RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 CLPSL2Q6UWE3 100 aa11.88□□□□□ -0.51
UBE3B-202ENST00000342494 C1orf147Q96MC9 270 aaPredicted RBP11.87□□□□□ -0.51
UBE3B-202ENST00000342494 BDP1A6H8Y1 2624 aa11.87□□□□□ -0.51
UBE3B-202ENST00000342494 ZNF524Q96C55 264 aa11.87□□□□□ -0.51
UBE3B-202ENST00000342494 PLXNA3P51805 1871 aa11.87□□□□□ -0.51
UBE3B-202ENST00000342494 IGFL2Q6UWQ7 119 aa11.87□□□□□ -0.51
UBE3B-202ENST00000342494 PIFOQ8TCI5 191 aa11.87□□□□□ -0.51
UBE3B-202ENST00000342494 PTPRQQ9UMZ3 2332 aa11.87□□□□□ -0.51
UBE3B-202ENST00000342494 IGHV4-38-2P0DP08 117 aa11.87□□□□□ -0.51
UBE3B-202ENST00000342494 ANAPC13Q9BS18 74 aa11.87□□□□□ -0.51
UBE3B-202ENST00000342494 GP9P14770 177 aa11.86□□□□□ -0.51
UBE3B-202ENST00000342494 RSPO1Q2MKA7 263 aaPredicted RBP11.86□□□□□ -0.51
UBE3B-202ENST00000342494 DKK4Q9UBT3 224 aa11.86□□□□□ -0.51
UBE3B-202ENST00000342494 IGLV2-23P01705 113 aa11.86□□□□□ -0.51
UBE3B-202ENST00000342494 MRPL53Q96EL3 112 aaKnown RBP11.86□□□□□ -0.51
UBE3B-202ENST00000342494 MED13LQ71F56 2210 aa11.86□□□□□ -0.51
UBE3B-202ENST00000342494 IGHV1-24A0A0C4DH33 117 aa11.86□□□□□ -0.51
UBE3B-202ENST00000342494 CENPVL3A0A0U1RRI6 287 aa11.86□□□□□ -0.51
UBE3B-202ENST00000342494 UBE2BP63146 152 aa11.86□□□□□ -0.51
UBE3B-202ENST00000342494 GAGE2AQ6NT46 116 aa11.86□□□□□ -0.51
UBE3B-202ENST00000342494 FOXE3Q13461 319 aa11.85□□□□□ -0.51
UBE3B-202ENST00000342494 OCIAD2Q56VL3 154 aa11.85□□□□□ -0.51
UBE3B-202ENST00000342494 STPG4Q8N801 248 aa11.85□□□□□ -0.51
UBE3B-202ENST00000342494 NRGNQ92686 78 aa11.85□□□□□ -0.51
UBE3B-202ENST00000342494 Q9HAA7 133 aa11.85□□□□□ -0.51
UBE3B-202ENST00000342494 KIAA1671Q9BY89 1806 aa11.85□□□□□ -0.51
UBE3B-202ENST00000342494 PRSS57Q6UWY2 283 aa11.85□□□□□ -0.51
UBE3B-202ENST00000342494 CYYR1Q96J86 154 aa11.85□□□□□ -0.51
UBE3B-202ENST00000342494 SUMO4Q6EEV6 95 aa11.85□□□□□ -0.51
UBE3B-202ENST00000342494 MRPL51Q4U2R6 128 aaKnown RBP11.85□□□□□ -0.51
UBE3B-202ENST00000342494 C8orf31Q8N9H6 132 aa11.85□□□□□ -0.51
UBE3B-202ENST00000342494 EDA2RQ9HAV5 297 aa11.85□□□□□ -0.51
UBE3B-202ENST00000342494 GAGE2BQ13066 116 aa11.84□□□□□ -0.51
UBE3B-202ENST00000342494 MPV17L2Q567V2 206 aa11.84□□□□□ -0.51
UBE3B-202ENST00000342494 VOPP1Q96AW1 172 aa11.84□□□□□ -0.51
UBE3B-202ENST00000342494 F6UB75 175 aa11.84□□□□□ -0.51
UBE3B-202ENST00000342494 SLURP1P55000 103 aa11.84□□□□□ -0.51
UBE3B-202ENST00000342494 ZNF491Q8N8L2 437 aa11.84□□□□□ -0.51
UBE3B-202ENST00000342494 OR11H6Q8NGC7 330 aa11.84□□□□□ -0.51
UBE3B-202ENST00000342494 U3KQE9 123 aa11.84□□□□□ -0.51
UBE3B-202ENST00000342494 SIGMAR1Q99720 223 aa11.84□□□□□ -0.51
UBE3B-202ENST00000342494 SRSF2Q01130 221 aaKnown RBP11.83□□□□□ -0.51
UBE3B-202ENST00000342494 TRAV25A0A0B4J276 109 aa11.83□□□□□ -0.52
UBE3B-202ENST00000342494 KIR3DS1Q14943 382 aa11.83□□□□□ -0.52
UBE3B-202ENST00000342494 C10orf105Q8TEF2 133 aa11.83□□□□□ -0.52
UBE3B-202ENST00000342494 PYGO2Q9BRQ0 406 aa11.83□□□□□ -0.52
UBE3B-202ENST00000342494 H3BMM0 161 aa11.83□□□□□ -0.52
UBE3B-202ENST00000342494 TAL2Q16559 108 aa11.83□□□□□ -0.52
UBE3B-202ENST00000342494 RBMY1FQ15415 496 aaKnown RBP11.83□□□□□ -0.52
UBE3B-202ENST00000342494 SCRT2Q9NQ03 307 aa11.83□□□□□ -0.52
UBE3B-202ENST00000342494 ZSWIM8A7E2V4 1837 aa11.83□□□□□ -0.52
UBE3B-202ENST00000342494 MALRD1Q5VYJ5 2156 aa11.83□□□□□ -0.52
UBE3B-202ENST00000342494 NOTCH2Q04721 2471 aa11.83□□□□□ -0.52
UBE3B-202ENST00000342494 ADORA2A-AS1P86434 159 aa11.83□□□□□ -0.52
UBE3B-202ENST00000342494 ARTNQ5T4W7 220 aa11.83□□□□□ -0.52
UBE3B-202ENST00000342494 APRG1Q8IVJ8 170 aa11.82□□□□□ -0.52
UBE3B-202ENST00000342494 NDUFA12Q9UI09 145 aa11.82□□□□□ -0.52
UBE3B-202ENST00000342494 C9JAW5 83 aa11.82□□□□□ -0.52
UBE3B-202ENST00000342494 MGAMO43451 1857 aa11.82□□□□□ -0.52
UBE3B-202ENST00000342494 HERVK_113P63121 156 aa11.81□□□□□ -0.52
UBE3B-202ENST00000342494 UBE2WQ96B02 151 aa11.81□□□□□ -0.52
UBE3B-202ENST00000342494 ZC2HC1AQ96GY0 325 aa11.81□□□□□ -0.52
UBE3B-202ENST00000342494 POU2AF1Q16633 256 aa11.81□□□□□ -0.52
UBE3B-202ENST00000342494 C1orf43Q9BWL3 253 aa11.81□□□□□ -0.52
UBE3B-202ENST00000342494 TEX48A0A1B0GUV7 120 aa11.81□□□□□ -0.52
UBE3B-202ENST00000342494 CCL18P55774 89 aa11.81□□□□□ -0.52
UBE3B-202ENST00000342494 Q6ZQT7 251 aa11.81□□□□□ -0.52
UBE3B-202ENST00000342494 C18orf32Q8TCD1 76 aa11.81□□□□□ -0.52
UBE3B-202ENST00000342494 GTF3C1Q12789 2109 aa11.81□□□□□ -0.52
UBE3B-202ENST00000342494 SOCS3O14543 225 aa11.81□□□□□ -0.52
UBE3B-202ENST00000342494 BLCAPP62952 87 aa11.81□□□□□ -0.52
UBE3B-202ENST00000342494 XCL1P47992 114 aa11.81□□□□□ -0.52
UBE3B-202ENST00000342494 ZGRF1Q86YA3 2104 aa11.81□□□□□ -0.52
UBE3B-202ENST00000342494 SMIM2Q9BVW6 85 aa11.81□□□□□ -0.52
UBE3B-202ENST00000342494 IGFBPL1Q8WX77 278 aa11.8□□□□□ -0.52
UBE3B-202ENST00000342494 SPART-AS1P0CW21 52 aa11.8□□□□□ -0.52
UBE3B-202ENST00000342494 FXYD5Q96DB9 178 aa11.8□□□□□ -0.52
UBE3B-202ENST00000342494 LOC105371267A0A1B0GV96 52 aa11.8□□□□□ -0.52
UBE3B-202ENST00000342494 IGLC7A0M8Q6 106 aa11.8□□□□□ -0.52
UBE3B-202ENST00000342494 Q0VG73 95 aa11.8□□□□□ -0.52
UBE3B-202ENST00000342494 WDR81Q562E7 1941 aa11.8□□□□□ -0.52
UBE3B-202ENST00000342494 HLA-DMBP28068 263 aa11.79□□□□□ -0.52
UBE3B-202ENST00000342494 FAM231DQ6ZW35 169 aa11.79□□□□□ -0.52
UBE3B-202ENST00000342494 SIP14410 1827 aa11.79□□□□□ -0.52
UBE3B-202ENST00000342494 TTC28Q96AY4 2481 aa11.79□□□□□ -0.52
UBE3B-202ENST00000342494 GNRH2O43555 120 aa11.79□□□□□ -0.52
UBE3B-202ENST00000342494 RNASE13Q5GAN3 156 aaKnown RBP11.79□□□□□ -0.52
UBE3B-202ENST00000342494 C11orf53Q8IXP5 236 aa11.79□□□□□ -0.52
UBE3B-202ENST00000342494 RLFQ13129 1914 aa11.79□□□□□ -0.52
UBE3B-202ENST00000342494 A8MWP6 167 aa11.79□□□□□ -0.52
UBE3B-202ENST00000342494 DAZAP2Q15038 168 aaPredicted RBP11.79□□□□□ -0.52
UBE3B-202ENST00000342494 ZFAND6Q6FIF0 208 aa11.78□□□□□ -0.52
UBE3B-202ENST00000342494 DYNAPQ8N1N2 210 aa11.78□□□□□ -0.52
UBE3B-202ENST00000342494 ATP5G1P05496 136 aa11.78□□□□□ -0.52
UBE3B-202ENST00000342494 PKIGQ9Y2B9 76 aa11.78□□□□□ -0.52
UBE3B-202ENST00000342494 PCNX2A6NKB5 2137 aa11.78□□□□□ -0.52
UBE3B-202ENST00000342494 SPRNQ5BIV9 151 aa11.78□□□□□ -0.52
UBE3B-202ENST00000342494 AJUBAQ96IF1 538 aa11.78□□□□□ -0.52
UBE3B-202ENST00000342494 AGPAT4-IT1Q9H0P7 198 aa11.78□□□□□ -0.52
UBE3B-202ENST00000342494 CRLF1O75462 422 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms