-202ENST00000366595 CEP290O15078 2479 aa13.24□□□□□ -0.29
NID1-202ENST00000366595 RUSC1-AS1Q66K80 236 aa13.24□□□□□ -0.29
NID1-202ENST00000366595 SCN2AQ99250 2005 aa13.24□□□□□ -0.29
NID1-202ENST00000366595 MRPL36Q9P0J6 103 aaKnown RBP13.23□□□□□ -0.29
NID1-202ENST00000366595 MRPL55Q7Z7F7 128 aaKnown RBP13.23□□□□□ -0.29
NID1-202ENST00000366595 ZNF503Q96F45 646 aa13.23□□□□□ -0.29
NID1-202ENST00000366595 TRBV10-2A0A0K0K1G8 114 aa13.22□□□□□ -0.29
NID1-202ENST00000366595 GNLYP22749 145 aa13.22□□□□□ -0.29
NID1-202ENST00000366595 DOCK5Q9H7D0 1870 aa13.22□□□□□ -0.29
NID1-202ENST00000366595 A4D1N5 150 aa13.22□□□□□ -0.29
NID1-202ENST00000366595 ZNF491Q8N8L2 437 aa13.22□□□□□ -0.29
NID1-202ENST00000366595 LOXP28300 417 aaPredicted RBP13.22□□□□□ -0.29
NID1-202ENST00000366595 FOXI1Q12951 378 aa13.22□□□□□ -0.29
NID1-202ENST00000366595 RNASE13Q5GAN3 156 aaKnown RBP13.22□□□□□ -0.29
NID1-202ENST00000366595 LYPD6BQ8NI32 183 aa13.22□□□□□ -0.29
NID1-202ENST00000366595 CEP250Q9BV73 2442 aa13.22□□□□□ -0.29
NID1-202ENST00000366595 IGKV1OR2-108A0A075B7D4 117 aa13.22□□□□□ -0.29
NID1-202ENST00000366595 K7EN84 100 aa13.22□□□□□ -0.29
NID1-202ENST00000366595 CAMK2N2Q96S95 79 aa13.22□□□□□ -0.29
NID1-202ENST00000366595 FREM3P0C091 2139 aa13.21□□□□□ -0.29
NID1-202ENST00000366595 DOCK9Q9BZ29 2069 aa13.21□□□□□ -0.29
NID1-202ENST00000366595 U3KQE9 123 aa13.21□□□□□ -0.29
NID1-202ENST00000366595 C1orf147Q96MC9 270 aaPredicted RBP13.21□□□□□ -0.3
NID1-202ENST00000366595 SPTBN1Q01082 2364 aaKnown RBP13.21□□□□□ -0.3
NID1-202ENST00000366595 CXCL5P42830 114 aa13.2□□□□□ -0.3
NID1-202ENST00000366595 HIST2H2BCQ6DN03 193 aa13.2□□□□□ -0.3
NID1-202ENST00000366595 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.2□□□□□ -0.3
NID1-202ENST00000366595 IGKV2-29A2NJV5 120 aaPredicted RBP13.2□□□□□ -0.3
NID1-202ENST00000366595 ETV2O00321 342 aaPredicted RBP13.2□□□□□ -0.3
NID1-202ENST00000366595 TIRAPP58753 221 aa13.2□□□□□ -0.3
NID1-202ENST00000366595 DAZ2Q13117 558 aaKnown RBP13.2□□□□□ -0.3
NID1-202ENST00000366595 DAZ4Q86SG3 579 aaKnown RBP13.2□□□□□ -0.3
NID1-202ENST00000366595 DAZ3Q9NR90 486 aaKnown RBP13.2□□□□□ -0.3
NID1-202ENST00000366595 COX7A2LO14548 114 aa13.2□□□□□ -0.3
NID1-202ENST00000366595 AGPAT4-IT1Q9H0P7 198 aa13.2□□□□□ -0.3
NID1-202ENST00000366595 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.2□□□□□ -0.3
NID1-202ENST00000366595 HIGD2BQ4VC39 106 aa13.2□□□□□ -0.3
NID1-202ENST00000366595 BRK1Q8WUW1 75 aa13.2□□□□□ -0.3
NID1-202ENST00000366595 CLPSL2Q6UWE3 100 aa13.19□□□□□ -0.3
NID1-202ENST00000366595 C15orf65H3BRN8 121 aa13.19□□□□□ -0.3
NID1-202ENST00000366595 ZNRD1Q9P1U0 126 aa13.19□□□□□ -0.3
NID1-202ENST00000366595 ATAD5Q96QE3 1844 aa13.19□□□□□ -0.3
NID1-202ENST00000366595 CRYGBP07316 175 aa13.18□□□□□ -0.3
NID1-202ENST00000366595 IGHV4-28A0A0C4DH34 117 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms