RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 IGKV1D-8A0A087WSZ0 117 aa13.89□□□□□ -0.19
COL27A1-201ENST00000356083 NDUFB1O75438 58 aa13.89□□□□□ -0.19
COL27A1-201ENST00000356083 CRYBA4P53673 196 aa13.89□□□□□ -0.19
COL27A1-201ENST00000356083 PLXNA2O75051 1894 aa13.89□□□□□ -0.19
COL27A1-201ENST00000356083 IGHV1-24A0A0C4DH33 117 aa13.88□□□□□ -0.19
COL27A1-201ENST00000356083 GAFA1Q96PS6 74 aa13.88□□□□□ -0.19
COL27A1-201ENST00000356083 IGHV1-69DA0A0B4J2H0 117 aa13.88□□□□□ -0.19
COL27A1-201ENST00000356083 H0Y9J4 135 aa13.88□□□□□ -0.19
COL27A1-201ENST00000356083 IGHV1-69P01742 117 aa13.88□□□□□ -0.19
COL27A1-201ENST00000356083 NOTCH4Q99466 2003 aa13.88□□□□□ -0.19
COL27A1-201ENST00000356083 BDP1A6H8Y1 2624 aa13.88□□□□□ -0.19
COL27A1-201ENST00000356083 IGHV1OR15-1A0A075B7D0 117 aa13.88□□□□□ -0.19
COL27A1-201ENST00000356083 COL5A3P25940 1745 aaPredicted RBP13.88□□□□□ -0.19
COL27A1-201ENST00000356083 HIVEP2P31629 2446 aa13.88□□□□□ -0.19
COL27A1-201ENST00000356083 IGLL5B9A064 214 aa13.88□□□□□ -0.19
COL27A1-201ENST00000356083 IGFBP3P17936 291 aaPredicted RBP13.88□□□□□ -0.19
COL27A1-201ENST00000356083 GATA3P23771 443 aa13.88□□□□□ -0.19
COL27A1-201ENST00000356083 C8orf86Q6ZUL3 223 aa13.88□□□□□ -0.19
COL27A1-201ENST00000356083 TRAV13-2A0A0B4J235 113 aa13.87□□□□□ -0.19
COL27A1-201ENST00000356083 A8MWP6 167 aa13.87□□□□□ -0.19
COL27A1-201ENST00000356083 FUSP35637 526 aaKnown RBP eCLIP13.87□□□□□ -0.191e-8■■■■■ 29.3
COL27A1-201ENST00000356083 TSSC4Q9Y5U2 329 aaPredicted RBP13.87□□□□□ -0.19
COL27A1-201ENST00000356083 ASPHD1Q5U4P2 390 aa13.87□□□□□ -0.19
COL27A1-201ENST00000356083 KIAA1671Q9BY89 1806 aa13.87□□□□□ -0.19
COL27A1-201ENST00000356083 IGHG2P01859 326 aa13.87□□□□□ -0.19
COL27A1-201ENST00000356083 ANKRD39Q53RE8 183 aa13.87□□□□□ -0.19
COL27A1-201ENST00000356083 OOSP1A8MZH6 123 aa13.87□□□□□ -0.19
COL27A1-201ENST00000356083 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.86□□□□□ -0.19
COL27A1-201ENST00000356083 IGKV2-29A2NJV5 120 aaPredicted RBP13.86□□□□□ -0.19
COL27A1-201ENST00000356083 RNF222A6NCQ9 220 aa13.86□□□□□ -0.19
COL27A1-201ENST00000356083 LINC00473A8K010 186 aa13.86□□□□□ -0.19
COL27A1-201ENST00000356083 IGKV4-1P06312 121 aa13.86□□□□□ -0.19
COL27A1-201ENST00000356083 IFITM1P13164 125 aa13.86□□□□□ -0.19
COL27A1-201ENST00000356083 APRG1Q8IVJ8 170 aa13.86□□□□□ -0.19
COL27A1-201ENST00000356083 CARHSP1Q9Y2V2 147 aaKnown RBP13.86□□□□□ -0.19
COL27A1-201ENST00000356083 SDHAF1A6NFY7 115 aa13.85□□□□□ -0.19
COL27A1-201ENST00000356083 GGNQ86UU5 652 aa13.85□□□□□ -0.19
COL27A1-201ENST00000356083 PIFOQ8TCI5 191 aa13.85□□□□□ -0.19
COL27A1-201ENST00000356083 GTSF1Q8WW33 167 aa13.85□□□□□ -0.19
COL27A1-201ENST00000356083 IGFBPL1Q8WX77 278 aa13.85□□□□□ -0.19
COL27A1-201ENST00000356083 PLXNA4Q9HCM2 1894 aa13.85□□□□□ -0.19
COL27A1-201ENST00000356083 CAMK2N2Q96S95 79 aa13.85□□□□□ -0.19
COL27A1-201ENST00000356083 SRCAPQ6ZRS2 3230 aa13.85□□□□□ -0.19
COL27A1-201ENST00000356083 IGLV3-21P80748 117 aaPredicted RBP13.85□□□□□ -0.19
COL27A1-201ENST00000356083 HS3ST6Q96QI5 342 aa13.85□□□□□ -0.19
COL27A1-201ENST00000356083 NDUFA12Q9UI09 145 aa13.85□□□□□ -0.19
COL27A1-201ENST00000356083 U3KQE9 123 aa13.85□□□□□ -0.19
COL27A1-201ENST00000356083 SHISA3A0PJX4 238 aa13.85□□□□□ -0.19
COL27A1-201ENST00000356083 KLK5Q9Y337 293 aaPredicted RBP13.85□□□□□ -0.19
COL27A1-201ENST00000356083 UBE2CO00762 179 aa13.84□□□□□ -0.19
COL27A1-201ENST00000356083 SRSF8Q9BRL6 282 aaKnown RBP13.84□□□□□ -0.19
COL27A1-201ENST00000356083 C15orf53Q8NAA6 179 aa13.84□□□□□ -0.19
COL27A1-201ENST00000356083 COX7B2Q8TF08 81 aa13.84□□□□□ -0.19
COL27A1-201ENST00000356083 TEX22C9J3V5 150 aa13.84□□□□□ -0.19
COL27A1-201ENST00000356083 ZFP36L1Q07352 338 aaKnown RBP13.84□□□□□ -0.19
COL27A1-201ENST00000356083 WDR83OSQ9Y284 106 aa13.84□□□□□ -0.19
COL27A1-201ENST00000356083 DEFB4AO15263 64 aa13.83□□□□□ -0.19
COL27A1-201ENST00000356083 CASC2Q6XLA1 102 aa13.83□□□□□ -0.2
COL27A1-201ENST00000356083 REG4Q9BYZ8 158 aa13.83□□□□□ -0.2
COL27A1-201ENST00000356083 GYPEP15421 78 aa13.83□□□□□ -0.2
COL27A1-201ENST00000356083 EIF4EBP2Q13542 120 aaPredicted RBP13.83□□□□□ -0.2
COL27A1-201ENST00000356083 C2orf66Q6UXQ4 117 aa13.83□□□□□ -0.2
COL27A1-201ENST00000356083 IGKV1-12A0A0C4DH73 117 aa13.82□□□□□ -0.2
COL27A1-201ENST00000356083 NDUFB8O95169 186 aa13.82□□□□□ -0.2
COL27A1-201ENST00000356083 WISP3O95389 354 aaPredicted RBP13.82□□□□□ -0.2
COL27A1-201ENST00000356083 C3orf79P0CE67 100 aa13.82□□□□□ -0.2
COL27A1-201ENST00000356083 IGKV1-27A0A075B6S5 117 aa13.82□□□□□ -0.2
COL27A1-201ENST00000356083 ZSWIM8A7E2V4 1837 aa13.82□□□□□ -0.2
COL27A1-201ENST00000356083 ANKRD29Q8N6D5 301 aa13.82□□□□□ -0.2
COL27A1-201ENST00000356083 LINC01551Q86U37 167 aa13.82□□□□□ -0.2
COL27A1-201ENST00000356083 TMEM141Q96I45 108 aa13.82□□□□□ -0.2
COL27A1-201ENST00000356083 NPBQ8NG41 125 aa13.81□□□□□ -0.2
COL27A1-201ENST00000356083 CARD19Q96LW7 228 aa13.81□□□□□ -0.2
COL27A1-201ENST00000356083 ARTNQ5T4W7 220 aa13.81□□□□□ -0.2
COL27A1-201ENST00000356083 IGKV1D-17A0A075B6S4 117 aa13.81□□□□□ -0.2
COL27A1-201ENST00000356083 LYPD1Q8N2G4 141 aa13.81□□□□□ -0.2
COL27A1-201ENST00000356083 WFDC11Q8NEX6 87 aa13.81□□□□□ -0.2
COL27A1-201ENST00000356083 CT83Q5H943 113 aa13.81□□□□□ -0.2
COL27A1-201ENST00000356083 COL4A6Q14031 1691 aa13.81□□□□□ -0.2
COL27A1-201ENST00000356083 SLAQ13239 276 aa13.8□□□□□ -0.2
COL27A1-201ENST00000356083 PLXNA3P51805 1871 aa13.8□□□□□ -0.2
COL27A1-201ENST00000356083 GAGE12HA6NDE8 117 aa13.8□□□□□ -0.2
COL27A1-201ENST00000356083 GPHB5Q86YW7 130 aa13.8□□□□□ -0.2
COL27A1-201ENST00000356083 RNF138Q8WVD3 245 aa13.8□□□□□ -0.2
COL27A1-201ENST00000356083 ACYP1P07311 99 aa13.8□□□□□ -0.2
COL27A1-201ENST00000356083 PROP1O75360 226 aa13.8□□□□□ -0.2
COL27A1-201ENST00000356083 SIPA1L1O43166 1804 aa13.8□□□□□ -0.2
COL27A1-201ENST00000356083 TRAV4A0A0B4J268 109 aa13.8□□□□□ -0.2
COL27A1-201ENST00000356083 MST1P26927 711 aa13.8□□□□□ -0.2
COL27A1-201ENST00000356083 WIPF2Q8TF74 440 aaPredicted RBP13.79□□□□□ -0.2
COL27A1-201ENST00000356083 ORMDL1Q9P0S3 153 aa13.79□□□□□ -0.2
COL27A1-201ENST00000356083 HERVK_113P63121 156 aa13.79□□□□□ -0.2
COL27A1-201ENST00000356083 HIVEP3Q5T1R4 2406 aa13.79□□□□□ -0.2
COL27A1-201ENST00000356083 SPRY2O43597 315 aa13.79□□□□□ -0.2
COL27A1-201ENST00000356083 OR11H6Q8NGC7 330 aa13.79□□□□□ -0.2
COL27A1-201ENST00000356083 FOXE3Q13461 319 aa13.79□□□□□ -0.2
COL27A1-201ENST00000356083 C9orf66Q5T8R8 295 aa13.79□□□□□ -0.2
COL27A1-201ENST00000356083 FBLN5Q9UBX5 448 aa13.78□□□□□ -0.2
COL27A1-201ENST00000356083 RNF5Q99942 180 aa13.78□□□□□ -0.2
COL27A1-201ENST00000356083 F6UB75 175 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms