RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 RRN3P1Q2M238 152 aa8.54□□□□□ -1.04
SND1-201ENST00000354725 VKORC1L1Q8N0U8 176 aa8.54□□□□□ -1.04
SND1-201ENST00000354725 NPIPB6E9PJ23 425 aa8.53□□□□□ -1.04
SND1-201ENST00000354725 FSTL3O95633 263 aa8.53□□□□□ -1.04
SND1-201ENST00000354725 ELANEP08246 267 aa8.53□□□□□ -1.04
SND1-201ENST00000354725 FOXA3P55318 350 aaPredicted RBP8.53□□□□□ -1.04
SND1-201ENST00000354725 HSPE1P61604 102 aaKnown RBP8.53□□□□□ -1.04
SND1-201ENST00000354725 RFESDQ8TAC1 157 aa8.53□□□□□ -1.04
SND1-201ENST00000354725 ZNF747Q9BV97 191 aa8.53□□□□□ -1.04
SND1-201ENST00000354725 JPT2Q9H910 190 aa8.53□□□□□ -1.04
SND1-201ENST00000354725 TIMM8BQ9Y5J9 83 aaPredicted RBP8.53□□□□□ -1.04
SND1-201ENST00000354725 NMUP48645 174 aa8.53□□□□□ -1.04
SND1-201ENST00000354725 Q6ZQT7 251 aa8.53□□□□□ -1.04
SND1-201ENST00000354725 KLF12Q9Y4X4 402 aa8.53□□□□□ -1.04
SND1-201ENST00000354725 J3QKU1 62 aa8.53□□□□□ -1.04
SND1-201ENST00000354725 SAA2P0DJI9 122 aaPredicted RBP8.53□□□□□ -1.04
SND1-201ENST00000354725 FBXL19-AS1Q494R0 122 aa8.53□□□□□ -1.04
SND1-201ENST00000354725 SPRNQ5BIV9 151 aa8.53□□□□□ -1.04
SND1-201ENST00000354725 PIP4P2Q8N4L2 257 aa8.53□□□□□ -1.04
SND1-201ENST00000354725 NUP35Q8NFH5 326 aa8.53□□□□□ -1.04
SND1-201ENST00000354725 BRK1Q8WUW1 75 aa8.53□□□□□ -1.04
SND1-201ENST00000354725 SLC25A15Q9Y619 301 aa8.53□□□□□ -1.04
SND1-201ENST00000354725 TACC2O95359 2948 aa8.53□□□□□ -1.04
SND1-201ENST00000354725 K7EMI3 77 aa8.52□□□□□ -1.05
SND1-201ENST00000354725 IGHV3-13P01766 116 aa8.52□□□□□ -1.05
SND1-201ENST00000354725 RPS28P62857 69 aaKnown RBP8.52□□□□□ -1.05
SND1-201ENST00000354725 PRCDQ00LT1 54 aa8.52□□□□□ -1.05
SND1-201ENST00000354725 C12orf74Q32Q52 190 aa8.52□□□□□ -1.05
SND1-201ENST00000354725 C9orf153Q5TBE3 101 aa8.52□□□□□ -1.05
SND1-201ENST00000354725 CEND1Q8N111 149 aa8.52□□□□□ -1.05
SND1-201ENST00000354725 CALYQ9NYX4 217 aa8.52□□□□□ -1.05
SND1-201ENST00000354725 ZNF469Q96JG9 3925 aaPredicted RBP8.52□□□□□ -1.05
SND1-201ENST00000354725 IGLV3-9A0A075B6K5 115 aa8.52□□□□□ -1.05
SND1-201ENST00000354725 GGTLC3B5MD39 225 aa8.52□□□□□ -1.05
SND1-201ENST00000354725 C2orf83Q53S99 150 aa8.52□□□□□ -1.05
SND1-201ENST00000354725 FAM168AQ92567 244 aa8.52□□□□□ -1.05
SND1-201ENST00000354725 S1PR3Q99500 378 aa8.52□□□□□ -1.05
SND1-201ENST00000354725 CHAC1Q9BUX1 264 aa8.52□□□□□ -1.05
SND1-201ENST00000354725 ASH1LQ9NR48 2969 aaKnown RBP8.52□□□□□ -1.05
SND1-201ENST00000354725 ASIPP42127 132 aa8.52□□□□□ -1.05
SND1-201ENST00000354725 FAM167A-AS1Q96KT0 104 aa8.52□□□□□ -1.05
SND1-201ENST00000354725 PDZD2O15018 2839 aa8.51□□□□□ -1.05
SND1-201ENST00000354725 HEATR1Q9H583 2144 aaKnown RBP8.51□□□□□ -1.05
SND1-201ENST00000354725 APOHP02749 345 aaPredicted RBP8.51□□□□□ -1.05
SND1-201ENST00000354725 TMEM30BQ3MIR4 351 aa8.51□□□□□ -1.05
SND1-201ENST00000354725 MIR17HGQ75NE6 70 aa8.51□□□□□ -1.05
SND1-201ENST00000354725 C7orf69Q9H7B7 122 aa8.51□□□□□ -1.05
SND1-201ENST00000354725 DOPEY1Q5JWR5 2465 aa8.51□□□□□ -1.05
SND1-201ENST00000354725 CACNA1DQ01668 2161 aa8.51□□□□□ -1.05
SND1-201ENST00000354725 LINC01548A6NM66 108 aa8.51□□□□□ -1.05
SND1-201ENST00000354725 ERVK-16P61578 105 aa8.51□□□□□ -1.05
SND1-201ENST00000354725 HERVK_113P63121 156 aa8.51□□□□□ -1.05
SND1-201ENST00000354725 PVRIGQ6DKI7 326 aa8.51□□□□□ -1.05
SND1-201ENST00000354725 SSMEM1Q8WWF3 244 aa8.51□□□□□ -1.05
SND1-201ENST00000354725 TMEM167BQ9NRX6 74 aa8.51□□□□□ -1.05
SND1-201ENST00000354725 ZNRF2Q8NHG8 242 aa8.5□□□□□ -1.05
SND1-201ENST00000354725 NDUFA7O95182 113 aa8.5□□□□□ -1.05
SND1-201ENST00000354725 ZNF138P52744 262 aa8.5□□□□□ -1.05
SND1-201ENST00000354725 PSMG3-AS1Q96PY0 264 aa8.5□□□□□ -1.05
SND1-201ENST00000354725 CCL21O00585 134 aa8.5□□□□□ -1.05
SND1-201ENST00000354725 CD40P25942 277 aa8.5□□□□□ -1.05
SND1-201ENST00000354725 MYCNOSP40205 109 aa8.5□□□□□ -1.05
SND1-201ENST00000354725 TNFAIP6P98066 277 aaPredicted RBP8.5□□□□□ -1.05
SND1-201ENST00000354725 SLC25A48Q6ZT89 311 aaKnown RBP8.5□□□□□ -1.05
SND1-201ENST00000354725 DLX4Q92988 240 aaPredicted RBP8.5□□□□□ -1.05
SND1-201ENST00000354725 UPK2O00526 184 aa8.49□□□□□ -1.05
SND1-201ENST00000354725 FAM19A1Q7Z5A9 133 aa8.49□□□□□ -1.05
SND1-201ENST00000354725 ZNF714Q96N38 554 aa8.49□□□□□ -1.05
SND1-201ENST00000354725 PRSS22Q9GZN4 317 aa8.49□□□□□ -1.05
SND1-201ENST00000354725 AP5S1Q9NUS5 200 aa8.49□□□□□ -1.05
SND1-201ENST00000354725 CD24P25063 80 aa8.49□□□□□ -1.05
SND1-201ENST00000354725 LGALS9BQ3B8N2 356 aa8.49□□□□□ -1.05
SND1-201ENST00000354725 LGALS9CQ6DKI2 356 aa8.49□□□□□ -1.05
SND1-201ENST00000354725 ZNF833PQ6ZTB9 187 aa8.49□□□□□ -1.05
SND1-201ENST00000354725 ZNRF1Q8ND25 227 aa8.49□□□□□ -1.05
SND1-201ENST00000354725 OR9G1Q8NH87 305 aa8.49□□□□□ -1.05
SND1-201ENST00000354725 NABP2Q9BQ15 211 aa8.49□□□□□ -1.05
SND1-201ENST00000354725 CHCHD5Q9BSY4 110 aa8.49□□□□□ -1.05
SND1-201ENST00000354725 SLC25A2Q9BXI2 301 aa8.49□□□□□ -1.05
SND1-201ENST00000354725 PROCRQ9UNN8 238 aa8.49□□□□□ -1.05
SND1-201ENST00000354725 INTS1Q8N201 2190 aaKnown RBP8.49□□□□□ -1.05
SND1-201ENST00000354725 SRRM4A7MD48 611 aaKnown RBP8.49□□□□□ -1.05
SND1-201ENST00000354725 LTAP01374 205 aa8.49□□□□□ -1.05
SND1-201ENST00000354725 C8orf88P0DMB2 117 aa8.49□□□□□ -1.05
SND1-201ENST00000354725 RNASE2P10153 161 aaKnown RBP8.49□□□□□ -1.05
SND1-201ENST00000354725 TMEM219Q86XT9 240 aa8.49□□□□□ -1.05
SND1-201ENST00000354725 A0A1B0GXF2 115 aa8.48□□□□□ -1.05
SND1-201ENST00000354725 GAFA1Q96PS6 74 aa8.48□□□□□ -1.05
SND1-201ENST00000354725 DUSP14O95147 198 aaKnown RBP8.48□□□□□ -1.05
SND1-201ENST00000354725 TEX36Q5VZQ5 186 aa8.48□□□□□ -1.05
SND1-201ENST00000354725 TRPT1Q86TN4 253 aaKnown RBP8.48□□□□□ -1.05
SND1-201ENST00000354725 EEF1AKMT3Q96AZ1 226 aa8.48□□□□□ -1.05
SND1-201ENST00000354725 H3BTX0 84 aa8.48□□□□□ -1.05
SND1-201ENST00000354725 VPREB1P12018 145 aa8.48□□□□□ -1.05
SND1-201ENST00000354725 GOLT1AQ6ZVE7 132 aa8.48□□□□□ -1.05
SND1-201ENST00000354725 ATP5L2Q7Z4Y8 100 aa8.48□□□□□ -1.05
SND1-201ENST00000354725 CIARTQ8N365 385 aaPredicted RBP8.48□□□□□ -1.05
SND1-201ENST00000354725 NPIPB3Q92617 1050 aa8.48□□□□□ -1.05
SND1-201ENST00000354725 NDUFA4L2Q9NRX3 87 aa8.48□□□□□ -1.05
SND1-201ENST00000354725 APCP25054 2843 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms