RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 LY6G6DO95868 133 aa8.48□□□□□ -1.05
SVIP-201ENST00000354193 ELANEP08246 267 aa8.48□□□□□ -1.05
SVIP-201ENST00000354193 CDX1P47902 265 aaPredicted RBP8.48□□□□□ -1.05
SVIP-201ENST00000354193 SLAQ13239 276 aa8.48□□□□□ -1.05
SVIP-201ENST00000354193 C9orf139Q6ZV77 190 aa8.48□□□□□ -1.05
SVIP-201ENST00000354193 TCEAL7Q9BRU2 100 aa8.48□□□□□ -1.05
SVIP-201ENST00000354193 ZNF702PQ9H963 129 aa8.48□□□□□ -1.05
SVIP-201ENST00000354193 C5orf52A6NGY3 159 aa8.48□□□□□ -1.05
SVIP-201ENST00000354193 KNCNA6PVL3 124 aa8.48□□□□□ -1.05
SVIP-201ENST00000354193 CKS2P33552 79 aa8.48□□□□□ -1.05
SVIP-201ENST00000354193 Q6ZQT7 251 aa8.48□□□□□ -1.05
SVIP-201ENST00000354193 LTAP01374 205 aa8.48□□□□□ -1.05
SVIP-201ENST00000354193 FA2HQ7L5A8 372 aa8.48□□□□□ -1.05
SVIP-201ENST00000354193 LGALS1P09382 135 aaKnown RBP8.48□□□□□ -1.05
SVIP-201ENST00000354193 RAB4AP20338 218 aa8.48□□□□□ -1.05
SVIP-201ENST00000354193 FAM159AQ6UWV7 190 aa8.48□□□□□ -1.05
SVIP-201ENST00000354193 CLPSL1A2RUU4 121 aa8.47□□□□□ -1.05
SVIP-201ENST00000354193 CD7P09564 240 aa8.47□□□□□ -1.05
SVIP-201ENST00000354193 CD28P10747 220 aa8.47□□□□□ -1.05
SVIP-201ENST00000354193 ATOH7Q8N100 152 aa8.47□□□□□ -1.05
SVIP-201ENST00000354193 RNF114Q9Y508 228 aa8.47□□□□□ -1.05
SVIP-201ENST00000354193 LY96Q9Y6Y9 160 aa8.47□□□□□ -1.05
SVIP-201ENST00000354193 A0A096LNT2 108 aa8.47□□□□□ -1.05
SVIP-201ENST00000354193 S100A8P05109 93 aa8.47□□□□□ -1.05
SVIP-201ENST00000354193 HOXA5P20719 270 aa8.47□□□□□ -1.05
SVIP-201ENST00000354193 EVI2AP22794 236 aa8.47□□□□□ -1.05
SVIP-201ENST00000354193 ZNF80P51504 273 aaPredicted RBP8.47□□□□□ -1.05
SVIP-201ENST00000354193 TMEM136Q6ZRR5 245 aa8.47□□□□□ -1.05
SVIP-201ENST00000354193 LINC01619G3V211 115 aa8.46□□□□□ -1.05
SVIP-201ENST00000354193 MT-ND6P03923 174 aa8.46□□□□□ -1.05
SVIP-201ENST00000354193 SMIM17P0DL12 118 aa8.46□□□□□ -1.05
SVIP-201ENST00000354193 PSMB8P28062 276 aa8.46□□□□□ -1.05
SVIP-201ENST00000354193 AMN1Q8IY45 258 aa8.46□□□□□ -1.05
SVIP-201ENST00000354193 KLK9Q9UKQ9 250 aa8.46□□□□□ -1.05
SVIP-201ENST00000354193 ZNF124Q15973 351 aa8.46□□□□□ -1.05
SVIP-201ENST00000354193 C16orf54Q6UWD8 224 aa8.46□□□□□ -1.05
SVIP-201ENST00000354193 APRG1Q8IVJ8 170 aa8.46□□□□□ -1.05
SVIP-201ENST00000354193 UBE2E2Q96LR5 201 aa8.46□□□□□ -1.05
SVIP-201ENST00000354193 MS4A6AQ9H2W1 248 aa8.46□□□□□ -1.05
SVIP-201ENST00000354193 ESM1Q9NQ30 184 aa8.46□□□□□ -1.05
SVIP-201ENST00000354193 MSRB1Q9NZV6 116 aa8.46□□□□□ -1.05
SVIP-201ENST00000354193 NOTCH1P46531 2555 aa8.46□□□□□ -1.06
SVIP-201ENST00000354193 C1orf194Q5T5A4 169 aa8.46□□□□□ -1.06
SVIP-201ENST00000354193 OR8A1Q8NGG7 326 aa8.46□□□□□ -1.06
SVIP-201ENST00000354193 GTSF1Q8WW33 167 aa8.46□□□□□ -1.06
SVIP-201ENST00000354193 DLX4Q92988 240 aaPredicted RBP8.46□□□□□ -1.06
SVIP-201ENST00000354193 PRDM13Q9H4Q3 707 aa8.46□□□□□ -1.06
SVIP-201ENST00000354193 PEMTQ9UBM1 199 aa8.46□□□□□ -1.06
SVIP-201ENST00000354193 NBEAL2Q6ZNJ1 2754 aa8.45□□□□□ -1.06
SVIP-201ENST00000354193 C20orf173Q96LM9 149 aa8.45□□□□□ -1.06
SVIP-201ENST00000354193 CR1P17927 2039 aa8.45□□□□□ -1.06
SVIP-201ENST00000354193 HIST1H2BLQ99880 126 aa8.45□□□□□ -1.06
SVIP-201ENST00000354193 H3BUA1 57 aa8.44□□□□□ -1.06
SVIP-201ENST00000354193 MYCNOSP40205 109 aa8.44□□□□□ -1.06
SVIP-201ENST00000354193 CCL24O00175 119 aa8.44□□□□□ -1.06
SVIP-201ENST00000354193 BATFQ16520 125 aa8.44□□□□□ -1.06
SVIP-201ENST00000354193 HIST3H2BBQ8N257 126 aa8.44□□□□□ -1.06
SVIP-201ENST00000354193 MCRIP2Q9BUT9 160 aaKnown RBP8.44□□□□□ -1.06
SVIP-201ENST00000354193 NUPR1O60356 82 aa8.44□□□□□ -1.06
SVIP-201ENST00000354193 IGLV1-40P01703 118 aa8.44□□□□□ -1.06
SVIP-201ENST00000354193 EMP1P54849 157 aa8.44□□□□□ -1.06
SVIP-201ENST00000354193 DMRTA1Q5VZB9 504 aa8.44□□□□□ -1.06
SVIP-201ENST00000354193 TMEM61Q8N0U2 210 aa8.44□□□□□ -1.06
SVIP-201ENST00000354193 LINC00477Q96M19 166 aa8.44□□□□□ -1.06
SVIP-201ENST00000354193 FOXC2Q99958 501 aa8.44□□□□□ -1.06
SVIP-201ENST00000354193 PMCHL2Q9BQD1 86 aa8.44□□□□□ -1.06
SVIP-201ENST00000354193 C2orf70A6NJV1 201 aa8.44□□□□□ -1.06
SVIP-201ENST00000354193 CD5LO43866 347 aa8.44□□□□□ -1.06
SVIP-201ENST00000354193 AMBPP02760 352 aa8.44□□□□□ -1.06
SVIP-201ENST00000354193 KLF12Q9Y4X4 402 aa8.44□□□□□ -1.06
SVIP-201ENST00000354193 KMT2BQ9UMN6 2715 aaPredicted RBP8.43□□□□□ -1.06
SVIP-201ENST00000354193 RPL35AP18077 110 aaKnown RBP8.43□□□□□ -1.06
SVIP-201ENST00000354193 CRIP1P50238 77 aa8.43□□□□□ -1.06
SVIP-201ENST00000354193 LINC00518Q8N0U6 118 aa8.43□□□□□ -1.06
SVIP-201ENST00000354193 GNB1LQ9BYB4 327 aa8.43□□□□□ -1.06
SVIP-201ENST00000354193 XCL2Q9UBD3 114 aa8.43□□□□□ -1.06
SVIP-201ENST00000354193 PAM16Q9Y3D7 125 aa8.43□□□□□ -1.06
SVIP-201ENST00000354193 OVOL1O14753 267 aa8.43□□□□□ -1.06
SVIP-201ENST00000354193 GNRH2O43555 120 aa8.43□□□□□ -1.06
SVIP-201ENST00000354193 NBEAL1Q6ZS30 2694 aa8.43□□□□□ -1.06
SVIP-201ENST00000354193 IGHV3-73A0A0B4J1V6 119 aa8.43□□□□□ -1.06
SVIP-201ENST00000354193 GDF5OSQ5U4N7 250 aa8.43□□□□□ -1.06
SVIP-201ENST00000354193 KRTAP1-3Q8IUG1 177 aa8.43□□□□□ -1.06
SVIP-201ENST00000354193 C18orf15Q96N68 181 aa8.43□□□□□ -1.06
SVIP-201ENST00000354193 SMIM27A0A1W2PRY6 76 aa8.42□□□□□ -1.06
SVIP-201ENST00000354193 CBY3A6NI87 242 aa8.42□□□□□ -1.06
SVIP-201ENST00000354193 IGLV2-11P01706 119 aa8.42□□□□□ -1.06
SVIP-201ENST00000354193 OR10AG1Q8NH19 301 aa8.42□□□□□ -1.06
SVIP-201ENST00000354193 MBD6Q96DN6 1003 aa8.42□□□□□ -1.06
SVIP-201ENST00000354193 D6R8Y8 96 aa8.42□□□□□ -1.06
SVIP-201ENST00000354193 COX19Q49B96 90 aa8.42□□□□□ -1.06
SVIP-201ENST00000354193 RCHY1Q96PM5 261 aa8.42□□□□□ -1.06
SVIP-201ENST00000354193 TRAV21A0A0B4J279 112 aa8.42□□□□□ -1.06
SVIP-201ENST00000354193 UBE2CO00762 179 aa8.42□□□□□ -1.06
SVIP-201ENST00000354193 MRPS12O15235 138 aaKnown RBP8.42□□□□□ -1.06
SVIP-201ENST00000354193 ASIPP42127 132 aa8.42□□□□□ -1.06
SVIP-201ENST00000354193 C14orf178Q8N769 122 aaPredicted RBP8.42□□□□□ -1.06
SVIP-201ENST00000354193 LINC01006Q8NI28 216 aa8.42□□□□□ -1.06
SVIP-201ENST00000354193 JMJD8Q96S16 334 aa8.42□□□□□ -1.06
SVIP-201ENST00000354193 MLST8Q9BVC4 326 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms