RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 LINC01620Q4KN68 170 aa9.61□□□□□ -0.87
COL12A1-202ENST00000345356 TNS1Q9HBL0 1735 aaKnown RBP9.6□□□□□ -0.87
COL12A1-202ENST00000345356 TRGV1A0A0A0MS02 117 aa9.6□□□□□ -0.87
COL12A1-202ENST00000345356 TMEM258P61165 79 aa9.6□□□□□ -0.87
COL12A1-202ENST00000345356 C11orf1Q9H5F2 150 aa9.6□□□□□ -0.87
COL12A1-202ENST00000345356 C7orf69Q9H7B7 122 aa9.6□□□□□ -0.87
COL12A1-202ENST00000345356 KLHL30-AS1Q8NEE0 82 aa9.6□□□□□ -0.87
COL12A1-202ENST00000345356 RHPN1-AS1Q9BWJ2 59 aa9.6□□□□□ -0.87
COL12A1-202ENST00000345356 DUX4L9Q6RFH8 374 aaPredicted RBP9.6□□□□□ -0.87
COL12A1-202ENST00000345356 ROS1P08922 2347 aa9.6□□□□□ -0.87
COL12A1-202ENST00000345356 CACNA1EQ15878 2313 aa9.6□□□□□ -0.87
COL12A1-202ENST00000345356 A4D1N5 150 aa9.59□□□□□ -0.87
COL12A1-202ENST00000345356 ATOX1O00244 68 aa9.59□□□□□ -0.87
COL12A1-202ENST00000345356 CTRLP40313 264 aa9.59□□□□□ -0.87
COL12A1-202ENST00000345356 ZSWIM8A7E2V4 1837 aa9.59□□□□□ -0.87
COL12A1-202ENST00000345356 SPTBN1Q01082 2364 aaKnown RBP9.59□□□□□ -0.87
COL12A1-202ENST00000345356 KNCNA6PVL3 124 aa9.59□□□□□ -0.87
COL12A1-202ENST00000345356 A0A1B0GX51 115 aa9.59□□□□□ -0.87
COL12A1-202ENST00000345356 ZNF672Q499Z4 452 aaPredicted RBP9.59□□□□□ -0.87
COL12A1-202ENST00000345356 OOSP1A8MZH6 123 aa9.59□□□□□ -0.87
COL12A1-202ENST00000345356 TEX36Q5VZQ5 186 aa9.58□□□□□ -0.88
COL12A1-202ENST00000345356 INS-IGF2F8WCM5 200 aa9.58□□□□□ -0.88
COL12A1-202ENST00000345356 INSP01308 110 aa9.58□□□□□ -0.88
COL12A1-202ENST00000345356 HTN3P15516 51 aa9.58□□□□□ -0.88
COL12A1-202ENST00000345356 PFN2P35080 140 aa9.58□□□□□ -0.88
COL12A1-202ENST00000345356 MINOS1Q5TGZ0 78 aa9.58□□□□□ -0.88
COL12A1-202ENST00000345356 SPANXB1Q9NS25 103 aaPredicted RBP9.58□□□□□ -0.88
COL12A1-202ENST00000345356 MINOS1-NBL1R4GNA1 71 aa9.58□□□□□ -0.88
COL12A1-202ENST00000345356 GVINP1Q7Z2Y8 2422 aa9.58□□□□□ -0.88
COL12A1-202ENST00000345356 TMEM243Q9BU79 118 aa9.58□□□□□ -0.88
COL12A1-202ENST00000345356 C22orf46C9J442 243 aa9.57□□□□□ -0.88
COL12A1-202ENST00000345356 M0R1W7 72 aa9.57□□□□□ -0.88
COL12A1-202ENST00000345356 NDUFV3P56181 108 aaKnown RBP9.57□□□□□ -0.88
COL12A1-202ENST00000345356 CLUHP3Q96NS8 147 aa9.57□□□□□ -0.88
COL12A1-202ENST00000345356 THBDP07204 575 aa9.57□□□□□ -0.88
COL12A1-202ENST00000345356 MUSTN1Q8IVN3 82 aa9.57□□□□□ -0.88
COL12A1-202ENST00000345356 YLPM1P49750 1951 aaKnown RBP9.57□□□□□ -0.88
COL12A1-202ENST00000345356 TRAV13-2A0A0B4J235 113 aa9.57□□□□□ -0.88
COL12A1-202ENST00000345356 CFHR4Q92496 578 aa9.57□□□□□ -0.88
COL12A1-202ENST00000345356 MSRB1Q9NZV6 116 aa9.57□□□□□ -0.88
COL12A1-202ENST00000345356 POLEQ07864 2286 aa9.57□□□□□ -0.88
COL12A1-202ENST00000345356 A0A0B4J2C4 111 aa9.56□□□□□ -0.88
COL12A1-202ENST00000345356 RNASE13Q5GAN3 156 aaKnown RBP9.56□□□□□ -0.88
COL12A1-202ENST00000345356 CCL19Q99731 98 aa9.56□□□□□ -0.88
COL12A1-202ENST00000345356 VWA8A3KMH1 1905 aa9.56□□□□□ -0.88
COL12A1-202ENST00000345356 MYO7BQ6PIF6 2116 aa9.56□□□□□ -0.88
COL12A1-202ENST00000345356 DPH3Q96FX2 82 aa9.56□□□□□ -0.88
COL12A1-202ENST00000345356 ICOSQ9Y6W8 199 aa9.56□□□□□ -0.88
COL12A1-202ENST00000345356 ZNF491Q8N8L2 437 aa9.56□□□□□ -0.88
COL12A1-202ENST00000345356 PLA2G5P39877 138 aa9.56□□□□□ -0.88
COL12A1-202ENST00000345356 TCF20Q9UGU0 1960 aaKnown RBP9.56□□□□□ -0.88
COL12A1-202ENST00000345356 IGKV3D-7A0A0C4DH55 119 aa9.56□□□□□ -0.88
COL12A1-202ENST00000345356 GP9P14770 177 aa9.56□□□□□ -0.88
COL12A1-202ENST00000345356 DIAPH2-AS1Q14236 149 aa9.56□□□□□ -0.88
COL12A1-202ENST00000345356 PLXNA4Q9HCM2 1894 aa9.56□□□□□ -0.88
COL12A1-202ENST00000345356 KLK9Q9UKQ9 250 aa9.56□□□□□ -0.88
COL12A1-202ENST00000345356 TP53TG3Q9ULZ0 132 aa9.56□□□□□ -0.88
COL12A1-202ENST00000345356 ODF1Q14990 250 aa9.55□□□□□ -0.88
COL12A1-202ENST00000345356 A0A1W2PRX2 142 aa9.55□□□□□ -0.88
COL12A1-202ENST00000345356 FAM223BA6NKX1 122 aa9.55□□□□□ -0.88
COL12A1-202ENST00000345356 CRLF1O75462 422 aa9.55□□□□□ -0.88
COL12A1-202ENST00000345356 PATE2Q6UY27 113 aa9.55□□□□□ -0.88
COL12A1-202ENST00000345356 FAM223AQ8IWN6 122 aa9.55□□□□□ -0.88
COL12A1-202ENST00000345356 DYNAPQ8N1N2 210 aa9.55□□□□□ -0.88
COL12A1-202ENST00000345356 FAM167A-AS1Q96KT0 104 aa9.55□□□□□ -0.88
COL12A1-202ENST00000345356 TNRC6AQ8NDV7 1962 aaKnown RBP9.55□□□□□ -0.88
COL12A1-202ENST00000345356 FGF23Q9GZV9 251 aaPredicted RBP9.55□□□□□ -0.88
COL12A1-202ENST00000345356 PROK2Q9HC23 129 aa9.55□□□□□ -0.88
COL12A1-202ENST00000345356 MSRB2Q9Y3D2 182 aa9.55□□□□□ -0.88
COL12A1-202ENST00000345356 OVOL3O00110 214 aa9.54□□□□□ -0.88
COL12A1-202ENST00000345356 DAZ1Q9NQZ3 744 aaKnown RBP9.54□□□□□ -0.88
COL12A1-202ENST00000345356 IGHV3-38A0A0C4DH36 116 aa9.54□□□□□ -0.88
COL12A1-202ENST00000345356 TRBV10-2A0A0K0K1G8 114 aa9.54□□□□□ -0.88
COL12A1-202ENST00000345356 LTBP1Q14766 1721 aa9.54□□□□□ -0.88
COL12A1-202ENST00000345356 LTBRP36941 435 aa9.54□□□□□ -0.88
COL12A1-202ENST00000345356 MDS2Q8NDY4 140 aa9.54□□□□□ -0.88
COL12A1-202ENST00000345356 HELZP42694 1942 aaKnown RBP9.54□□□□□ -0.88
COL12A1-202ENST00000345356 ZNF883P0CG24 379 aa9.53□□□□□ -0.88
COL12A1-202ENST00000345356 SPINK13Q1W4C9 94 aa9.53□□□□□ -0.88
COL12A1-202ENST00000345356 ODF3L1Q8IXM7 274 aa9.53□□□□□ -0.88
COL12A1-202ENST00000345356 IGHV3-16A0A0C4DH30 117 aa9.53□□□□□ -0.88
COL12A1-202ENST00000345356 TMEM105Q8N8V8 129 aa9.53□□□□□ -0.88
COL12A1-202ENST00000345356 FAM110DQ8TAY7 271 aaPredicted RBP9.53□□□□□ -0.88
COL12A1-202ENST00000345356 RPL39LQ96EH5 51 aaKnown RBP9.53□□□□□ -0.88
COL12A1-202ENST00000345356 USMG5Q96IX5 58 aa9.53□□□□□ -0.88
COL12A1-202ENST00000345356 ARHGAP21Q5T5U3 1957 aa9.53□□□□□ -0.88
COL12A1-202ENST00000345356 NDUFC2O95298 119 aa9.53□□□□□ -0.88
COL12A1-202ENST00000345356 FOXE3Q13461 319 aa9.53□□□□□ -0.88
COL12A1-202ENST00000345356 ATP6V0E1O15342 81 aa9.53□□□□□ -0.88
COL12A1-202ENST00000345356 SPRY2O43597 315 aa9.53□□□□□ -0.88
COL12A1-202ENST00000345356 RPL32P62910 135 aaKnown RBP9.53□□□□□ -0.88
COL12A1-202ENST00000345356 PRSS22Q9GZN4 317 aa9.53□□□□□ -0.88
COL12A1-202ENST00000345356 DOPEY2Q9Y3R5 2298 aa9.52□□□□□ -0.88
COL12A1-202ENST00000345356 IGHV1-69DA0A0B4J2H0 117 aa9.52□□□□□ -0.89
COL12A1-202ENST00000345356 MGAMO43451 1857 aa9.52□□□□□ -0.89
COL12A1-202ENST00000345356 E9PLD3 99 aa9.52□□□□□ -0.89
COL12A1-202ENST00000345356 RHODO00212 210 aa9.52□□□□□ -0.89
COL12A1-202ENST00000345356 TCL1BO95988 128 aa9.52□□□□□ -0.89
COL12A1-202ENST00000345356 PF4P02776 101 aa9.52□□□□□ -0.89
COL12A1-202ENST00000345356 GDF5OSQ5U4N7 250 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms