RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.08□□□□□ -1.28
COL6A6-201ENST00000358511 TMEM14CQ9P0S9 112 aa7.08□□□□□ -1.28
COL6A6-201ENST00000358511 SIGLEC9Q9Y336 463 aa7.08□□□□□ -1.28
COL6A6-201ENST00000358511 TRAV25A0A0B4J276 109 aa7.08□□□□□ -1.28
COL6A6-201ENST00000358511 EFNA2O43921 213 aa7.08□□□□□ -1.28
COL6A6-201ENST00000358511 CRYBA4P53673 196 aa7.08□□□□□ -1.28
COL6A6-201ENST00000358511 NKAPP1Q8N9T2 125 aa7.08□□□□□ -1.28
COL6A6-201ENST00000358511 TMEM200BQ69YZ2 307 aa7.08□□□□□ -1.28
COL6A6-201ENST00000358511 ZNF747Q9BV97 191 aa7.08□□□□□ -1.28
COL6A6-201ENST00000358511 TRAV13-1A0A0B4J241 112 aa7.08□□□□□ -1.28
COL6A6-201ENST00000358511 VWC2Q2TAL6 325 aa7.07□□□□□ -1.28
COL6A6-201ENST00000358511 PCP2Q8IVA1 136 aa7.07□□□□□ -1.28
COL6A6-201ENST00000358511 LTAP01374 205 aa7.07□□□□□ -1.28
COL6A6-201ENST00000358511 IGHV3-11P01762 117 aa7.07□□□□□ -1.28
COL6A6-201ENST00000358511 NDUFA4L2Q9NRX3 87 aa7.07□□□□□ -1.28
COL6A6-201ENST00000358511 IL17RELQ6ZVW7 336 aa7.07□□□□□ -1.28
COL6A6-201ENST00000358511 IGHV1-18A0A0C4DH31 117 aa7.07□□□□□ -1.28
COL6A6-201ENST00000358511 RPL35AP18077 110 aaKnown RBP7.07□□□□□ -1.28
COL6A6-201ENST00000358511 SH2D6Q7Z4S9 175 aa7.07□□□□□ -1.28
COL6A6-201ENST00000358511 C5orf24Q7Z6I8 188 aa7.07□□□□□ -1.28
COL6A6-201ENST00000358511 ATP6V0E2Q8NHE4 81 aa7.07□□□□□ -1.28
COL6A6-201ENST00000358511 A0A1W2PPI3 338 aa7.07□□□□□ -1.28
COL6A6-201ENST00000358511 ZC2HC1AQ96GY0 325 aa7.07□□□□□ -1.28
COL6A6-201ENST00000358511 DKK2Q9UBU2 259 aa7.07□□□□□ -1.28
COL6A6-201ENST00000358511 TRBV19A0A075B6N1 114 aa7.07□□□□□ -1.28
COL6A6-201ENST00000358511 SHISA9B4DS77 424 aa7.07□□□□□ -1.28
COL6A6-201ENST00000358511 WNT2P09544 360 aa7.07□□□□□ -1.28
COL6A6-201ENST00000358511 TRAV26-1A0A087WT03 109 aa7.07□□□□□ -1.28
COL6A6-201ENST00000358511 PRSS29PA6NIE9 313 aa7.06□□□□□ -1.28
COL6A6-201ENST00000358511 NDUFB8O95169 186 aa7.06□□□□□ -1.28
COL6A6-201ENST00000358511 C5orf64Q2M2E5 130 aa7.06□□□□□ -1.28
COL6A6-201ENST00000358511 MRPL55Q7Z7F7 128 aaKnown RBP7.06□□□□□ -1.28
COL6A6-201ENST00000358511 DKK4Q9UBT3 224 aa7.06□□□□□ -1.28
COL6A6-201ENST00000358511 A0A087WWL8 130 aa7.06□□□□□ -1.28
COL6A6-201ENST00000358511 IGHV3-73A0A0B4J1V6 119 aa7.06□□□□□ -1.28
COL6A6-201ENST00000358511 I3L3M4 83 aa7.06□□□□□ -1.28
COL6A6-201ENST00000358511 ATOX1O00244 68 aa7.06□□□□□ -1.28
COL6A6-201ENST00000358511 SMIM2Q9BVW6 85 aa7.06□□□□□ -1.28
COL6A6-201ENST00000358511 TRBV25-1A0A075B6N4 114 aa7.06□□□□□ -1.28
COL6A6-201ENST00000358511 FOXL2NBQ6ZUU3 175 aa7.06□□□□□ -1.28
COL6A6-201ENST00000358511 J3QQQ9 107 aa7.06□□□□□ -1.28
COL6A6-201ENST00000358511 FAM27E3Q08E93 113 aa7.06□□□□□ -1.28
COL6A6-201ENST00000358511 C1orf159Q96HA4 380 aa7.06□□□□□ -1.28
COL6A6-201ENST00000358511 UBE2E2Q96LR5 201 aa7.06□□□□□ -1.28
COL6A6-201ENST00000358511 METRNQ9UJH8 293 aa7.06□□□□□ -1.28
COL6A6-201ENST00000358511 C9orf106Q8NAJ2 232 aa7.06□□□□□ -1.28
COL6A6-201ENST00000358511 CACNA1AO00555 2505 aa7.06□□□□□ -1.28
COL6A6-201ENST00000358511 TRAV13-2A0A0B4J235 113 aa7.06□□□□□ -1.28
COL6A6-201ENST00000358511 TAX1BP3O14907 124 aa7.06□□□□□ -1.28
COL6A6-201ENST00000358511 EGR2P11161 476 aaPredicted RBP7.06□□□□□ -1.28
COL6A6-201ENST00000358511 LINC00205P59089 165 aa7.06□□□□□ -1.28
COL6A6-201ENST00000358511 RPL36AP83881 106 aaKnown RBP7.06□□□□□ -1.28
COL6A6-201ENST00000358511 RPL36ALQ969Q0 106 aaKnown RBP7.06□□□□□ -1.28
COL6A6-201ENST00000358511 IGHV1-46P01743 117 aa7.06□□□□□ -1.28
COL6A6-201ENST00000358511 ZNF493Q6ZR52 646 aa7.06□□□□□ -1.28
COL6A6-201ENST00000358511 C8orf86Q6ZUL3 223 aa7.06□□□□□ -1.28
COL6A6-201ENST00000358511 PTPRSQ13332 1948 aa7.05□□□□□ -1.28
COL6A6-201ENST00000358511 FXYD5Q96DB9 178 aa7.05□□□□□ -1.28
COL6A6-201ENST00000358511 HIGD1BQ9P298 99 aa7.05□□□□□ -1.28
COL6A6-201ENST00000358511 LRP4O75096 1905 aa7.05□□□□□ -1.28
COL6A6-201ENST00000358511 ADAMTS20P59510 1910 aa7.05□□□□□ -1.28
COL6A6-201ENST00000358511 SRSF2Q01130 221 aaKnown RBP7.05□□□□□ -1.28
COL6A6-201ENST00000358511 HS3ST6Q96QI5 342 aa7.05□□□□□ -1.28
COL6A6-201ENST00000358511 IGKV1D-17A0A075B6S4 117 aa7.05□□□□□ -1.28
COL6A6-201ENST00000358511 E9PLN8 166 aa7.05□□□□□ -1.28
COL6A6-201ENST00000358511 C8orf31Q8N9H6 132 aa7.05□□□□□ -1.28
COL6A6-201ENST00000358511 FAM236AA0A1B0GUQ0 79 aa7.05□□□□□ -1.28
COL6A6-201ENST00000358511 FAM236BA0A1B0GV22 79 aa7.05□□□□□ -1.28
COL6A6-201ENST00000358511 IGLL5B9A064 214 aa7.05□□□□□ -1.28
COL6A6-201ENST00000358511 BUB1B-PAK6H3BSN5 160 aa7.05□□□□□ -1.28
COL6A6-201ENST00000358511 COL5A1P20908 1838 aaPredicted RBP7.05□□□□□ -1.28
COL6A6-201ENST00000358511 C20orf78Q9BR46 151 aa7.05□□□□□ -1.28
COL6A6-201ENST00000358511 C6orf226Q5I0X4 101 aa7.05□□□□□ -1.28
COL6A6-201ENST00000358511 DSCR8Q96T75 97 aa7.05□□□□□ -1.28
COL6A6-201ENST00000358511 TMEM243Q9BU79 118 aa7.04□□□□□ -1.28
COL6A6-201ENST00000358511 UBE2BP63146 152 aa7.04□□□□□ -1.28
COL6A6-201ENST00000358511 COLCA1Q6ZS62 124 aa7.04□□□□□ -1.28
COL6A6-201ENST00000358511 FOXI1Q12951 378 aa7.04□□□□□ -1.28
COL6A6-201ENST00000358511 ATP1A1-AS1Q5TC04 95 aa7.04□□□□□ -1.28
COL6A6-201ENST00000358511 DEFB104AQ8WTQ1 72 aa7.04□□□□□ -1.28
COL6A6-201ENST00000358511 FAM168AQ92567 244 aa7.04□□□□□ -1.28
COL6A6-201ENST00000358511 SPRR3Q9UBC9 169 aa7.04□□□□□ -1.28
COL6A6-201ENST00000358511 FAM223BA6NKX1 122 aa7.04□□□□□ -1.28
COL6A6-201ENST00000358511 OOSP1A8MZH6 123 aa7.04□□□□□ -1.28
COL6A6-201ENST00000358511 THBDP07204 575 aa7.04□□□□□ -1.28
COL6A6-201ENST00000358511 FAM223AQ8IWN6 122 aa7.04□□□□□ -1.28
COL6A6-201ENST00000358511 NDUFA12Q9UI09 145 aa7.04□□□□□ -1.28
COL6A6-201ENST00000358511 SPAARA0A1B0GVQ0 90 aa7.04□□□□□ -1.28
COL6A6-201ENST00000358511 NTN5Q8WTR8 489 aaPredicted RBP7.04□□□□□ -1.28
COL6A6-201ENST00000358511 PRR25Q96S07 402 aa7.04□□□□□ -1.28
COL6A6-201ENST00000358511 IGKV1-39P01597 117 aa7.04□□□□□ -1.28
COL6A6-201ENST00000358511 IGKV1D-39P04432 117 aa7.04□□□□□ -1.28
COL6A6-201ENST00000358511 CSRP1P21291 193 aaKnown RBP7.04□□□□□ -1.28
COL6A6-201ENST00000358511 FOXG1P55316 489 aaPredicted RBP7.04□□□□□ -1.28
COL6A6-201ENST00000358511 SYNJ2BPP57105 145 aa7.04□□□□□ -1.28
COL6A6-201ENST00000358511 TRAV26-2A0A0B4J265 109 aa7.03□□□□□ -1.28
COL6A6-201ENST00000358511 NTN3O00634 580 aaPredicted RBP7.03□□□□□ -1.28
COL6A6-201ENST00000358511 ZNF561-AS1K7EIQ3 104 aa7.03□□□□□ -1.28
COL6A6-201ENST00000358511 LMO1P25800 156 aa7.03□□□□□ -1.28
COL6A6-201ENST00000358511 MINOS1Q5TGZ0 78 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms