RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 UBE2D2P62837 147 aa7.45□□□□□ -1.22
HOXA1-201ENST00000343060 IGFL3Q6UXB1 125 aa7.45□□□□□ -1.22
HOXA1-201ENST00000343060 SYT8Q8NBV8 401 aa7.45□□□□□ -1.22
HOXA1-201ENST00000343060 OR11H6Q8NGC7 330 aa7.45□□□□□ -1.22
HOXA1-201ENST00000343060 PGPEP1Q9NXJ5 209 aa7.45□□□□□ -1.22
HOXA1-201ENST00000343060 C11orf21Q9P2W6 132 aa7.45□□□□□ -1.22
HOXA1-201ENST00000343060 ZGRF1Q86YA3 2104 aa7.44□□□□□ -1.22
HOXA1-201ENST00000343060 A6NJY4 79 aa7.44□□□□□ -1.22
HOXA1-201ENST00000343060 EFNA4P52798 201 aa7.44□□□□□ -1.22
HOXA1-201ENST00000343060 PRB3Q04118 309 aaPredicted RBP7.44□□□□□ -1.22
HOXA1-201ENST00000343060 Q5PR19 223 aa7.44□□□□□ -1.22
HOXA1-201ENST00000343060 NFE4Q86UQ8 179 aa7.44□□□□□ -1.22
HOXA1-201ENST00000343060 SMIM2Q9BVW6 85 aa7.44□□□□□ -1.22
HOXA1-201ENST00000343060 PRAC2D3DTV9 90 aa7.44□□□□□ -1.22
HOXA1-201ENST00000343060 TSPAN13O95857 204 aa7.44□□□□□ -1.22
HOXA1-201ENST00000343060 ERCC8Q13216 396 aa7.44□□□□□ -1.22
HOXA1-201ENST00000343060 C5orf64Q2M2E5 130 aa7.44□□□□□ -1.22
HOXA1-201ENST00000343060 IGFL4Q6B9Z1 124 aa7.44□□□□□ -1.22
HOXA1-201ENST00000343060 Q6ZUT4 128 aa7.44□□□□□ -1.22
HOXA1-201ENST00000343060 SBSPONQ8IVN8 264 aa7.44□□□□□ -1.22
HOXA1-201ENST00000343060 NEXN-AS1Q8NBZ9 246 aa7.44□□□□□ -1.22
HOXA1-201ENST00000343060 FAM57AQ8TBR7 257 aa7.44□□□□□ -1.22
HOXA1-201ENST00000343060 TOMM6Q96B49 74 aa7.44□□□□□ -1.22
HOXA1-201ENST00000343060 SCGB2A1O75556 95 aa7.43□□□□□ -1.22
HOXA1-201ENST00000343060 SPINK8P0C7L1 97 aa7.43□□□□□ -1.22
HOXA1-201ENST00000343060 COX6B1P14854 86 aa7.43□□□□□ -1.22
HOXA1-201ENST00000343060 PPIFP30405 207 aaKnown RBP7.43□□□□□ -1.22
HOXA1-201ENST00000343060 VCX2Q9H322 139 aa7.43□□□□□ -1.22
HOXA1-201ENST00000343060 MT-ATP8P03928 68 aa7.43□□□□□ -1.22
HOXA1-201ENST00000343060 CTSGP08311 255 aa7.43□□□□□ -1.22
HOXA1-201ENST00000343060 DEFB109BQ30KR1 87 aa7.43□□□□□ -1.22
HOXA1-201ENST00000343060 TMEM78Q5T7P6 136 aa7.43□□□□□ -1.22
HOXA1-201ENST00000343060 PPDPFLQ8WWR9 84 aa7.43□□□□□ -1.22
HOXA1-201ENST00000343060 SLC50A1Q9BRV3 221 aa7.43□□□□□ -1.22
HOXA1-201ENST00000343060 DYNLRB1Q9NP97 96 aa7.43□□□□□ -1.22
HOXA1-201ENST00000343060 TRAV26-2A0A0B4J265 109 aa7.42□□□□□ -1.22
HOXA1-201ENST00000343060 CD7P09564 240 aa7.42□□□□□ -1.22
HOXA1-201ENST00000343060 XGP55808 180 aa7.42□□□□□ -1.22
HOXA1-201ENST00000343060 NDPQ00604 133 aa7.42□□□□□ -1.22
HOXA1-201ENST00000343060 ORMDL2Q53FV1 153 aa7.42□□□□□ -1.22
HOXA1-201ENST00000343060 LYRM7Q5U5X0 104 aa7.42□□□□□ -1.22
HOXA1-201ENST00000343060 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.42□□□□□ -1.22
HOXA1-201ENST00000343060 MRPL53Q96EL3 112 aaKnown RBP7.42□□□□□ -1.22
HOXA1-201ENST00000343060 CUL9Q8IWT3 2517 aa7.42□□□□□ -1.22
HOXA1-201ENST00000343060 TEN1Q86WV5 123 aa7.42□□□□□ -1.22
HOXA1-201ENST00000343060 LY6G5BQ8NDX9 201 aa7.42□□□□□ -1.22
HOXA1-201ENST00000343060 CARD19Q96LW7 228 aa7.42□□□□□ -1.22
HOXA1-201ENST00000343060 PRADC1Q9BSG0 188 aa7.42□□□□□ -1.22
HOXA1-201ENST00000343060 RAXQ9Y2V3 346 aa7.42□□□□□ -1.22
HOXA1-201ENST00000343060 CENPVL3A0A0U1RRI6 287 aa7.41□□□□□ -1.22
HOXA1-201ENST00000343060 LINC01549A6NIU2 74 aa7.41□□□□□ -1.22
HOXA1-201ENST00000343060 DPM3Q9P2X0 92 aa7.41□□□□□ -1.22
HOXA1-201ENST00000343060 ERG28Q9UKR5 140 aa7.41□□□□□ -1.22
HOXA1-201ENST00000343060 LOC400499M0QZD8 3231 aa7.41□□□□□ -1.22
HOXA1-201ENST00000343060 A0A0G2JNJ9 132 aa7.41□□□□□ -1.22
HOXA1-201ENST00000343060 E7EQL1 145 aa7.41□□□□□ -1.22
HOXA1-201ENST00000343060 KLK9Q2XQG4 91 aa7.41□□□□□ -1.22
HOXA1-201ENST00000343060 SCGB3A1Q96QR1 104 aa7.41□□□□□ -1.22
HOXA1-201ENST00000343060 AGPAT4-IT1Q9H0P7 198 aa7.41□□□□□ -1.22
HOXA1-201ENST00000343060 ZFAND3Q9H8U3 227 aa7.41□□□□□ -1.22
HOXA1-201ENST00000343060 HIF1ANQ9NWT6 349 aa7.41□□□□□ -1.22
HOXA1-201ENST00000343060 Q9UFV3 132 aa7.41□□□□□ -1.22
HOXA1-201ENST00000343060 KLK9Q9UKQ9 250 aa7.41□□□□□ -1.22
HOXA1-201ENST00000343060 BUB3O43684 328 aa7.4□□□□□ -1.22
HOXA1-201ENST00000343060 BAALCQ8WXS3 180 aa7.4□□□□□ -1.22
HOXA1-201ENST00000343060 UFC1Q9Y3C8 167 aa7.4□□□□□ -1.22
HOXA1-201ENST00000343060 MSRB2Q9Y3D2 182 aa7.4□□□□□ -1.22
HOXA1-201ENST00000343060 CFAP47Q6ZTR5 3102 aa7.4□□□□□ -1.22
HOXA1-201ENST00000343060 ZNF815PA8K554 130 aa7.4□□□□□ -1.23
HOXA1-201ENST00000343060 ODF3BA8MYP8 253 aa7.4□□□□□ -1.23
HOXA1-201ENST00000343060 M0QXV9 152 aa7.4□□□□□ -1.23
HOXA1-201ENST00000343060 Q8N6K4 173 aa7.4□□□□□ -1.23
HOXA1-201ENST00000343060 RASL10AQ92737 203 aa7.4□□□□□ -1.23
HOXA1-201ENST00000343060 TRBV20-1A0A075B6N2 111 aa7.39□□□□□ -1.23
HOXA1-201ENST00000343060 RNF223E7ERA6 249 aa7.39□□□□□ -1.23
HOXA1-201ENST00000343060 IGHV3-23P01764 117 aa7.39□□□□□ -1.23
HOXA1-201ENST00000343060 SUMO2P61956 95 aaKnown RBP7.39□□□□□ -1.23
HOXA1-201ENST00000343060 C9orf47Q6ZRZ4 202 aa7.39□□□□□ -1.23
HOXA1-201ENST00000343060 RNF182Q8N6D2 247 aa7.39□□□□□ -1.23
HOXA1-201ENST00000343060 GLMPQ8WWB7 406 aa7.39□□□□□ -1.23
HOXA1-201ENST00000343060 PLEKHB2Q96CS7 222 aa7.39□□□□□ -1.23
HOXA1-201ENST00000343060 ZFHX4Q86UP3 3567 aa7.39□□□□□ -1.23
HOXA1-201ENST00000343060 ZZEF1O43149 2961 aa7.39□□□□□ -1.23
HOXA1-201ENST00000343060 TRAV8-2A0A0B4J237 113 aa7.39□□□□□ -1.23
HOXA1-201ENST00000343060 M0R381 172 aa7.39□□□□□ -1.23
HOXA1-201ENST00000343060 PSMB2P49721 201 aa7.39□□□□□ -1.23
HOXA1-201ENST00000343060 ZFP2Q6ZN57 461 aa7.39□□□□□ -1.23
HOXA1-201ENST00000343060 NDUFA11Q86Y39 141 aa7.39□□□□□ -1.23
HOXA1-201ENST00000343060 ROS1P08922 2347 aa7.39□□□□□ -1.23
HOXA1-201ENST00000343060 PRSS29PA6NIE9 313 aa7.38□□□□□ -1.23
HOXA1-201ENST00000343060 SPANXN1Q5VSR9 72 aa7.38□□□□□ -1.23
HOXA1-201ENST00000343060 TRIOBPQ9H2D6 2365 aa7.38□□□□□ -1.23
HOXA1-201ENST00000343060 NCOR1O75376 2440 aa7.38□□□□□ -1.23
HOXA1-201ENST00000343060 PKDREJQ9NTG1 2253 aa7.38□□□□□ -1.23
HOXA1-201ENST00000343060 CLPSL1A2RUU4 121 aa7.38□□□□□ -1.23
HOXA1-201ENST00000343060 B9A039 149 aa7.38□□□□□ -1.23
HOXA1-201ENST00000343060 IGF2-ASQ6U949 168 aa7.38□□□□□ -1.23
HOXA1-201ENST00000343060 ONECUT1Q9UBC0 465 aa7.38□□□□□ -1.23
HOXA1-201ENST00000343060 COLQQ9Y215 455 aaPredicted RBP7.38□□□□□ -1.23
HOXA1-201ENST00000343060 A0A0J9YY99 117 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms