RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 UPK2O00526 184 aa11.83□□□□□ -0.52
BRAT1-201ENST00000340611 MSMBP08118 114 aa11.83□□□□□ -0.52
BRAT1-201ENST00000340611 GAGE13Q4V321 117 aa11.83□□□□□ -0.52
BRAT1-201ENST00000340611 ZNF329Q86UD4 541 aa11.83□□□□□ -0.52
BRAT1-201ENST00000340611 PDPNQ86YL7 162 aa11.83□□□□□ -0.52
BRAT1-201ENST00000340611 PRNDQ9UKY0 176 aa11.83□□□□□ -0.52
BRAT1-201ENST00000340611 CUBNO60494 3623 aa11.82□□□□□ -0.52
BRAT1-201ENST00000340611 APOHP02749 345 aaPredicted RBP11.82□□□□□ -0.52
BRAT1-201ENST00000340611 RNASE2P10153 161 aaKnown RBP11.82□□□□□ -0.52
BRAT1-201ENST00000340611 HBBP68871 147 aa11.82□□□□□ -0.52
BRAT1-201ENST00000340611 FAM162BQ5T6X4 162 aa11.82□□□□□ -0.52
BRAT1-201ENST00000340611 WFDC11Q8NEX6 87 aa11.82□□□□□ -0.52
BRAT1-201ENST00000340611 GTSF1Q8WW33 167 aa11.82□□□□□ -0.52
BRAT1-201ENST00000340611 AJUBAQ96IF1 538 aa11.82□□□□□ -0.52
BRAT1-201ENST00000340611 PAXXQ9BUH6 204 aa11.82□□□□□ -0.52
BRAT1-201ENST00000340611 A0A096LNT2 108 aa11.82□□□□□ -0.52
BRAT1-201ENST00000340611 COX7A2P2O60397 106 aa11.82□□□□□ -0.52
BRAT1-201ENST00000340611 CACNG7P62955 275 aa11.82□□□□□ -0.52
BRAT1-201ENST00000340611 CIARTQ8N365 385 aaPredicted RBP11.82□□□□□ -0.52
BRAT1-201ENST00000340611 PRSS29PA6NIE9 313 aa11.81□□□□□ -0.52
BRAT1-201ENST00000340611 FAM106CPP0CH98 169 aa11.81□□□□□ -0.52
BRAT1-201ENST00000340611 MRGPRG-AS1Q2M3A8 158 aa11.81□□□□□ -0.52
BRAT1-201ENST00000340611 FAM106AQ4KMX7 169 aa11.81□□□□□ -0.52
BRAT1-201ENST00000340611 CFHR4Q92496 578 aa11.81□□□□□ -0.52
BRAT1-201ENST00000340611 TRBV20-1A0A075B6N2 111 aa11.81□□□□□ -0.52
BRAT1-201ENST00000340611 LOC389332A0A1B0GUA5 103 aa11.81□□□□□ -0.52
BRAT1-201ENST00000340611 FNDC10F2Z333 226 aa11.81□□□□□ -0.52
BRAT1-201ENST00000340611 H3BTX0 84 aa11.81□□□□□ -0.52
BRAT1-201ENST00000340611 J3KRW8 73 aa11.81□□□□□ -0.52
BRAT1-201ENST00000340611 TGFAP01135 160 aa11.81□□□□□ -0.52
BRAT1-201ENST00000340611 PAX8Q06710 450 aa11.81□□□□□ -0.52
BRAT1-201ENST00000340611 CD69Q07108 199 aa11.81□□□□□ -0.52
BRAT1-201ENST00000340611 FHL3Q13643 280 aa11.81□□□□□ -0.52
BRAT1-201ENST00000340611 RASL11AQ6T310 242 aa11.81□□□□□ -0.52
BRAT1-201ENST00000340611 KRTAP1-3Q8IUG1 177 aa11.81□□□□□ -0.52
BRAT1-201ENST00000340611 ZNF747Q9BV97 191 aa11.81□□□□□ -0.52
BRAT1-201ENST00000340611 MTORP42345 2549 aa11.81□□□□□ -0.52
BRAT1-201ENST00000340611 LTAP01374 205 aa11.8□□□□□ -0.52
BRAT1-201ENST00000340611 LINC00322Q6ZN03 302 aaPredicted RBP11.8□□□□□ -0.52
BRAT1-201ENST00000340611 Q6ZUT4 128 aa11.8□□□□□ -0.52
BRAT1-201ENST00000340611 FAM231DQ6ZW35 169 aa11.8□□□□□ -0.52
BRAT1-201ENST00000340611 OR4X2Q8NGF9 303 aa11.8□□□□□ -0.52
BRAT1-201ENST00000340611 NPIPB5A8MRT5 1133 aa11.8□□□□□ -0.52
BRAT1-201ENST00000340611 SFTA2Q6UW10 78 aa11.8□□□□□ -0.52
BRAT1-201ENST00000340611 AGRNO00468 2067 aa11.8□□□□□ -0.52
BRAT1-201ENST00000340611 CGB1A6NKQ9 187 aa11.8□□□□□ -0.52
BRAT1-201ENST00000340611 POU2AF1Q16633 256 aa11.8□□□□□ -0.52
BRAT1-201ENST00000340611 C2orf83Q53S99 150 aa11.8□□□□□ -0.52
BRAT1-201ENST00000340611 PATE2Q6UY27 113 aa11.8□□□□□ -0.52
BRAT1-201ENST00000340611 TM2D2Q9BX73 214 aa11.8□□□□□ -0.52
BRAT1-201ENST00000340611 SLC25A5P05141 298 aaKnown RBP11.79□□□□□ -0.52
BRAT1-201ENST00000340611 UBE2E1P51965 193 aa11.79□□□□□ -0.52
BRAT1-201ENST00000340611 PLGLAQ15195 96 aa11.79□□□□□ -0.52
BRAT1-201ENST00000340611 C10orf113Q5VZT2 155 aa11.79□□□□□ -0.52
BRAT1-201ENST00000340611 TTC9CQ8N5M4 171 aa11.79□□□□□ -0.52
BRAT1-201ENST00000340611 OR9G4Q8NGQ1 327 aa11.79□□□□□ -0.52
BRAT1-201ENST00000340611 NPIPB3Q92617 1050 aa11.79□□□□□ -0.52
BRAT1-201ENST00000340611 NF1P21359 2839 aa11.79□□□□□ -0.52
BRAT1-201ENST00000340611 A0A1B0GXF2 115 aa11.79□□□□□ -0.52
BRAT1-201ENST00000340611 NPFFO15130 113 aa11.79□□□□□ -0.52
BRAT1-201ENST00000340611 MRPL32Q9BYC8 188 aaKnown RBP11.79□□□□□ -0.52
BRAT1-201ENST00000340611 AP5S1Q9NUS5 200 aa11.79□□□□□ -0.52
BRAT1-201ENST00000340611 NCBP2LA6PVI3 153 aaKnown RBP11.78□□□□□ -0.52
BRAT1-201ENST00000340611 PRB4P10163 310 aaPredicted RBP11.78□□□□□ -0.52
BRAT1-201ENST00000340611 PRSS3P2Q8NHM4 247 aa11.78□□□□□ -0.52
BRAT1-201ENST00000340611 B4DSR2 109 aa11.78□□□□□ -0.52
BRAT1-201ENST00000340611 CCDC179H3BU77 68 aa11.78□□□□□ -0.52
BRAT1-201ENST00000340611 SLC25A16P16260 332 aa11.78□□□□□ -0.52
BRAT1-201ENST00000340611 LOXL1Q08397 574 aaPredicted RBP11.78□□□□□ -0.52
BRAT1-201ENST00000340611 TMEM219Q86XT9 240 aa11.78□□□□□ -0.52
BRAT1-201ENST00000340611 PRELID3AQ96N28 172 aa11.78□□□□□ -0.52
BRAT1-201ENST00000340611 MRPL36Q9P0J6 103 aaKnown RBP11.78□□□□□ -0.52
BRAT1-201ENST00000340611 TNFRSF18Q9Y5U5 241 aa11.78□□□□□ -0.52
BRAT1-201ENST00000340611 FCER1GP30273 86 aa11.77□□□□□ -0.52
BRAT1-201ENST00000340611 CSN1S1P47710 185 aa11.77□□□□□ -0.52
BRAT1-201ENST00000340611 VMA21Q3ZAQ7 101 aa11.77□□□□□ -0.52
BRAT1-201ENST00000340611 FXYD5Q96DB9 178 aa11.77□□□□□ -0.52
BRAT1-201ENST00000340611 SIGLEC9Q9Y336 463 aa11.77□□□□□ -0.52
BRAT1-201ENST00000340611 PGPA6NDG6 321 aa11.77□□□□□ -0.53
BRAT1-201ENST00000340611 MOSP00540 346 aa11.77□□□□□ -0.53
BRAT1-201ENST00000340611 ORM2P19652 201 aa11.77□□□□□ -0.53
BRAT1-201ENST00000340611 DSCR9P59020 149 aa11.77□□□□□ -0.53
BRAT1-201ENST00000340611 KLF17Q5JT82 389 aaPredicted RBP11.77□□□□□ -0.53
BRAT1-201ENST00000340611 C3orf56Q8N813 242 aa11.77□□□□□ -0.53
BRAT1-201ENST00000340611 PTH2Q96A98 100 aa11.77□□□□□ -0.53
BRAT1-201ENST00000340611 IGLL5B9A064 214 aa11.76□□□□□ -0.53
BRAT1-201ENST00000340611 WT1-ASQ06250 92 aa11.76□□□□□ -0.53
BRAT1-201ENST00000340611 FOXI1Q12951 378 aa11.76□□□□□ -0.53
BRAT1-201ENST00000340611 OR1L8Q8NGR8 309 aa11.76□□□□□ -0.53
BRAT1-201ENST00000340611 TMEM167AQ8TBQ9 72 aa11.76□□□□□ -0.53
BRAT1-201ENST00000340611 BEX4Q9NWD9 120 aaPredicted RBP11.76□□□□□ -0.53
BRAT1-201ENST00000340611 LINC00305Q7Z4B0 112 aa11.76□□□□□ -0.53
BRAT1-201ENST00000340611 KIR2DL4Q99706 377 aa11.76□□□□□ -0.53
BRAT1-201ENST00000340611 EPDR1Q9UM22 224 aa11.76□□□□□ -0.53
BRAT1-201ENST00000340611 OTOGQ6ZRI0 2925 aa11.76□□□□□ -0.53
BRAT1-201ENST00000340611 IGHV3-21A0A0B4J1V1 117 aa11.76□□□□□ -0.53
BRAT1-201ENST00000340611 PPP1R27Q86WC6 154 aa11.76□□□□□ -0.53
BRAT1-201ENST00000340611 RPP21Q9H633 154 aaKnown RBP11.76□□□□□ -0.53
BRAT1-201ENST00000340611 YAE1D1Q9NRH1 226 aa11.76□□□□□ -0.53
BRAT1-201ENST00000340611 IGHV1-69DA0A0B4J2H0 117 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms