RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 TRAV9-1A0A075B6T8 112 aa12.69□□□□□ -0.38
TPM1-205ENST00000357980 CRISP2P16562 243 aa12.69□□□□□ -0.38
TPM1-205ENST00000357980 CD33P20138 364 aa12.69□□□□□ -0.38
TPM1-205ENST00000357980 DEFB131AP59861 70 aa12.69□□□□□ -0.38
TPM1-205ENST00000357980 PRR9Q5T870 116 aa12.69□□□□□ -0.38
TPM1-205ENST00000357980 MAP6D1Q9H9H5 199 aa12.69□□□□□ -0.38
TPM1-205ENST00000357980 A8MWL6 223 aa12.68□□□□□ -0.38
TPM1-205ENST00000357980 TCL1AP56279 114 aa12.68□□□□□ -0.38
TPM1-205ENST00000357980 EBLN2Q6P2I7 272 aa12.68□□□□□ -0.38
TPM1-205ENST00000357980 APRG1Q8IVJ8 170 aa12.68□□□□□ -0.38
TPM1-205ENST00000357980 OR2D3Q8NGH3 330 aa12.68□□□□□ -0.38
TPM1-205ENST00000357980 OR2K2Q8NGT1 345 aa12.68□□□□□ -0.38
TPM1-205ENST00000357980 TYMSP04818 313 aa12.67□□□□□ -0.38
TPM1-205ENST00000357980 RPL19P84098 196 aaKnown RBP12.67□□□□□ -0.38
TPM1-205ENST00000357980 SPATA3Q8NHX4 192 aa12.67□□□□□ -0.38
TPM1-205ENST00000357980 ODF3Q96PU9 254 aa12.67□□□□□ -0.38
TPM1-205ENST00000357980 NEU1Q99519 415 aa12.67□□□□□ -0.38
TPM1-205ENST00000357980 FABP5P3A8MUU1 101 aa12.67□□□□□ -0.38
TPM1-205ENST00000357980 ODF3L2Q3SX64 289 aa12.67□□□□□ -0.38
TPM1-205ENST00000357980 GTSF1Q8WW33 167 aa12.67□□□□□ -0.38
TPM1-205ENST00000357980 ZNF747Q9BV97 191 aa12.67□□□□□ -0.38
TPM1-205ENST00000357980 GFRA4Q9GZZ7 299 aa12.67□□□□□ -0.38
TPM1-205ENST00000357980 TMA7Q9Y2S6 64 aaKnown RBP12.67□□□□□ -0.38
TPM1-205ENST00000357980 A8MTW9 85 aa12.66□□□□□ -0.38
TPM1-205ENST00000357980 DUSP14O95147 198 aaKnown RBP12.66□□□□□ -0.38
TPM1-205ENST00000357980 ZNF575Q86XF7 245 aa12.66□□□□□ -0.38
TPM1-205ENST00000357980 BTF3L4Q96K17 158 aa12.66□□□□□ -0.38
TPM1-205ENST00000357980 FAM231BA6NCW3 169 aa12.65□□□□□ -0.38
TPM1-205ENST00000357980 HIGD1CA8MV81 97 aa12.65□□□□□ -0.38
TPM1-205ENST00000357980 KLLNB2CW77 178 aa12.65□□□□□ -0.38
TPM1-205ENST00000357980 HLA-DRB4P13762 266 aa12.65□□□□□ -0.38
TPM1-205ENST00000357980 NUP35Q8NFH5 326 aa12.65□□□□□ -0.38
TPM1-205ENST00000357980 NAT8BQ9UHF3 227 aa12.65□□□□□ -0.38
TPM1-205ENST00000357980 HLA-DRB4X5D2U9 266 aa12.65□□□□□ -0.38
TPM1-205ENST00000357980 KNCNA6PVL3 124 aa12.65□□□□□ -0.39
TPM1-205ENST00000357980 GZMBP10144 247 aa12.65□□□□□ -0.39
TPM1-205ENST00000357980 KIR3DS1Q14943 382 aa12.65□□□□□ -0.39
TPM1-205ENST00000357980 ZNF124Q15973 351 aa12.65□□□□□ -0.39
TPM1-205ENST00000357980 LINC01559Q495D7 138 aa12.65□□□□□ -0.39
TPM1-205ENST00000357980 AMTNQ6UX39 209 aa12.65□□□□□ -0.39
TPM1-205ENST00000357980 Q6ZQT7 251 aa12.65□□□□□ -0.39
TPM1-205ENST00000357980 C11orf21Q9P2W6 132 aa12.65□□□□□ -0.39
TPM1-205ENST00000357980 TMEM189A5PLL7 270 aa12.64□□□□□ -0.39
TPM1-205ENST00000357980 H3BMM0 161 aa12.64□□□□□ -0.39
TPM1-205ENST00000357980 GPX1P07203 203 aa12.64□□□□□ -0.39
TPM1-205ENST00000357980 RPS10P46783 165 aaKnown RBP12.64□□□□□ -0.39
TPM1-205ENST00000357980 FOXA3P55318 350 aaPredicted RBP12.64□□□□□ -0.39
TPM1-205ENST00000357980 ACTL10Q5JWF8 245 aa12.64□□□□□ -0.39
TPM1-205ENST00000357980 SRD5A3Q9H8P0 318 aa12.64□□□□□ -0.39
TPM1-205ENST00000357980 STAB1Q9NY15 2570 aa12.63□□□□□ -0.39
TPM1-205ENST00000357980 J3KRW8 73 aa12.63□□□□□ -0.39
TPM1-205ENST00000357980 BEAN1Q3B7T3 259 aa12.63□□□□□ -0.39
TPM1-205ENST00000357980 Q6AWC8 147 aa12.63□□□□□ -0.39
TPM1-205ENST00000357980 IGKV3-20P01619 116 aa12.62□□□□□ -0.39
TPM1-205ENST00000357980 INSL3P51460 131 aa12.62□□□□□ -0.39
TPM1-205ENST00000357980 TMSB15BA0A087X1C1 80 aa12.62□□□□□ -0.39
TPM1-205ENST00000357980 IGKV3D-20A0A0C4DH25 116 aa12.62□□□□□ -0.39
TPM1-205ENST00000357980 ORM1P02763 201 aa12.62□□□□□ -0.39
TPM1-205ENST00000357980 FRMD6-AS1P0C7T7 363 aa12.62□□□□□ -0.39
TPM1-205ENST00000357980 RNASE4P34096 147 aaKnown RBP12.62□□□□□ -0.39
TPM1-205ENST00000357980 LEPP41159 167 aa12.62□□□□□ -0.39
TPM1-205ENST00000357980 FAM110AQ9BQ89 295 aa12.62□□□□□ -0.39
TPM1-205ENST00000357980 TRRAPQ9Y4A5 3859 aa12.62□□□□□ -0.39
TPM1-205ENST00000357980 TRAV21A0A0B4J279 112 aa12.61□□□□□ -0.39
TPM1-205ENST00000357980 XKRY2A2RUG3 117 aa12.61□□□□□ -0.39
TPM1-205ENST00000357980 OR11H12B2RN74 326 aa12.61□□□□□ -0.39
TPM1-205ENST00000357980 SPINK4O60575 86 aa12.61□□□□□ -0.39
TPM1-205ENST00000357980 RPS20P60866 119 aaKnown RBP12.61□□□□□ -0.39
TPM1-205ENST00000357980 C9orf66Q5T8R8 295 aa12.61□□□□□ -0.39
TPM1-205ENST00000357980 RBMY1BA6NDE4 496 aaKnown RBP12.6□□□□□ -0.39
TPM1-205ENST00000357980 RBMY1EA6NEQ0 496 aaKnown RBP12.6□□□□□ -0.39
TPM1-205ENST00000357980 RBMY1DP0C7P1 496 aaKnown RBP12.6□□□□□ -0.39
TPM1-205ENST00000357980 C3orf56Q8N813 242 aa12.6□□□□□ -0.39
TPM1-205ENST00000357980 WFDC9Q8NEX5 89 aa12.6□□□□□ -0.39
TPM1-205ENST00000357980 TMEM158Q8WZ71 300 aa12.6□□□□□ -0.39
TPM1-205ENST00000357980 M0R2Z0 102 aa12.6□□□□□ -0.39
TPM1-205ENST00000357980 PHOX2AO14813 284 aa12.6□□□□□ -0.39
TPM1-205ENST00000357980 TSPOP30536 169 aa12.6□□□□□ -0.39
TPM1-205ENST00000357980 CDKN1BP46527 198 aa12.6□□□□□ -0.39
TPM1-205ENST00000357980 SPINK13Q1W4C9 94 aa12.6□□□□□ -0.39
TPM1-205ENST00000357980 MRPL54Q6P161 138 aaKnown RBP12.6□□□□□ -0.39
TPM1-205ENST00000357980 PGLYRP4Q96LB8 373 aa12.6□□□□□ -0.39
TPM1-205ENST00000357980 CLUHP3Q96NS8 147 aa12.6□□□□□ -0.39
TPM1-205ENST00000357980 C19orf73Q9NVV2 129 aa12.6□□□□□ -0.39
TPM1-205ENST00000357980 NOTCH3Q9UM47 2321 aa12.59□□□□□ -0.39
TPM1-205ENST00000357980 TRGC2P03986 189 aa12.59□□□□□ -0.39
TPM1-205ENST00000357980 CD7P09564 240 aa12.59□□□□□ -0.39
TPM1-205ENST00000357980 CMC4P56277 68 aaPredicted RBP12.59□□□□□ -0.39
TPM1-205ENST00000357980 GFI1BQ5VTD9 330 aa12.59□□□□□ -0.39
TPM1-205ENST00000357980 SHISA2Q6UWI4 295 aa12.59□□□□□ -0.39
TPM1-205ENST00000357980 ATP5L2Q7Z4Y8 100 aa12.59□□□□□ -0.39
TPM1-205ENST00000357980 COL6A5A8TX70 2615 aa12.59□□□□□ -0.39
TPM1-205ENST00000357980 A0A1B0GXF2 115 aa12.58□□□□□ -0.4
TPM1-205ENST00000357980 C7orf71A4D174 169 aa12.58□□□□□ -0.4
TPM1-205ENST00000357980 IGLC6P0CF74 106 aa12.58□□□□□ -0.4
TPM1-205ENST00000357980 C12orf54Q6X4T0 127 aa12.58□□□□□ -0.4
TPM1-205ENST00000357980 C1orf196B1AJZ1 125 aa12.58□□□□□ -0.4
TPM1-205ENST00000357980 ZNF324O75467 553 aaPredicted RBP12.58□□□□□ -0.4
TPM1-205ENST00000357980 CTRLP40313 264 aa12.58□□□□□ -0.4
TPM1-205ENST00000357980 RASL11AQ6T310 242 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms