RNA–Protein interactions for RNA: ENST00000342343.8

PDE8B-204, Transcript of phosphodiesterase 8B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE8B, Length 2,677 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8B-204ENST00000342343 MINOS1Q5TGZ0 78 aa12.17□□□□□ -0.46
PDE8B-204ENST00000342343 MAP1LC3AQ9H492 121 aa12.17□□□□□ -0.46
PDE8B-204ENST00000342343 MINOS1-NBL1R4GNA1 71 aa12.17□□□□□ -0.46
PDE8B-204ENST00000342343 IGKV2-40A0A087WW87 121 aaPredicted RBP12.17□□□□□ -0.46
PDE8B-204ENST00000342343 IGKV2D-40P01614 121 aaPredicted RBP12.17□□□□□ -0.46
PDE8B-204ENST00000342343 HLA-DMBP28068 263 aa12.17□□□□□ -0.46
PDE8B-204ENST00000342343 SAA4P35542 130 aa12.17□□□□□ -0.46
PDE8B-204ENST00000342343 LMO4P61968 165 aa12.17□□□□□ -0.46
PDE8B-204ENST00000342343 HIGD1BQ9P298 99 aa12.17□□□□□ -0.46
PDE8B-204ENST00000342343 HHLA3Q9XRX5 114 aa12.17□□□□□ -0.46
PDE8B-204ENST00000342343 EFNA4P52798 201 aa12.16□□□□□ -0.46
PDE8B-204ENST00000342343 RPL24P83731 157 aaKnown RBP12.16□□□□□ -0.46
PDE8B-204ENST00000342343 IGHV3OR16-10A0A075B7F0 116 aa12.16□□□□□ -0.46
PDE8B-204ENST00000342343 PRSS1P07477 247 aa12.16□□□□□ -0.46
PDE8B-204ENST00000342343 LEPP41159 167 aa12.16□□□□□ -0.46
PDE8B-204ENST00000342343 FXYD2P54710 66 aa12.16□□□□□ -0.46
PDE8B-204ENST00000342343 ZMAT4Q9H898 229 aa12.16□□□□□ -0.46
PDE8B-204ENST00000342343 SMAD5-AS1Q9Y6J3 95 aa12.16□□□□□ -0.46
PDE8B-204ENST00000342343 UTP20O75691 2785 aaKnown RBP12.16□□□□□ -0.46
PDE8B-204ENST00000342343 CRYBG3Q68DQ2 2970 aa12.16□□□□□ -0.46
PDE8B-204ENST00000342343 IGKV2D-26A0A0A0MRZ7 120 aa12.15□□□□□ -0.46
PDE8B-204ENST00000342343 G3V318 75 aa12.15□□□□□ -0.46
PDE8B-204ENST00000342343 FCER1GP30273 86 aa12.15□□□□□ -0.46
PDE8B-204ENST00000342343 ODF1Q14990 250 aa12.15□□□□□ -0.46
PDE8B-204ENST00000342343 OOSP1A8MZH6 123 aa12.15□□□□□ -0.46
PDE8B-204ENST00000342343 ATP6V0E1O15342 81 aa12.15□□□□□ -0.46
PDE8B-204ENST00000342343 IGLC6P0CF74 106 aa12.15□□□□□ -0.46
PDE8B-204ENST00000342343 ZNF80P51504 273 aaPredicted RBP12.14□□□□□ -0.47
PDE8B-204ENST00000342343 UBE2E1P51965 193 aa12.14□□□□□ -0.47
PDE8B-204ENST00000342343 RNF185Q96GF1 192 aa12.14□□□□□ -0.47
PDE8B-204ENST00000342343 ZNF48Q96MX3 618 aaPredicted RBP12.14□□□□□ -0.47
PDE8B-204ENST00000342343 MSRB1Q9NZV6 116 aa12.14□□□□□ -0.47
PDE8B-204ENST00000342343 LINC01546A6NGU7 62 aa12.14□□□□□ -0.47
PDE8B-204ENST00000342343 C15orf32Q32M92 178 aa12.14□□□□□ -0.47
PDE8B-204ENST00000342343 CHAC1Q9BUX1 264 aa12.14□□□□□ -0.47
PDE8B-204ENST00000342343 TTTY13Q9BZ97 58 aa12.14□□□□□ -0.47
PDE8B-204ENST00000342343 PRORYQ9H606 182 aa12.14□□□□□ -0.47
PDE8B-204ENST00000342343 NXT2Q9NPJ8 142 aaKnown RBP12.14□□□□□ -0.47
PDE8B-204ENST00000342343 IGKCP01834 107 aa12.14□□□□□ -0.47
PDE8B-204ENST00000342343 ORM1P02763 201 aa12.14□□□□□ -0.47
PDE8B-204ENST00000342343 RPL7P18124 248 aaKnown RBP12.14□□□□□ -0.47
PDE8B-204ENST00000342343 Q8TAT8 98 aa12.14□□□□□ -0.47
PDE8B-204ENST00000342343 VGLL1Q99990 258 aa12.14□□□□□ -0.47
PDE8B-204ENST00000342343 CSMD2Q7Z408 3487 aa12.13□□□□□ -0.47
PDE8B-204ENST00000342343 IGHV3-66A0A0C4DH42 116 aa12.13□□□□□ -0.47
PDE8B-204ENST00000342343 TRBV25-1A0A075B6N4 114 aa12.13□□□□□ -0.47
PDE8B-204ENST00000342343 IGHV3OR16-13A0A075B7E8 117 aa12.13□□□□□ -0.47
PDE8B-204ENST00000342343 IGHV3-74A0A0B4J1X5 117 aa12.13□□□□□ -0.47
PDE8B-204ENST00000342343 TEX48A0A1B0GUV7 120 aa12.13□□□□□ -0.47
PDE8B-204ENST00000342343 CIDEAO60543 219 aa12.13□□□□□ -0.47
PDE8B-204ENST00000342343 IGHG4P01861 327 aa12.13□□□□□ -0.47
PDE8B-204ENST00000342343 EVI2AP22794 236 aa12.13□□□□□ -0.47
PDE8B-204ENST00000342343 ZNF575Q86XF7 245 aa12.13□□□□□ -0.47
PDE8B-204ENST00000342343 USP9XQ93008 2570 aaPredicted RBP12.12□□□□□ -0.47
PDE8B-204ENST00000342343 TNFRSF6BO95407 300 aa12.12□□□□□ -0.47
PDE8B-204ENST00000342343 CLEC3BP05452 202 aa12.12□□□□□ -0.47
PDE8B-204ENST00000342343 LINC01559Q495D7 138 aa12.12□□□□□ -0.47
PDE8B-204ENST00000342343 TMEM219Q86XT9 240 aa12.12□□□□□ -0.47
PDE8B-204ENST00000342343 SMPXQ9UHP9 88 aa12.12□□□□□ -0.47
PDE8B-204ENST00000342343 GAS8-AS1O95177 125 aa12.12□□□□□ -0.47
PDE8B-204ENST00000342343 CNFNQ9BYD5 112 aa12.12□□□□□ -0.47
PDE8B-204ENST00000342343 K7ERJ3 54 aa12.11□□□□□ -0.47
PDE8B-204ENST00000342343 SRSF2Q01130 221 aaKnown RBP12.11□□□□□ -0.47
PDE8B-204ENST00000342343 GTSCR1Q86UQ5 136 aa12.11□□□□□ -0.47
PDE8B-204ENST00000342343 TM2D2Q9BX73 214 aa12.11□□□□□ -0.47
PDE8B-204ENST00000342343 LINC00527Q9UJ94 153 aa12.11□□□□□ -0.47
PDE8B-204ENST00000342343 CHTOPQ9Y3Y2 248 aaKnown RBP12.11□□□□□ -0.47
PDE8B-204ENST00000342343 FABP5P3A8MUU1 101 aa12.11□□□□□ -0.47
PDE8B-204ENST00000342343 IGHV4-39P01824 125 aa12.11□□□□□ -0.47
PDE8B-204ENST00000342343 ZC2HC1BQ5TFG8 222 aa12.11□□□□□ -0.47
PDE8B-204ENST00000342343 SAMD13Q5VXD3 122 aa12.11□□□□□ -0.47
PDE8B-204ENST00000342343 CEND1Q8N111 149 aa12.11□□□□□ -0.47
PDE8B-204ENST00000342343 PHLDA1Q8WV24 401 aaPredicted RBP12.11□□□□□ -0.47
PDE8B-204ENST00000342343 FOXC2Q99958 501 aa12.11□□□□□ -0.47
PDE8B-204ENST00000342343 NHP2Q9NX24 153 aaKnown RBP12.11□□□□□ -0.47
PDE8B-204ENST00000342343 IGSF10Q6WRI0 2623 aa12.11□□□□□ -0.47
PDE8B-204ENST00000342343 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.1□□□□□ -0.47
PDE8B-204ENST00000342343 CENPVL3A0A0U1RRI6 287 aa12.1□□□□□ -0.47
PDE8B-204ENST00000342343 ATP5LO75964 103 aa12.1□□□□□ -0.47
PDE8B-204ENST00000342343 DPM2O94777 84 aa12.1□□□□□ -0.47
PDE8B-204ENST00000342343 ZNF502Q8TBZ5 544 aa12.1□□□□□ -0.47
PDE8B-204ENST00000342343 IGHV3-49A0A0A0MS15 119 aa12.1□□□□□ -0.47
PDE8B-204ENST00000342343 TMEM8BA6NDV4 472 aa12.1□□□□□ -0.47
PDE8B-204ENST00000342343 CLEC19AQ6UXS0 136 aa12.1□□□□□ -0.47
PDE8B-204ENST00000342343 FAM110DQ8TAY7 271 aaPredicted RBP12.1□□□□□ -0.47
PDE8B-204ENST00000342343 TMEM158Q8WZ71 300 aa12.1□□□□□ -0.47
PDE8B-204ENST00000342343 NPFFO15130 113 aa12.09□□□□□ -0.47
PDE8B-204ENST00000342343 ZNF207O43670 478 aaKnown RBP12.09□□□□□ -0.47
PDE8B-204ENST00000342343 SRSF1Q07955 248 aaKnown RBP eCLIP12.09□□□□□ -0.47
PDE8B-204ENST00000342343 BRD3OSQ6XYD6 125 aa12.09□□□□□ -0.47
PDE8B-204ENST00000342343 RNF182Q8N6D2 247 aa12.09□□□□□ -0.47
PDE8B-204ENST00000342343 CCDC140Q96MF4 163 aa12.09□□□□□ -0.47
PDE8B-204ENST00000342343 TMEM160Q9NX00 188 aa12.09□□□□□ -0.47
PDE8B-204ENST00000342343 PRAC2D3DTV9 90 aa12.08□□□□□ -0.48
PDE8B-204ENST00000342343 ZFAND3Q9H8U3 227 aa12.08□□□□□ -0.48
PDE8B-204ENST00000342343 F8W1H4 67 aa12.08□□□□□ -0.48
PDE8B-204ENST00000342343 GATA1P15976 413 aaPredicted RBP12.08□□□□□ -0.48
PDE8B-204ENST00000342343 ERCC8Q13216 396 aa12.08□□□□□ -0.48
PDE8B-204ENST00000342343 SIGMAR1Q99720 223 aa12.08□□□□□ -0.48
PDE8B-204ENST00000342343 TRAV40A0A0B4J280 105 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms