RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 IGHV4-38-2P0DP08 117 aa11.48□□□□□ -0.57
PBX3-201ENST00000342287 FOXI1Q12951 378 aa11.48□□□□□ -0.57
PBX3-201ENST00000342287 FHL3Q13643 280 aa11.48□□□□□ -0.57
PBX3-201ENST00000342287 PCP2Q8IVA1 136 aa11.48□□□□□ -0.57
PBX3-201ENST00000342287 TEX29Q8N6K0 151 aa11.48□□□□□ -0.57
PBX3-201ENST00000342287 VPS13CQ709C8 3753 aa11.48□□□□□ -0.57
PBX3-201ENST00000342287 IGKV1OR2-108A0A075B7D4 117 aa11.48□□□□□ -0.57
PBX3-201ENST00000342287 RNF223E7ERA6 249 aa11.48□□□□□ -0.57
PBX3-201ENST00000342287 PLXNB1O43157 2135 aa11.47□□□□□ -0.57
PBX3-201ENST00000342287 TRBV20-1A0A075B6N2 111 aa11.47□□□□□ -0.57
PBX3-201ENST00000342287 FABP5P3A8MUU1 101 aa11.47□□□□□ -0.57
PBX3-201ENST00000342287 PRR20EP86478 221 aa11.47□□□□□ -0.57
PBX3-201ENST00000342287 PRR20CP86479 221 aa11.47□□□□□ -0.57
PBX3-201ENST00000342287 PRR20DP86480 221 aa11.47□□□□□ -0.57
PBX3-201ENST00000342287 PRR20BP86481 221 aa11.47□□□□□ -0.57
PBX3-201ENST00000342287 PRR20AP86496 221 aa11.47□□□□□ -0.57
PBX3-201ENST00000342287 Q8N9W7 124 aa11.47□□□□□ -0.57
PBX3-201ENST00000342287 RASL11BQ9BPW5 248 aa11.47□□□□□ -0.57
PBX3-201ENST00000342287 PTPN13Q12923 2485 aa11.47□□□□□ -0.57
PBX3-201ENST00000342287 TENM4Q6N022 2769 aa11.47□□□□□ -0.57
PBX3-201ENST00000342287 HIGD1CA8MV81 97 aa11.47□□□□□ -0.57
PBX3-201ENST00000342287 IGLV2-8P01709 118 aa11.47□□□□□ -0.57
PBX3-201ENST00000342287 Q6AWC8 147 aa11.47□□□□□ -0.57
PBX3-201ENST00000342287 PRELID3AQ96N28 172 aa11.47□□□□□ -0.57
PBX3-201ENST00000342287 SIGLEC8Q9NYZ4 499 aa11.47□□□□□ -0.57
PBX3-201ENST00000342287 NPIPB3Q92617 1050 aa11.46□□□□□ -0.57
PBX3-201ENST00000342287 SLC25A33Q9BSK2 321 aa11.46□□□□□ -0.57
PBX3-201ENST00000342287 TMUB1Q9BVT8 246 aa11.46□□□□□ -0.57
PBX3-201ENST00000342287 ANKRD17O75179 2603 aaKnown RBP11.46□□□□□ -0.57
PBX3-201ENST00000342287 CENPEQ02224 2701 aa11.46□□□□□ -0.57
PBX3-201ENST00000342287 A8MWL6 223 aa11.46□□□□□ -0.58
PBX3-201ENST00000342287 J3QLI3 93 aa11.46□□□□□ -0.58
PBX3-201ENST00000342287 TGFAP01135 160 aa11.46□□□□□ -0.58
PBX3-201ENST00000342287 C5orf47Q569G3 176 aa11.46□□□□□ -0.58
PBX3-201ENST00000342287 AVPP01185 164 aa11.45□□□□□ -0.58
PBX3-201ENST00000342287 IGHV3-48P01763 117 aa11.45□□□□□ -0.58
PBX3-201ENST00000342287 HIST2H2BCQ6DN03 193 aa11.45□□□□□ -0.58
PBX3-201ENST00000342287 MAPK1IP1LQ8NDC0 245 aa11.45□□□□□ -0.58
PBX3-201ENST00000342287 OR8A1Q8NGG7 326 aa11.45□□□□□ -0.58
PBX3-201ENST00000342287 ZNF502Q8TBZ5 544 aa11.45□□□□□ -0.58
PBX3-201ENST00000342287 POLQO75417 2590 aa11.45□□□□□ -0.58
PBX3-201ENST00000342287 IGHV7-81A0A0B4J1V7 117 aa11.45□□□□□ -0.58
PBX3-201ENST00000342287 KLF17Q5JT82 389 aaPredicted RBP11.45□□□□□ -0.58
PBX3-201ENST00000342287 THAP8Q8NA92 274 aa11.45□□□□□ -0.58
PBX3-201ENST00000342287 CSMD2Q7Z408 3487 aa11.44□□□□□ -0.58
PBX3-201ENST00000342287 CT45A10P0DMU9 189 aa11.44□□□□□ -0.58
PBX3-201ENST00000342287 PIFOQ8TCI5 191 aa11.44□□□□□ -0.58
PBX3-201ENST00000342287 Q96MF0 132 aa11.44□□□□□ -0.58
PBX3-201ENST00000342287 TRAV5A0A0B4J249 113 aa11.44□□□□□ -0.58
PBX3-201ENST00000342287 E9PLD3 99 aa11.44□□□□□ -0.58
PBX3-201ENST00000342287 NDPQ00604 133 aa11.44□□□□□ -0.58
PBX3-201ENST00000342287 LINC00479Q96M42 142 aa11.44□□□□□ -0.58
PBX3-201ENST00000342287 VCX2Q9H322 139 aa11.44□□□□□ -0.58
PBX3-201ENST00000342287 MRPL36Q9P0J6 103 aaKnown RBP11.44□□□□□ -0.58
PBX3-201ENST00000342287 NAV3Q8IVL0 2385 aa11.44□□□□□ -0.58
PBX3-201ENST00000342287 TCRBV4S1A1TA0A5B7 111 aa11.43□□□□□ -0.58
PBX3-201ENST00000342287 IGHV4-31P0DP07 118 aa11.43□□□□□ -0.58
PBX3-201ENST00000342287 ZNF747Q9BV97 191 aa11.43□□□□□ -0.58
PBX3-201ENST00000342287 IGLL5B9A064 214 aa11.43□□□□□ -0.58
PBX3-201ENST00000342287 I3L2K1 104 aa11.43□□□□□ -0.58
PBX3-201ENST00000342287 SVEP1Q4LDE5 3571 aa11.42□□□□□ -0.58
PBX3-201ENST00000342287 NAV2Q8IVL1 2488 aa11.42□□□□□ -0.58
PBX3-201ENST00000342287 IGKV1D-37A0A075B6S9 117 aa11.42□□□□□ -0.58
PBX3-201ENST00000342287 IGHV3-21A0A0B4J1V1 117 aa11.42□□□□□ -0.58
PBX3-201ENST00000342287 EGR2P11161 476 aaPredicted RBP11.42□□□□□ -0.58
PBX3-201ENST00000342287 CSN1S1P47710 185 aa11.42□□□□□ -0.58
PBX3-201ENST00000342287 PHLDA1Q8WV24 401 aaPredicted RBP11.42□□□□□ -0.58
PBX3-201ENST00000342287 KIR2DL4Q99706 377 aa11.42□□□□□ -0.58
PBX3-201ENST00000342287 PRO0461Q9UI25 63 aa11.42□□□□□ -0.58
PBX3-201ENST00000342287 CSDC2Q9Y534 153 aaKnown RBP11.42□□□□□ -0.58
PBX3-201ENST00000342287 DOPEY2Q9Y3R5 2298 aa11.42□□□□□ -0.58
PBX3-201ENST00000342287 NFE4Q86UQ8 179 aa11.42□□□□□ -0.58
PBX3-201ENST00000342287 KRTAP1-3Q8IUG1 177 aa11.42□□□□□ -0.58
PBX3-201ENST00000342287 C5orf56Q8N8D9 126 aa11.42□□□□□ -0.58
PBX3-201ENST00000342287 MOB4Q9Y3A3 225 aa11.42□□□□□ -0.58
PBX3-201ENST00000342287 ABCA12Q86UK0 2595 aa11.41□□□□□ -0.58
PBX3-201ENST00000342287 MIR17HGQ75NE6 70 aa11.41□□□□□ -0.58
PBX3-201ENST00000342287 TMEM219Q86XT9 240 aa11.41□□□□□ -0.58
PBX3-201ENST00000342287 TRGV9Q99603 122 aa11.41□□□□□ -0.58
PBX3-201ENST00000342287 SOX21Q9Y651 276 aaPredicted RBP11.41□□□□□ -0.58
PBX3-201ENST00000342287 MAP1AP78559 2803 aaPredicted RBP11.41□□□□□ -0.58
PBX3-201ENST00000342287 HBBP68871 147 aa11.41□□□□□ -0.58
PBX3-201ENST00000342287 PTH2Q96A98 100 aa11.4□□□□□ -0.58
PBX3-201ENST00000342287 TTTY13Q9BZ97 58 aa11.4□□□□□ -0.58
PBX3-201ENST00000342287 TRAV25A0A0B4J276 109 aa11.4□□□□□ -0.58
PBX3-201ENST00000342287 K7EIM0 57 aa11.4□□□□□ -0.58
PBX3-201ENST00000342287 IGF2BP2-AS1Q96M15 143 aa11.4□□□□□ -0.58
PBX3-201ENST00000342287 IGLV11-55A0A075B6I3 123 aa11.39□□□□□ -0.59
PBX3-201ENST00000342287 GGTLC3B5MD39 225 aa11.39□□□□□ -0.59
PBX3-201ENST00000342287 CACNG7P62955 275 aa11.39□□□□□ -0.59
PBX3-201ENST00000342287 FANCD2OSQ96PS1 177 aa11.39□□□□□ -0.59
PBX3-201ENST00000342287 APCP25054 2843 aa11.39□□□□□ -0.59
PBX3-201ENST00000342287 H3BUX3 64 aa11.39□□□□□ -0.59
PBX3-201ENST00000342287 NDUFV3P56181 108 aaKnown RBP11.39□□□□□ -0.59
PBX3-201ENST00000342287 OR1L4Q8NGR5 311 aa11.39□□□□□ -0.59
PBX3-201ENST00000342287 DAZAP1Q96EP5 407 aaKnown RBP11.39□□□□□ -0.59
PBX3-201ENST00000342287 AP5S1Q9NUS5 200 aa11.39□□□□□ -0.59
PBX3-201ENST00000342287 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.39□□□□□ -0.591e-5■■■■□ 21.5
PBX3-201ENST00000342287 A0A1B0GXF2 115 aa11.39□□□□□ -0.59
PBX3-201ENST00000342287 ATP6V0E1O15342 81 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms