RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 EEF1AKMT3Q96AZ1 226 aa12.55□□□□□ -0.4
LITAF-201ENST00000339430 PRELID3AQ96N28 172 aa12.55□□□□□ -0.4
LITAF-201ENST00000339430 TMEM191AQ9H0A3 160 aa12.55□□□□□ -0.4
LITAF-201ENST00000339430 DLEU1O43261 78 aa12.55□□□□□ -0.4
LITAF-201ENST00000339430 NPSP0C0P6 89 aa12.55□□□□□ -0.4
LITAF-201ENST00000339430 BMI1P35226 326 aa12.55□□□□□ -0.4
LITAF-201ENST00000339430 IL17RELQ6ZVW7 336 aa12.55□□□□□ -0.4
LITAF-201ENST00000339430 ZNF575Q86XF7 245 aa12.55□□□□□ -0.4
LITAF-201ENST00000339430 SIGLEC8Q9NYZ4 499 aa12.55□□□□□ -0.4
LITAF-201ENST00000339430 S100A7P31151 101 aa12.54□□□□□ -0.4
LITAF-201ENST00000339430 MSRB1Q9NZV6 116 aa12.54□□□□□ -0.4
LITAF-201ENST00000339430 NCR2O95944 276 aa12.54□□□□□ -0.4
LITAF-201ENST00000339430 PPIFP30405 207 aaKnown RBP12.54□□□□□ -0.4
LITAF-201ENST00000339430 PET117Q6UWS5 81 aa12.54□□□□□ -0.4
LITAF-201ENST00000339430 ORMDL3Q8N138 153 aa12.54□□□□□ -0.4
LITAF-201ENST00000339430 ARL6IP6Q8N6S5 226 aa12.54□□□□□ -0.4
LITAF-201ENST00000339430 MRPS16Q9Y3D3 137 aaKnown RBP12.54□□□□□ -0.4
LITAF-201ENST00000339430 Q6ZVH6 145 aa12.53□□□□□ -0.4
LITAF-201ENST00000339430 OR10AG1Q8NH19 301 aa12.53□□□□□ -0.4
LITAF-201ENST00000339430 TEX15Q9BXT5 2789 aa12.53□□□□□ -0.4
LITAF-201ENST00000339430 FBLL1A6NHQ2 334 aaKnown RBP12.52□□□□□ -0.4
LITAF-201ENST00000339430 IGLC6P0CF74 106 aa12.52□□□□□ -0.4
LITAF-201ENST00000339430 ZNF124Q15973 351 aa12.52□□□□□ -0.4
LITAF-201ENST00000339430 ZNF747Q9BV97 191 aa12.52□□□□□ -0.4
LITAF-201ENST00000339430 ZNF469Q96JG9 3925 aaPredicted RBP12.52□□□□□ -0.41
LITAF-201ENST00000339430 A0A087X0K7 114 aa12.52□□□□□ -0.41
LITAF-201ENST00000339430 A0A096LNJ9 63 aa12.52□□□□□ -0.41
LITAF-201ENST00000339430 FABP5P3A8MUU1 101 aa12.52□□□□□ -0.41
LITAF-201ENST00000339430 OR8A1Q8NGG7 326 aa12.52□□□□□ -0.41
LITAF-201ENST00000339430 METTL26Q96S19 204 aa12.52□□□□□ -0.41
LITAF-201ENST00000339430 FOXC2Q99958 501 aa12.52□□□□□ -0.41
LITAF-201ENST00000339430 ST20Q9HBF5 79 aa12.52□□□□□ -0.41
LITAF-201ENST00000339430 U3KQK5 164 aa12.52□□□□□ -0.41
LITAF-201ENST00000339430 CSPG4Q6UVK1 2322 aa12.52□□□□□ -0.41
LITAF-201ENST00000339430 HSBP1L1C9JCN9 74 aa12.51□□□□□ -0.41
LITAF-201ENST00000339430 CKS2P33552 79 aa12.51□□□□□ -0.41
LITAF-201ENST00000339430 RPS20P60866 119 aaKnown RBP12.51□□□□□ -0.41
LITAF-201ENST00000339430 ATP5G2Q06055 141 aa12.51□□□□□ -0.41
LITAF-201ENST00000339430 FLNAP21333 2647 aaKnown RBP12.51□□□□□ -0.41
LITAF-201ENST00000339430 TRBV7-1A0A0A6YYK4 115 aa12.51□□□□□ -0.41
LITAF-201ENST00000339430 TRAV41A0A0B4J266 112 aa12.51□□□□□ -0.41
LITAF-201ENST00000339430 NPYP01303 97 aa12.51□□□□□ -0.41
LITAF-201ENST00000339430 RAB9AP51151 201 aa12.51□□□□□ -0.41
LITAF-201ENST00000339430 KLK9Q2XQG4 91 aa12.51□□□□□ -0.41
LITAF-201ENST00000339430 CYB5R2Q6BCY4 276 aa12.51□□□□□ -0.41
LITAF-201ENST00000339430 KLK9Q9UKQ9 250 aa12.51□□□□□ -0.41
LITAF-201ENST00000339430 MOB4Q9Y3A3 225 aa12.51□□□□□ -0.41
LITAF-201ENST00000339430 GOLT1BQ9Y3E0 138 aa12.51□□□□□ -0.41
LITAF-201ENST00000339430 TRAV8-2A0A0B4J237 113 aa12.5□□□□□ -0.41
LITAF-201ENST00000339430 J3QLI3 93 aa12.5□□□□□ -0.41
LITAF-201ENST00000339430 SMAD7O15105 426 aaKnown RBP12.5□□□□□ -0.41
LITAF-201ENST00000339430 LY6EQ16553 131 aa12.5□□□□□ -0.41
LITAF-201ENST00000339430 PIFOQ8TCI5 191 aa12.5□□□□□ -0.41
LITAF-201ENST00000339430 SLC50A1Q9BRV3 221 aa12.5□□□□□ -0.41
LITAF-201ENST00000339430 AGPAT4-IT1Q9H0P7 198 aa12.5□□□□□ -0.41
LITAF-201ENST00000339430 NOTCH2Q04721 2471 aa12.5□□□□□ -0.41
LITAF-201ENST00000339430 LINC01545Q5VT33 79 aa12.5□□□□□ -0.41
LITAF-201ENST00000339430 DMRTA1Q5VZB9 504 aa12.5□□□□□ -0.41
LITAF-201ENST00000339430 C8orf86Q6ZUL3 223 aa12.5□□□□□ -0.41
LITAF-201ENST00000339430 GAS8-AS1O95177 125 aa12.49□□□□□ -0.41
LITAF-201ENST00000339430 TRGV3P03979 118 aa12.49□□□□□ -0.41
LITAF-201ENST00000339430 Q6ZQT7 251 aa12.48□□□□□ -0.41
LITAF-201ENST00000339430 C11orf21Q9P2W6 132 aa12.48□□□□□ -0.41
LITAF-201ENST00000339430 TRBV12-3P01733 135 aa12.48□□□□□ -0.41
LITAF-201ENST00000339430 SLC25A34Q6PIV7 304 aa12.48□□□□□ -0.41
LITAF-201ENST00000339430 SCRT2Q9NQ03 307 aa12.48□□□□□ -0.41
LITAF-201ENST00000339430 TLN2Q9Y4G6 2542 aa12.47□□□□□ -0.41
LITAF-201ENST00000339430 IGKV3D-20A0A0C4DH25 116 aa12.47□□□□□ -0.41
LITAF-201ENST00000339430 RBAKDNA6NC62 111 aa12.47□□□□□ -0.41
LITAF-201ENST00000339430 GAGE1Q13065 139 aa12.47□□□□□ -0.41
LITAF-201ENST00000339430 MPV17L2Q567V2 206 aa12.47□□□□□ -0.41
LITAF-201ENST00000339430 TMEM78Q5T7P6 136 aa12.47□□□□□ -0.41
LITAF-201ENST00000339430 RNF185Q96GF1 192 aa12.47□□□□□ -0.41
LITAF-201ENST00000339430 TCTAP57738 103 aa12.47□□□□□ -0.41
LITAF-201ENST00000339430 LINC01559Q495D7 138 aa12.47□□□□□ -0.41
LITAF-201ENST00000339430 WFDC3Q8IUB2 231 aa12.47□□□□□ -0.41
LITAF-201ENST00000339430 EVI2AP22794 236 aa12.46□□□□□ -0.41
LITAF-201ENST00000339430 ARL3P36405 182 aa12.46□□□□□ -0.41
LITAF-201ENST00000339430 SRSF2Q01130 221 aaKnown RBP12.46□□□□□ -0.41
LITAF-201ENST00000339430 C16orf92Q96LL3 132 aa12.46□□□□□ -0.41
LITAF-201ENST00000339430 MEGF9Q9H1U4 602 aa12.46□□□□□ -0.41
LITAF-201ENST00000339430 SNAI2O43623 268 aa12.45□□□□□ -0.42
LITAF-201ENST00000339430 C19orf54Q5BKX5 351 aa12.45□□□□□ -0.42
LITAF-201ENST00000339430 UNQ9165/PRO28630Q6UXU0 137 aa12.45□□□□□ -0.42
LITAF-201ENST00000339430 MYO9AB2RTY4 2548 aa12.45□□□□□ -0.42
LITAF-201ENST00000339430 J3KRW8 73 aa12.45□□□□□ -0.42
LITAF-201ENST00000339430 IGHV3-11P01762 117 aa12.45□□□□□ -0.42
LITAF-201ENST00000339430 GATA1P15976 413 aaPredicted RBP12.45□□□□□ -0.42
LITAF-201ENST00000339430 FOXE3Q13461 319 aa12.45□□□□□ -0.42
LITAF-201ENST00000339430 U3KQE9 123 aa12.45□□□□□ -0.42
LITAF-201ENST00000339430 HBDP02042 147 aa12.44□□□□□ -0.42
LITAF-201ENST00000339430 SELENOKQ9Y6D0 94 aa12.44□□□□□ -0.42
LITAF-201ENST00000339430 FAM223BA6NKX1 122 aa12.44□□□□□ -0.42
LITAF-201ENST00000339430 H3BUX3 64 aa12.44□□□□□ -0.42
LITAF-201ENST00000339430 NUDT3O95989 172 aa12.44□□□□□ -0.42
LITAF-201ENST00000339430 CACNG7P62955 275 aa12.44□□□□□ -0.42
LITAF-201ENST00000339430 LCNL1Q6ZST4 164 aa12.44□□□□□ -0.42
LITAF-201ENST00000339430 FAM223AQ8IWN6 122 aa12.44□□□□□ -0.42
LITAF-201ENST00000339430 CNFNQ9BYD5 112 aa12.44□□□□□ -0.42
LITAF-201ENST00000339430 ACANP16112 2415 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms