RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 OR10G8Q8NGN5 311 aa18.41■□□□□ 0.54
SHARPIN-201ENST00000359551 CLUHP3Q96NS8 147 aa18.41■□□□□ 0.54
SHARPIN-201ENST00000359551 RNASE7Q9H1E1 156 aaKnown RBP18.41■□□□□ 0.54
SHARPIN-201ENST00000359551 SCO1O75880 301 aa18.4■□□□□ 0.54
SHARPIN-201ENST00000359551 AMTNQ6UX39 209 aa18.4■□□□□ 0.54
SHARPIN-201ENST00000359551 ZNF80P51504 273 aaPredicted RBP18.39■□□□□ 0.53
SHARPIN-201ENST00000359551 C15orf54Q8N8G6 183 aa18.39■□□□□ 0.53
SHARPIN-201ENST00000359551 NUDT10Q8NFP7 164 aa18.39■□□□□ 0.53
SHARPIN-201ENST00000359551 OR4B1Q8NGF8 309 aa18.39■□□□□ 0.53
SHARPIN-201ENST00000359551 NUDT11Q96G61 164 aa18.39■□□□□ 0.53
SHARPIN-201ENST00000359551 V9GYV3 84 aa18.38■□□□□ 0.53
SHARPIN-201ENST00000359551 KLLNB2CW77 178 aa18.38■□□□□ 0.53
SHARPIN-201ENST00000359551 H7BYZ3 331 aa18.38■□□□□ 0.53
SHARPIN-201ENST00000359551 FAM162BQ5T6X4 162 aa18.38■□□□□ 0.53
SHARPIN-201ENST00000359551 LEPP41159 167 aa18.37■□□□□ 0.53
SHARPIN-201ENST00000359551 PRR9Q5T870 116 aa18.37■□□□□ 0.53
SHARPIN-201ENST00000359551 ANK2Q01484 3957 aa18.36■□□□□ 0.53
SHARPIN-201ENST00000359551 RBMY1BA6NDE4 496 aaKnown RBP18.35■□□□□ 0.53
SHARPIN-201ENST00000359551 RBMY1EA6NEQ0 496 aaKnown RBP18.35■□□□□ 0.53
SHARPIN-201ENST00000359551 SH2D1AO60880 128 aa18.35■□□□□ 0.53
SHARPIN-201ENST00000359551 IGKV3-20P01619 116 aa18.35■□□□□ 0.53
SHARPIN-201ENST00000359551 RBMY1DP0C7P1 496 aaKnown RBP18.35■□□□□ 0.53
SHARPIN-201ENST00000359551 DAZAP1Q96EP5 407 aaKnown RBP18.35■□□□□ 0.53
SHARPIN-201ENST00000359551 FABP5P3A8MUU1 101 aa18.34■□□□□ 0.53
SHARPIN-201ENST00000359551 P01737 135 aa18.34■□□□□ 0.53
SHARPIN-201ENST00000359551 PFN1P07737 140 aaKnown RBP18.34■□□□□ 0.53
SHARPIN-201ENST00000359551 TSPOP30536 169 aa18.34■□□□□ 0.53
SHARPIN-201ENST00000359551 TRPT1Q86TN4 253 aaKnown RBP18.34■□□□□ 0.53
SHARPIN-201ENST00000359551 GTSCR1Q86UQ5 136 aa18.34■□□□□ 0.53
SHARPIN-201ENST00000359551 CXorf65A6NEN9 183 aa18.34■□□□□ 0.53
SHARPIN-201ENST00000359551 GATCO43716 136 aaKnown RBP18.34■□□□□ 0.53
SHARPIN-201ENST00000359551 GPX1P07203 203 aa18.34■□□□□ 0.53
SHARPIN-201ENST00000359551 TUBA4BQ9H853 241 aa18.34■□□□□ 0.53
SHARPIN-201ENST00000359551 SMCO4Q9NRQ5 59 aa18.34■□□□□ 0.53
SHARPIN-201ENST00000359551 ZNF705GA8MUZ8 300 aaPredicted RBP18.33■□□□□ 0.52
SHARPIN-201ENST00000359551 CDKN1BP46527 198 aa18.33■□□□□ 0.52
SHARPIN-201ENST00000359551 OXLD1Q5BKU9 147 aa18.33■□□□□ 0.52
SHARPIN-201ENST00000359551 CT83Q5H943 113 aa18.33■□□□□ 0.52
SHARPIN-201ENST00000359551 Q6AWC8 147 aa18.33■□□□□ 0.52
SHARPIN-201ENST00000359551 TMEM88Q6PEY1 159 aa18.33■□□□□ 0.52
SHARPIN-201ENST00000359551 CBLN2Q8IUK8 224 aa18.33■□□□□ 0.52
SHARPIN-201ENST00000359551 STHQ8IWL8 128 aa18.33■□□□□ 0.52
SHARPIN-201ENST00000359551 WFDC10AQ9H1F0 79 aa18.33■□□□□ 0.52
SHARPIN-201ENST00000359551 RPP21Q9H633 154 aaKnown RBP18.33■□□□□ 0.52
SHARPIN-201ENST00000359551 KIR3DS1Q14943 382 aa18.32■□□□□ 0.52
SHARPIN-201ENST00000359551 IMMP2LQ96T52 175 aa18.31■□□□□ 0.52
SHARPIN-201ENST00000359551 M0R2Z0 102 aa18.31■□□□□ 0.52
SHARPIN-201ENST00000359551 EGFEM1PQ0D2K5 195 aa18.31■□□□□ 0.52
SHARPIN-201ENST00000359551 BTN1A1Q13410 526 aa18.31■□□□□ 0.52
SHARPIN-201ENST00000359551 SPINK13Q1W4C9 94 aa18.31■□□□□ 0.52
SHARPIN-201ENST00000359551 CMYA5Q8N3K9 4069 aa18.3■□□□□ 0.52
SHARPIN-201ENST00000359551 TRAV21A0A0B4J279 112 aa18.3■□□□□ 0.52
SHARPIN-201ENST00000359551 J3KRW8 73 aa18.3■□□□□ 0.52
SHARPIN-201ENST00000359551 IL36BQ9NZH7 164 aa18.3■□□□□ 0.52
SHARPIN-201ENST00000359551 RNASE4P34096 147 aaKnown RBP18.29■□□□□ 0.52
SHARPIN-201ENST00000359551 GFI1BQ5VTD9 330 aa18.29■□□□□ 0.52
SHARPIN-201ENST00000359551 Q8N1Y9 231 aa18.29■□□□□ 0.52
SHARPIN-201ENST00000359551 C7orf71A4D174 169 aa18.28■□□□□ 0.52
SHARPIN-201ENST00000359551 LINC01559Q495D7 138 aa18.28■□□□□ 0.52
SHARPIN-201ENST00000359551 Q6ZQT7 251 aa18.28■□□□□ 0.52
SHARPIN-201ENST00000359551 OR2D3Q8NGH3 330 aa18.28■□□□□ 0.52
SHARPIN-201ENST00000359551 CRXO43186 299 aaPredicted RBP18.28■□□□□ 0.52
SHARPIN-201ENST00000359551 CA1P00915 261 aaPredicted RBP18.28■□□□□ 0.52
SHARPIN-201ENST00000359551 YPEL4Q96NS1 127 aa18.28■□□□□ 0.52
SHARPIN-201ENST00000359551 C11orf21Q9P2W6 132 aa18.28■□□□□ 0.52
SHARPIN-201ENST00000359551 DEFB125Q8N687 156 aa18.27■□□□□ 0.52
SHARPIN-201ENST00000359551 TSKUQ8WUA8 353 aa18.27■□□□□ 0.52
SHARPIN-201ENST00000359551 SMIM27A0A1W2PRY6 76 aa18.26■□□□□ 0.51
SHARPIN-201ENST00000359551 A8MWL6 223 aa18.26■□□□□ 0.51
SHARPIN-201ENST00000359551 ZNF324O75467 553 aaPredicted RBP18.26■□□□□ 0.51
SHARPIN-201ENST00000359551 RPL19P84098 196 aaKnown RBP18.26■□□□□ 0.51
SHARPIN-201ENST00000359551 TRAV12-2A0A075B6T6 113 aa18.25■□□□□ 0.51
SHARPIN-201ENST00000359551 TMEM189A5PLL7 270 aa18.25■□□□□ 0.51
SHARPIN-201ENST00000359551 AMBPP02760 352 aa18.25■□□□□ 0.51
SHARPIN-201ENST00000359551 ZNF575Q86XF7 245 aa18.25■□□□□ 0.51
SHARPIN-201ENST00000359551 ZMAT5Q9UDW3 170 aaKnown RBP18.25■□□□□ 0.51
SHARPIN-201ENST00000359551 PKD1L1Q8TDX9 2849 aa18.25■□□□□ 0.51
SHARPIN-201ENST00000359551 IGKV3D-20A0A0C4DH25 116 aa18.25■□□□□ 0.51
SHARPIN-201ENST00000359551 FXYD7P58549 80 aa18.25■□□□□ 0.51
SHARPIN-201ENST00000359551 ELOBQ15370 118 aa18.25■□□□□ 0.51
SHARPIN-201ENST00000359551 GFRA4Q9GZZ7 299 aa18.25■□□□□ 0.51
SHARPIN-201ENST00000359551 TRAV12-3A0A0B4J271 114 aa18.24■□□□□ 0.51
SHARPIN-201ENST00000359551 FAM231BA6NCW3 169 aa18.24■□□□□ 0.51
SHARPIN-201ENST00000359551 ORM1P02763 201 aa18.24■□□□□ 0.51
SHARPIN-201ENST00000359551 S100PP25815 95 aa18.24■□□□□ 0.51
SHARPIN-201ENST00000359551 RPS20P60866 119 aaKnown RBP18.24■□□□□ 0.51
SHARPIN-201ENST00000359551 NUTF2P61970 127 aaKnown RBP18.24■□□□□ 0.51
SHARPIN-201ENST00000359551 SAMD5Q5TGI4 173 aa18.24■□□□□ 0.51
SHARPIN-201ENST00000359551 KCNIP4Q6PIL6 250 aa18.24■□□□□ 0.51
SHARPIN-201ENST00000359551 URGCP-MRPS24S4R325 110 aa18.24■□□□□ 0.51
SHARPIN-201ENST00000359551 KRTAP10-11P60412 298 aa18.23■□□□□ 0.51
SHARPIN-201ENST00000359551 XKRY2A2RUG3 117 aa18.22■□□□□ 0.51
SHARPIN-201ENST00000359551 GTSF1Q8WW33 167 aa18.22■□□□□ 0.51
SHARPIN-201ENST00000359551 NEU1Q99519 415 aa18.22■□□□□ 0.51
SHARPIN-201ENST00000359551 FAM3BP58499 235 aaPredicted RBP18.22■□□□□ 0.51
SHARPIN-201ENST00000359551 MORN3Q6PF18 240 aaPredicted RBP18.22■□□□□ 0.51
SHARPIN-201ENST00000359551 C20orf144Q9BQM9 153 aa18.22■□□□□ 0.51
SHARPIN-201ENST00000359551 TRAV9-1A0A075B6T8 112 aa18.21■□□□□ 0.51
SHARPIN-201ENST00000359551 G3V4G9 280 aa18.21■□□□□ 0.51
SHARPIN-201ENST00000359551 CXCL1P09341 107 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms