RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 C8orf49Q96NF6 230 aa11.22□□□□□ -0.61
SREBF1-202ENST00000355815 MRPL35Q9NZE8 188 aaKnown RBP11.22□□□□□ -0.61
SREBF1-202ENST00000355815 EFNA4P52798 201 aa11.22□□□□□ -0.61
SREBF1-202ENST00000355815 SIGLEC9Q9Y336 463 aa11.22□□□□□ -0.61
SREBF1-202ENST00000355815 TRAV8-3A0A0A6YYJ7 113 aa11.21□□□□□ -0.61
SREBF1-202ENST00000355815 TNFRSF6BO95407 300 aa11.21□□□□□ -0.61
SREBF1-202ENST00000355815 CD7P09564 240 aa11.21□□□□□ -0.61
SREBF1-202ENST00000355815 CENPEQ02224 2701 aa11.21□□□□□ -0.61
SREBF1-202ENST00000355815 TRAV26-2A0A0B4J265 109 aa11.21□□□□□ -0.61
SREBF1-202ENST00000355815 LRRK2Q5S007 2527 aa11.21□□□□□ -0.62
SREBF1-202ENST00000355815 ERCC8Q13216 396 aa11.21□□□□□ -0.62
SREBF1-202ENST00000355815 DSCAMO60469 2012 aa11.21□□□□□ -0.62
SREBF1-202ENST00000355815 RS1O15537 224 aa11.21□□□□□ -0.62
SREBF1-202ENST00000355815 NPYP01303 97 aa11.21□□□□□ -0.62
SREBF1-202ENST00000355815 SLC25A16P16260 332 aa11.21□□□□□ -0.62
SREBF1-202ENST00000355815 ID1P41134 155 aa11.21□□□□□ -0.62
SREBF1-202ENST00000355815 EDA2RQ9HAV5 297 aa11.21□□□□□ -0.62
SREBF1-202ENST00000355815 TMEM219Q86XT9 240 aa11.2□□□□□ -0.62
SREBF1-202ENST00000355815 ZNF625Q96I27 306 aaPredicted RBP11.2□□□□□ -0.62
SREBF1-202ENST00000355815 NDUFA4L2Q9NRX3 87 aa11.2□□□□□ -0.62
SREBF1-202ENST00000355815 EXPH5Q8NEV8 1989 aa11.2□□□□□ -0.62
SREBF1-202ENST00000355815 NDUFB8O95169 186 aa11.2□□□□□ -0.62
SREBF1-202ENST00000355815 NDPQ00604 133 aa11.2□□□□□ -0.62
SREBF1-202ENST00000355815 ZNF747Q9BV97 191 aa11.2□□□□□ -0.62
SREBF1-202ENST00000355815 MUC3AQ02505 3323 aa11.2□□□□□ -0.62
SREBF1-202ENST00000355815 TRGV3P03979 118 aa11.2□□□□□ -0.62
SREBF1-202ENST00000355815 ORMDL2Q53FV1 153 aa11.2□□□□□ -0.62
SREBF1-202ENST00000355815 TRBV7-9A0A0J9YWB2 115 aa11.19□□□□□ -0.62
SREBF1-202ENST00000355815 NBR2O15453 112 aa11.19□□□□□ -0.62
SREBF1-202ENST00000355815 SPRY2O43597 315 aa11.19□□□□□ -0.62
SREBF1-202ENST00000355815 GATA4P43694 442 aa11.19□□□□□ -0.62
SREBF1-202ENST00000355815 MRPL51Q4U2R6 128 aaKnown RBP11.19□□□□□ -0.62
SREBF1-202ENST00000355815 IGFL2Q6UWQ7 119 aa11.19□□□□□ -0.62
SREBF1-202ENST00000355815 C11orf52Q96A22 123 aa11.19□□□□□ -0.62
SREBF1-202ENST00000355815 MRPL36Q9P0J6 103 aaKnown RBP11.19□□□□□ -0.62
SREBF1-202ENST00000355815 KLF12Q9Y4X4 402 aa11.19□□□□□ -0.62
SREBF1-202ENST00000355815 LHBP01229 141 aa11.19□□□□□ -0.62
SREBF1-202ENST00000355815 IGLC1P0CG04 106 aa11.19□□□□□ -0.62
SREBF1-202ENST00000355815 TCF15Q12870 199 aa11.19□□□□□ -0.62
SREBF1-202ENST00000355815 SLC25A2Q9BXI2 301 aa11.19□□□□□ -0.62
SREBF1-202ENST00000355815 SMPXQ9UHP9 88 aa11.19□□□□□ -0.62
SREBF1-202ENST00000355815 LOC400499M0QZD8 3231 aa11.19□□□□□ -0.62
SREBF1-202ENST00000355815 BUB1B-PAK6H3BSN5 160 aa11.18□□□□□ -0.62
SREBF1-202ENST00000355815 THBDP07204 575 aa11.18□□□□□ -0.62
SREBF1-202ENST00000355815 TMEM30BQ3MIR4 351 aa11.18□□□□□ -0.62
SREBF1-202ENST00000355815 FAM104BQ5XKR9 115 aa11.18□□□□□ -0.62
SREBF1-202ENST00000355815 IGFL3Q6UXB1 125 aa11.18□□□□□ -0.62
SREBF1-202ENST00000355815 NEGR1Q7Z3B1 354 aa11.18□□□□□ -0.62
SREBF1-202ENST00000355815 DDB2Q92466 427 aa11.18□□□□□ -0.62
SREBF1-202ENST00000355815 NPFFR1Q9GZQ6 430 aa11.18□□□□□ -0.62
SREBF1-202ENST00000355815 FAM120AOSQ5T036 256 aa11.18□□□□□ -0.62
SREBF1-202ENST00000355815 KMT2EQ8IZD2 1858 aa11.18□□□□□ -0.62
SREBF1-202ENST00000355815 IGHV3-73A0A0B4J1V6 119 aa11.18□□□□□ -0.62
SREBF1-202ENST00000355815 PLNP26678 52 aa11.18□□□□□ -0.62
SREBF1-202ENST00000355815 PRSS33Q8NF86 280 aa11.18□□□□□ -0.62
SREBF1-202ENST00000355815 TNFRSF18Q9Y5U5 241 aa11.18□□□□□ -0.62
SREBF1-202ENST00000355815 H7C1H1 209 aa11.18□□□□□ -0.62
SREBF1-202ENST00000355815 HLA-DRB4P13762 266 aa11.18□□□□□ -0.62
SREBF1-202ENST00000355815 FXYD2P54710 66 aa11.18□□□□□ -0.62
SREBF1-202ENST00000355815 HLA-DRB4X5D2U9 266 aa11.18□□□□□ -0.62
SREBF1-202ENST00000355815 CFAP47Q6ZTR5 3102 aa11.17□□□□□ -0.62
SREBF1-202ENST00000355815 F8W1H4 67 aa11.17□□□□□ -0.62
SREBF1-202ENST00000355815 PRR20EP86478 221 aa11.17□□□□□ -0.62
SREBF1-202ENST00000355815 PRR20CP86479 221 aa11.17□□□□□ -0.62
SREBF1-202ENST00000355815 PRR20DP86480 221 aa11.17□□□□□ -0.62
SREBF1-202ENST00000355815 PRR20BP86481 221 aa11.17□□□□□ -0.62
SREBF1-202ENST00000355815 PRR20AP86496 221 aa11.17□□□□□ -0.62
SREBF1-202ENST00000355815 PAPPA-AS1Q5QFB9 102 aa11.17□□□□□ -0.62
SREBF1-202ENST00000355815 CENPVQ7Z7K6 275 aaPredicted RBP11.17□□□□□ -0.62
SREBF1-202ENST00000355815 GATA1P15976 413 aaPredicted RBP11.17□□□□□ -0.62
SREBF1-202ENST00000355815 PVRIGQ6DKI7 326 aa11.17□□□□□ -0.62
SREBF1-202ENST00000355815 M0R2P5 195 aa11.16□□□□□ -0.62
SREBF1-202ENST00000355815 ZNF562Q6V9R5 426 aa11.16□□□□□ -0.62
SREBF1-202ENST00000355815 RNF182Q8N6D2 247 aa11.16□□□□□ -0.62
SREBF1-202ENST00000355815 C17orf77Q96MU5 243 aa11.16□□□□□ -0.62
SREBF1-202ENST00000355815 A0A087WWL8 130 aa11.16□□□□□ -0.62
SREBF1-202ENST00000355815 BRD3OSQ6XYD6 125 aa11.16□□□□□ -0.62
SREBF1-202ENST00000355815 HIST1H4AP62805 103 aaKnown RBP11.15□□□□□ -0.62
SREBF1-202ENST00000355815 HERV-K104P63124 156 aa11.15□□□□□ -0.62
SREBF1-202ENST00000355815 C12orf74Q32Q52 190 aa11.15□□□□□ -0.62
SREBF1-202ENST00000355815 TRGV9Q99603 122 aa11.15□□□□□ -0.62
SREBF1-202ENST00000355815 PPDPFLQ8WWR9 84 aa11.15□□□□□ -0.62
SREBF1-202ENST00000355815 EEF1AKMT3Q96AZ1 226 aa11.15□□□□□ -0.62
SREBF1-202ENST00000355815 SPXQ9BT56 116 aa11.15□□□□□ -0.62
SREBF1-202ENST00000355815 ZNF833PQ6ZTB9 187 aa11.15□□□□□ -0.62
SREBF1-202ENST00000355815 RNF114Q9Y508 228 aa11.15□□□□□ -0.62
SREBF1-202ENST00000355815 P0C879 139 aa11.15□□□□□ -0.63
SREBF1-202ENST00000355815 CD28P10747 220 aa11.15□□□□□ -0.63
SREBF1-202ENST00000355815 C9orf153Q5TBE3 101 aa11.15□□□□□ -0.63
SREBF1-202ENST00000355815 LGALS9BQ3B8N2 356 aa11.14□□□□□ -0.63
SREBF1-202ENST00000355815 LGALS9CQ6DKI2 356 aa11.14□□□□□ -0.63
SREBF1-202ENST00000355815 DYNLRB2Q8TF09 96 aa11.14□□□□□ -0.63
SREBF1-202ENST00000355815 PRADC1Q9BSG0 188 aa11.14□□□□□ -0.63
SREBF1-202ENST00000355815 FAM231DQ6ZW35 169 aa11.14□□□□□ -0.63
SREBF1-202ENST00000355815 NEU4Q8WWR8 484 aaPredicted RBP11.14□□□□□ -0.63
SREBF1-202ENST00000355815 YPEL4Q96NS1 127 aa11.14□□□□□ -0.63
SREBF1-202ENST00000355815 TRBV25-1A0A075B6N4 114 aa11.13□□□□□ -0.63
SREBF1-202ENST00000355815 UBE2L6O14933 153 aa11.13□□□□□ -0.63
SREBF1-202ENST00000355815 ATP5J2P56134 94 aa11.13□□□□□ -0.63
SREBF1-202ENST00000355815 PTH2Q96A98 100 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms