RNA–Protein interactions for RNA: ENST00000344893.4

AC008543.1-201, humanhuman

TSL 2 BASIC

Gene AC008543.1, Length 3,383 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008543.1-201ENST00000344893 PPP1R35Q8TAP8 253 aa7.12□□□□□ -1.27
AC008543.1-201ENST00000344893 LEAP2Q969E1 77 aa7.12□□□□□ -1.27
AC008543.1-201ENST00000344893 AJUBAQ96IF1 538 aa7.12□□□□□ -1.27
AC008543.1-201ENST00000344893 RITA1Q96K30 269 aa7.12□□□□□ -1.27
AC008543.1-201ENST00000344893 ASCL2Q99929 193 aa7.12□□□□□ -1.27
AC008543.1-201ENST00000344893 SMKR1H3BMG3 65 aa7.12□□□□□ -1.27
AC008543.1-201ENST00000344893 IL4P05112 153 aa7.12□□□□□ -1.27
AC008543.1-201ENST00000344893 Q86TA4 180 aa7.12□□□□□ -1.27
AC008543.1-201ENST00000344893 GATD1Q8NB37 220 aa7.12□□□□□ -1.27
AC008543.1-201ENST00000344893 NPIPB3Q92617 1050 aa7.12□□□□□ -1.27
AC008543.1-201ENST00000344893 VCX2Q9H322 139 aa7.12□□□□□ -1.27
AC008543.1-201ENST00000344893 Q9H3A6 140 aa7.12□□□□□ -1.27
AC008543.1-201ENST00000344893 ZMAT4Q9H898 229 aa7.12□□□□□ -1.27
AC008543.1-201ENST00000344893 SSUH2Q9Y2M2 353 aa7.12□□□□□ -1.27
AC008543.1-201ENST00000344893 MYO9AB2RTY4 2548 aa7.12□□□□□ -1.27
AC008543.1-201ENST00000344893 TMEM213A2RRL7 107 aa7.11□□□□□ -1.27
AC008543.1-201ENST00000344893 HOXA3O43365 443 aaPredicted RBP7.11□□□□□ -1.27
AC008543.1-201ENST00000344893 EVI2AP22794 236 aa7.11□□□□□ -1.27
AC008543.1-201ENST00000344893 FAM90A1Q86YD7 464 aa7.11□□□□□ -1.27
AC008543.1-201ENST00000344893 TMEM133Q9H2Q1 129 aa7.11□□□□□ -1.27
AC008543.1-201ENST00000344893 PPDPFQ9H3Y8 114 aa7.11□□□□□ -1.27
AC008543.1-201ENST00000344893 TMEM160Q9NX00 188 aa7.11□□□□□ -1.27
AC008543.1-201ENST00000344893 SHISA9B4DS77 424 aa7.11□□□□□ -1.27
AC008543.1-201ENST00000344893 C19orf84I3L1E1 186 aa7.11□□□□□ -1.27
AC008543.1-201ENST00000344893 PRB4P10163 310 aaPredicted RBP7.11□□□□□ -1.27
AC008543.1-201ENST00000344893 ATP5J2P56134 94 aa7.11□□□□□ -1.27
AC008543.1-201ENST00000344893 UTF1Q5T230 341 aa7.11□□□□□ -1.27
AC008543.1-201ENST00000344893 TMEM158Q8WZ71 300 aa7.11□□□□□ -1.27
AC008543.1-201ENST00000344893 CCL13Q99616 98 aa7.11□□□□□ -1.27
AC008543.1-201ENST00000344893 FOXC2Q99958 501 aa7.11□□□□□ -1.27
AC008543.1-201ENST00000344893 VPREB3Q9UKI3 123 aa7.11□□□□□ -1.27
AC008543.1-201ENST00000344893 CSMD1Q96PZ7 3565 aa7.11□□□□□ -1.27
AC008543.1-201ENST00000344893 TMEM8BA6NDV4 472 aa7.11□□□□□ -1.27
AC008543.1-201ENST00000344893 TMEM262E9PQX1 116 aa7.11□□□□□ -1.27
AC008543.1-201ENST00000344893 NPYP01303 97 aa7.11□□□□□ -1.27
AC008543.1-201ENST00000344893 FAM104BQ5XKR9 115 aa7.11□□□□□ -1.27
AC008543.1-201ENST00000344893 FAM159AQ6UWV7 190 aa7.11□□□□□ -1.27
AC008543.1-201ENST00000344893 ZFP2Q6ZN57 461 aa7.11□□□□□ -1.27
AC008543.1-201ENST00000344893 FBXL15Q9H469 300 aa7.11□□□□□ -1.27
AC008543.1-201ENST00000344893 NGBQ9NPG2 151 aa7.11□□□□□ -1.27
AC008543.1-201ENST00000344893 M0QXV9 152 aa7.1□□□□□ -1.27
AC008543.1-201ENST00000344893 DPM2O94777 84 aa7.1□□□□□ -1.27
AC008543.1-201ENST00000344893 IFITM1P13164 125 aa7.1□□□□□ -1.27
AC008543.1-201ENST00000344893 GOLT1AQ6ZVE7 132 aa7.1□□□□□ -1.27
AC008543.1-201ENST00000344893 OR1L8Q8NGR8 309 aa7.1□□□□□ -1.27
AC008543.1-201ENST00000344893 MAP1LC3AQ9H492 121 aa7.1□□□□□ -1.27
AC008543.1-201ENST00000344893 U3KQK5 164 aa7.1□□□□□ -1.27
AC008543.1-201ENST00000344893 JMJD1CQ15652 2540 aa7.1□□□□□ -1.27
AC008543.1-201ENST00000344893 ZANQ9Y493 2812 aa7.1□□□□□ -1.27
AC008543.1-201ENST00000344893 TRAV4A0A0B4J268 109 aa7.1□□□□□ -1.27
AC008543.1-201ENST00000344893 TRAV40A0A0B4J280 105 aa7.1□□□□□ -1.27
AC008543.1-201ENST00000344893 ZNF785A8K8V0 405 aa7.1□□□□□ -1.27
AC008543.1-201ENST00000344893 H3BVH4 76 aa7.1□□□□□ -1.27
AC008543.1-201ENST00000344893 SNCGO76070 127 aa7.1□□□□□ -1.27
AC008543.1-201ENST00000344893 CKS2P33552 79 aa7.1□□□□□ -1.27
AC008543.1-201ENST00000344893 MRPL51Q4U2R6 128 aaKnown RBP7.1□□□□□ -1.27
AC008543.1-201ENST00000344893 ZNF493Q6ZR52 646 aa7.1□□□□□ -1.27
AC008543.1-201ENST00000344893 CELSR1Q9NYQ6 3014 aa7.1□□□□□ -1.27
AC008543.1-201ENST00000344893 DSCAMO60469 2012 aa7.1□□□□□ -1.27
AC008543.1-201ENST00000344893 TRBV7-3A0A075B6L6 115 aa7.09□□□□□ -1.27
AC008543.1-201ENST00000344893 CENPVL3A0A0U1RRI6 287 aa7.09□□□□□ -1.27
AC008543.1-201ENST00000344893 E7EQL1 145 aa7.09□□□□□ -1.27
AC008543.1-201ENST00000344893 ADIPOQQ15848 244 aa7.09□□□□□ -1.27
AC008543.1-201ENST00000344893 FAM216BQ8N7L0 139 aa7.09□□□□□ -1.27
AC008543.1-201ENST00000344893 PRRC2AP48634 2157 aaKnown RBP7.09□□□□□ -1.27
AC008543.1-201ENST00000344893 LINC01549A6NIU2 74 aa7.09□□□□□ -1.27
AC008543.1-201ENST00000344893 UPK2O00526 184 aa7.09□□□□□ -1.27
AC008543.1-201ENST00000344893 GLRXP35754 106 aa7.09□□□□□ -1.27
AC008543.1-201ENST00000344893 LEPP41159 167 aa7.09□□□□□ -1.27
AC008543.1-201ENST00000344893 GCN1Q92616 2671 aaKnown RBP7.09□□□□□ -1.27
AC008543.1-201ENST00000344893 TWIST1Q15672 202 aa7.09□□□□□ -1.27
AC008543.1-201ENST00000344893 C1orf162Q8NEQ5 155 aaPredicted RBP7.09□□□□□ -1.27
AC008543.1-201ENST00000344893 RAB1BQ9H0U4 201 aa7.09□□□□□ -1.27
AC008543.1-201ENST00000344893 CXXC4Q9H2H0 198 aa7.09□□□□□ -1.27
AC008543.1-201ENST00000344893 IGKV1D-37A0A075B6S9 117 aa7.08□□□□□ -1.28
AC008543.1-201ENST00000344893 CRLF1O75462 422 aa7.08□□□□□ -1.28
AC008543.1-201ENST00000344893 IGLV2-11P01706 119 aa7.08□□□□□ -1.28
AC008543.1-201ENST00000344893 SAA2P0DJI9 122 aaPredicted RBP7.08□□□□□ -1.28
AC008543.1-201ENST00000344893 LOXL3P58215 753 aa7.08□□□□□ -1.28
AC008543.1-201ENST00000344893 MEIG1Q5JSS6 88 aa7.08□□□□□ -1.28
AC008543.1-201ENST00000344893 LYZL1Q6UWQ5 148 aa7.08□□□□□ -1.28
AC008543.1-201ENST00000344893 PLXNB1O43157 2135 aa7.08□□□□□ -1.28
AC008543.1-201ENST00000344893 A8MWV9 139 aa7.08□□□□□ -1.28
AC008543.1-201ENST00000344893 IGHV1-46P01743 117 aa7.08□□□□□ -1.28
AC008543.1-201ENST00000344893 HLA-DRB4P13762 266 aa7.08□□□□□ -1.28
AC008543.1-201ENST00000344893 ATP5IP56385 69 aaPredicted RBP7.08□□□□□ -1.28
AC008543.1-201ENST00000344893 EXOC3-AS1Q8N2X6 119 aa7.08□□□□□ -1.28
AC008543.1-201ENST00000344893 ANKRD29Q8N6D5 301 aa7.08□□□□□ -1.28
AC008543.1-201ENST00000344893 RPEQ96AT9 228 aa7.08□□□□□ -1.28
AC008543.1-201ENST00000344893 RAB9BQ9NP90 201 aa7.08□□□□□ -1.28
AC008543.1-201ENST00000344893 MRPL36Q9P0J6 103 aaKnown RBP7.08□□□□□ -1.28
AC008543.1-201ENST00000344893 HLA-DRB4X5D2U9 266 aa7.08□□□□□ -1.28
AC008543.1-201ENST00000344893 ITPR2Q14571 2701 aa7.08□□□□□ -1.28
AC008543.1-201ENST00000344893 TGFAP01135 160 aa7.08□□□□□ -1.28
AC008543.1-201ENST00000344893 IGKV1-16P04430 117 aa7.08□□□□□ -1.28
AC008543.1-201ENST00000344893 PPP1R27Q86WC6 154 aa7.08□□□□□ -1.28
AC008543.1-201ENST00000344893 C11orf53Q8IXP5 236 aa7.08□□□□□ -1.28
AC008543.1-201ENST00000344893 IGFBPL1Q8WX77 278 aa7.08□□□□□ -1.28
AC008543.1-201ENST00000344893 RNASE6Q93091 150 aaKnown RBP7.08□□□□□ -1.28
AC008543.1-201ENST00000344893 IQCF6A8MYZ5 107 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms