RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 NEU4Q8WWR8 484 aaPredicted RBP9.8□□□□□ -0.84
SNRNP48-201ENST00000342415 MRPL35Q9NZE8 188 aaKnown RBP9.8□□□□□ -0.84
SNRNP48-201ENST00000342415 IGHV2-70DA0A0C4DH43 119 aa9.8□□□□□ -0.84
SNRNP48-201ENST00000342415 A0A0U1RRA0 63 aa9.8□□□□□ -0.84
SNRNP48-201ENST00000342415 H3BRN7 92 aa9.8□□□□□ -0.84
SNRNP48-201ENST00000342415 ATP6V0E1O15342 81 aa9.8□□□□□ -0.84
SNRNP48-201ENST00000342415 DEFB125Q8N687 156 aa9.8□□□□□ -0.84
SNRNP48-201ENST00000342415 TNRC6AQ8NDV7 1962 aaKnown RBP9.79□□□□□ -0.84
SNRNP48-201ENST00000342415 A0A087WWL8 130 aa9.79□□□□□ -0.84
SNRNP48-201ENST00000342415 LINC00311Q8N616 119 aa9.79□□□□□ -0.84
SNRNP48-201ENST00000342415 SAA4P35542 130 aa9.79□□□□□ -0.84
SNRNP48-201ENST00000342415 C7orf69Q9H7B7 122 aa9.79□□□□□ -0.84
SNRNP48-201ENST00000342415 K7EIM0 57 aa9.79□□□□□ -0.84
SNRNP48-201ENST00000342415 TAX1BP3O14907 124 aa9.79□□□□□ -0.84
SNRNP48-201ENST00000342415 IGLV2-23P01705 113 aa9.79□□□□□ -0.84
SNRNP48-201ENST00000342415 RPL13AP40429 203 aaKnown RBP9.79□□□□□ -0.84
SNRNP48-201ENST00000342415 OR5A1Q8NGJ0 315 aa9.79□□□□□ -0.84
SNRNP48-201ENST00000342415 HOXA3O43365 443 aaPredicted RBP9.78□□□□□ -0.84
SNRNP48-201ENST00000342415 GAGE13Q4V321 117 aa9.78□□□□□ -0.84
SNRNP48-201ENST00000342415 ADAMTSL5Q6ZMM2 481 aa9.78□□□□□ -0.84
SNRNP48-201ENST00000342415 MAP1AP78559 2803 aaPredicted RBP9.78□□□□□ -0.84
SNRNP48-201ENST00000342415 IGHV3-73A0A0B4J1V6 119 aa9.78□□□□□ -0.84
SNRNP48-201ENST00000342415 IGKV3OR2-268A0A0C4DH90 116 aa9.78□□□□□ -0.84
SNRNP48-201ENST00000342415 DTX2Q86UW9 622 aa9.78□□□□□ -0.84
SNRNP48-201ENST00000342415 DYNAPQ8N1N2 210 aa9.78□□□□□ -0.84
SNRNP48-201ENST00000342415 ZNF688P0C7X2 276 aa9.78□□□□□ -0.84
SNRNP48-201ENST00000342415 PRTN3P24158 256 aa9.78□□□□□ -0.84
SNRNP48-201ENST00000342415 COL6A3P12111 3177 aa9.78□□□□□ -0.84
SNRNP48-201ENST00000342415 C9orf118A6NHY6 69 aa9.78□□□□□ -0.84
SNRNP48-201ENST00000342415 CR1LQ2VPA4 569 aa9.78□□□□□ -0.84
SNRNP48-201ENST00000342415 BPESC1Q9GZL8 116 aa9.78□□□□□ -0.84
SNRNP48-201ENST00000342415 RUSC1-AS1Q66K80 236 aa9.77□□□□□ -0.85
SNRNP48-201ENST00000342415 TRAV2A0A0B4J234 112 aa9.77□□□□□ -0.85
SNRNP48-201ENST00000342415 TRAV21A0A0B4J279 112 aa9.77□□□□□ -0.85
SNRNP48-201ENST00000342415 VWC2LB2RUY7 222 aa9.77□□□□□ -0.85
SNRNP48-201ENST00000342415 H3BMG7 143 aa9.77□□□□□ -0.85
SNRNP48-201ENST00000342415 FCN3O75636 299 aa9.77□□□□□ -0.85
SNRNP48-201ENST00000342415 NPC2P61916 151 aa9.77□□□□□ -0.85
SNRNP48-201ENST00000342415 SIGMAR1Q99720 223 aa9.77□□□□□ -0.85
SNRNP48-201ENST00000342415 TRAV12-3A0A0B4J271 114 aa9.77□□□□□ -0.85
SNRNP48-201ENST00000342415 I3L2K1 104 aa9.77□□□□□ -0.85
SNRNP48-201ENST00000342415 DEFB1P60022 68 aa9.77□□□□□ -0.85
SNRNP48-201ENST00000342415 PDE6HQ13956 83 aa9.77□□□□□ -0.85
SNRNP48-201ENST00000342415 DUX5Q96PT3 197 aa9.77□□□□□ -0.85
SNRNP48-201ENST00000342415 RNF5Q99942 180 aa9.77□□□□□ -0.85
SNRNP48-201ENST00000342415 PAX1P15863 534 aa9.76□□□□□ -0.85
SNRNP48-201ENST00000342415 CTRLP40313 264 aa9.76□□□□□ -0.85
SNRNP48-201ENST00000342415 MBD6Q96DN6 1003 aa9.76□□□□□ -0.85
SNRNP48-201ENST00000342415 PGPEP1Q9NXJ5 209 aa9.76□□□□□ -0.85
SNRNP48-201ENST00000342415 TMEM14CQ9P0S9 112 aa9.76□□□□□ -0.85
SNRNP48-201ENST00000342415 MTORP42345 2549 aa9.76□□□□□ -0.85
SNRNP48-201ENST00000342415 TRAV41A0A0B4J266 112 aa9.76□□□□□ -0.85
SNRNP48-201ENST00000342415 SHISA9B4DS77 424 aa9.76□□□□□ -0.85
SNRNP48-201ENST00000342415 SP5Q6BEB4 398 aaPredicted RBP9.76□□□□□ -0.85
SNRNP48-201ENST00000342415 REV3LO60673 3130 aa9.76□□□□□ -0.85
SNRNP48-201ENST00000342415 F6UB75 175 aa9.76□□□□□ -0.85
SNRNP48-201ENST00000342415 PAX2Q02962 417 aa9.76□□□□□ -0.85
SNRNP48-201ENST00000342415 EXPH5Q8NEV8 1989 aa9.76□□□□□ -0.85
SNRNP48-201ENST00000342415 FOXE3Q13461 319 aa9.75□□□□□ -0.85
SNRNP48-201ENST00000342415 LGALS9BQ3B8N2 356 aa9.75□□□□□ -0.85
SNRNP48-201ENST00000342415 LGALS9CQ6DKI2 356 aa9.75□□□□□ -0.85
SNRNP48-201ENST00000342415 CSTL1Q9H114 145 aa9.75□□□□□ -0.85
SNRNP48-201ENST00000342415 PRAC2D3DTV9 90 aa9.75□□□□□ -0.85
SNRNP48-201ENST00000342415 H3BRM9 83 aa9.75□□□□□ -0.85
SNRNP48-201ENST00000342415 IGFL3Q6UXB1 125 aa9.75□□□□□ -0.85
SNRNP48-201ENST00000342415 SCRT2Q9NQ03 307 aa9.75□□□□□ -0.85
SNRNP48-201ENST00000342415 KLF12Q9Y4X4 402 aa9.75□□□□□ -0.85
SNRNP48-201ENST00000342415 ORMDL2Q53FV1 153 aa9.75□□□□□ -0.85
SNRNP48-201ENST00000342415 IGFL2Q6UWQ7 119 aa9.75□□□□□ -0.85
SNRNP48-201ENST00000342415 LINC00477Q96M19 166 aa9.75□□□□□ -0.85
SNRNP48-201ENST00000342415 CCL19Q99731 98 aa9.75□□□□□ -0.85
SNRNP48-201ENST00000342415 TEX22C9J3V5 150 aa9.74□□□□□ -0.85
SNRNP48-201ENST00000342415 PSMG4Q5JS54 123 aa9.74□□□□□ -0.85
SNRNP48-201ENST00000342415 Q71RC1 249 aaPredicted RBP9.74□□□□□ -0.85
SNRNP48-201ENST00000342415 SPATA12Q7Z6I5 190 aa9.74□□□□□ -0.85
SNRNP48-201ENST00000342415 IGHV4-39P01824 125 aa9.74□□□□□ -0.85
SNRNP48-201ENST00000342415 SYT8Q8NBV8 401 aa9.74□□□□□ -0.85
SNRNP48-201ENST00000342415 RAX2Q96IS3 184 aa9.74□□□□□ -0.85
SNRNP48-201ENST00000342415 NPFFR1Q9GZQ6 430 aa9.74□□□□□ -0.85
SNRNP48-201ENST00000342415 PKD1L2Q7Z442 2459 aa9.74□□□□□ -0.85
SNRNP48-201ENST00000342415 NPIPB6E9PJ23 425 aa9.74□□□□□ -0.85
SNRNP48-201ENST00000342415 H3BUX3 64 aa9.74□□□□□ -0.85
SNRNP48-201ENST00000342415 LINC01545Q5VT33 79 aa9.74□□□□□ -0.85
SNRNP48-201ENST00000342415 PIP4P1Q86T03 277 aa9.74□□□□□ -0.85
SNRNP48-201ENST00000342415 C11orf44Q8N8P7 122 aa9.74□□□□□ -0.85
SNRNP48-201ENST00000342415 PIMREGQ9BSJ6 248 aa9.74□□□□□ -0.85
SNRNP48-201ENST00000342415 AGPAT4-IT1Q9H0P7 198 aa9.74□□□□□ -0.85
SNRNP48-201ENST00000342415 FN1P02751 2386 aaKnown RBP9.74□□□□□ -0.85
SNRNP48-201ENST00000342415 A0A1B0GXF2 115 aa9.74□□□□□ -0.85
SNRNP48-201ENST00000342415 C19orf71A6NCJ1 209 aa9.74□□□□□ -0.85
SNRNP48-201ENST00000342415 DYNLRB2Q8TF09 96 aa9.74□□□□□ -0.85
SNRNP48-201ENST00000342415 KAAG1Q9UBP8 84 aa9.74□□□□□ -0.85
SNRNP48-201ENST00000342415 TET2Q6N021 2002 aaPredicted RBP9.73□□□□□ -0.85
SNRNP48-201ENST00000342415 A0A1W2PPM0 123 aa9.73□□□□□ -0.85
SNRNP48-201ENST00000342415 OVOL3O00110 214 aa9.73□□□□□ -0.85
SNRNP48-201ENST00000342415 C3orf36Q3SXR2 165 aa9.73□□□□□ -0.85
SNRNP48-201ENST00000342415 CFHR4Q92496 578 aa9.73□□□□□ -0.85
SNRNP48-201ENST00000342415 SNRPD3P62318 126 aaKnown RBP9.73□□□□□ -0.85
SNRNP48-201ENST00000342415 C8orf86Q6ZUL3 223 aa9.73□□□□□ -0.85
SNRNP48-201ENST00000342415 TSSC4Q9Y5U2 329 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms