RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 FOXE3Q13461 319 aa5.6□□□□□ -1.51
SRFBP1-201ENST00000339397 CT83Q5H943 113 aa5.6□□□□□ -1.51
SRFBP1-201ENST00000339397 WDR73Q6P4I2 378 aa5.6□□□□□ -1.51
SRFBP1-201ENST00000339397 LYZL1Q6UWQ5 148 aa5.6□□□□□ -1.51
SRFBP1-201ENST00000339397 MSRB1Q9NZV6 116 aa5.6□□□□□ -1.51
SRFBP1-201ENST00000339397 SMPXQ9UHP9 88 aa5.6□□□□□ -1.51
SRFBP1-201ENST00000339397 ZNF580Q9UK33 172 aa5.6□□□□□ -1.51
SRFBP1-201ENST00000339397 ORM1P02763 201 aa5.59□□□□□ -1.51
SRFBP1-201ENST00000339397 HBBP68871 147 aa5.59□□□□□ -1.51
SRFBP1-201ENST00000339397 KLHDC1Q8N7A1 406 aa5.59□□□□□ -1.51
SRFBP1-201ENST00000339397 ATP6V0BQ99437 205 aa5.59□□□□□ -1.51
SRFBP1-201ENST00000339397 SLC50A1Q9BRV3 221 aa5.59□□□□□ -1.51
SRFBP1-201ENST00000339397 YAE1D1Q9NRH1 226 aa5.59□□□□□ -1.51
SRFBP1-201ENST00000339397 TENM1Q9UKZ4 2725 aa5.59□□□□□ -1.51
SRFBP1-201ENST00000339397 TMEM189A5PLL7 270 aa5.59□□□□□ -1.51
SRFBP1-201ENST00000339397 DNAJC9-AS1A6NH13 148 aa5.59□□□□□ -1.51
SRFBP1-201ENST00000339397 HOXD3P31249 432 aaPredicted RBP5.59□□□□□ -1.51
SRFBP1-201ENST00000339397 ZNF138P52744 262 aa5.59□□□□□ -1.51
SRFBP1-201ENST00000339397 SRSF2Q01130 221 aaKnown RBP5.59□□□□□ -1.51
SRFBP1-201ENST00000339397 SAPCD1Q5SSQ6 148 aa5.59□□□□□ -1.51
SRFBP1-201ENST00000339397 ZNF738Q8NE65 137 aa5.59□□□□□ -1.51
SRFBP1-201ENST00000339397 C18orf32Q8TCD1 76 aa5.59□□□□□ -1.51
SRFBP1-201ENST00000339397 IGKV3D-20A0A0C4DH25 116 aa5.58□□□□□ -1.52
SRFBP1-201ENST00000339397 MT-ND6P03923 174 aa5.58□□□□□ -1.52
SRFBP1-201ENST00000339397 FOSL1P15407 271 aa5.58□□□□□ -1.52
SRFBP1-201ENST00000339397 SLURP1P55000 103 aa5.58□□□□□ -1.52
SRFBP1-201ENST00000339397 FAM106AQ4KMX7 169 aa5.58□□□□□ -1.52
SRFBP1-201ENST00000339397 ADAMTSL5Q6ZMM2 481 aa5.58□□□□□ -1.52
SRFBP1-201ENST00000339397 Q6ZSV7 163 aa5.58□□□□□ -1.52
SRFBP1-201ENST00000339397 ALKBH7Q9BT30 221 aaPredicted RBP5.58□□□□□ -1.52
SRFBP1-201ENST00000339397 GFRA4Q9GZZ7 299 aa5.58□□□□□ -1.52
SRFBP1-201ENST00000339397 NRN1Q9NPD7 142 aa5.58□□□□□ -1.52
SRFBP1-201ENST00000339397 NSD1Q96L73 2696 aaPredicted RBP5.58□□□□□ -1.52
SRFBP1-201ENST00000339397 TRRAPQ9Y4A5 3859 aa5.58□□□□□ -1.52
SRFBP1-201ENST00000339397 A0A1B0GUT8 65 aa5.58□□□□□ -1.52
SRFBP1-201ENST00000339397 A0A1W2PS18 150 aa5.58□□□□□ -1.52
SRFBP1-201ENST00000339397 TNFRSF6BO95407 300 aa5.58□□□□□ -1.52
SRFBP1-201ENST00000339397 Q0VG73 95 aa5.58□□□□□ -1.52
SRFBP1-201ENST00000339397 PMCHL1Q16048 86 aa5.58□□□□□ -1.52
SRFBP1-201ENST00000339397 KHDC1LQ5JSQ8 128 aa5.58□□□□□ -1.52
SRFBP1-201ENST00000339397 Q6ZWC4 215 aa5.58□□□□□ -1.52
SRFBP1-201ENST00000339397 OR4B1Q8NGF8 309 aa5.58□□□□□ -1.52
SRFBP1-201ENST00000339397 SERTM2A0A1B0GWG4 89 aa5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 S100A7P31151 101 aa5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 TMEM78Q5T7P6 136 aa5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 COX8CQ7Z4L0 72 aa5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 MYOZ3Q8TDC0 251 aa5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 DCANP1Q8TF63 244 aa5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 URB1-AS1Q96HZ7 61 aa5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 C2CD3Q4AC94 2353 aa5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 FABP5P3A8MUU1 101 aa5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 GAS8-AS1O95177 125 aa5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 NTF3P20783 257 aa5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 HIST1H1AQ02539 215 aaPredicted RBP5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 C9orf47Q6ZRZ4 202 aa5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 ATP5L2Q7Z4Y8 100 aa5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 TMEM18Q96B42 140 aa5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 FAM231BA6NCW3 169 aa5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 IGKV3-20P01619 116 aa5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 ELANEP08246 267 aa5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 LGALS1P09382 135 aaKnown RBP5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 ZNF688P0C7X2 276 aa5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 PMCHP20382 165 aa5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 TDRG1Q3Y452 100 aa5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 RASL11AQ6T310 242 aa5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 Q8N2B8 174 aa5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 LINC00469Q8N7U9 141 aa5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 OR11H1Q8NG94 326 aa5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 UBE2E2Q96LR5 201 aa5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 FOXC2Q99958 501 aa5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 MS4A6AQ9H2W1 248 aa5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 CLEC5AQ9NY25 188 aa5.57□□□□□ -1.52
SRFBP1-201ENST00000339397 A0A1W2PRX2 142 aa5.56□□□□□ -1.52
SRFBP1-201ENST00000339397 RBAKDNA6NC62 111 aa5.56□□□□□ -1.52
SRFBP1-201ENST00000339397 CSN3P07498 182 aa5.56□□□□□ -1.52
SRFBP1-201ENST00000339397 JOSD1Q15040 202 aaPredicted RBP5.56□□□□□ -1.52
SRFBP1-201ENST00000339397 AMN1Q8IY45 258 aa5.56□□□□□ -1.52
SRFBP1-201ENST00000339397 ZFAND2AQ8N6M9 145 aa5.56□□□□□ -1.52
SRFBP1-201ENST00000339397 ARL6IP6Q8N6S5 226 aa5.56□□□□□ -1.52
SRFBP1-201ENST00000339397 LOC102724200A0A096LPH7 203 aaPredicted RBP5.56□□□□□ -1.52
SRFBP1-201ENST00000339397 K7EMT4 169 aa5.56□□□□□ -1.52
SRFBP1-201ENST00000339397 GPX1P07203 203 aa5.56□□□□□ -1.52
SRFBP1-201ENST00000339397 NDFIP1Q9BT67 221 aa5.56□□□□□ -1.52
SRFBP1-201ENST00000339397 SAMD10Q9BYL1 202 aa5.56□□□□□ -1.52
SRFBP1-201ENST00000339397 PRO1933Q9H354 126 aa5.56□□□□□ -1.52
SRFBP1-201ENST00000339397 NAGKQ9UJ70 344 aa5.56□□□□□ -1.52
SRFBP1-201ENST00000339397 SMKR1H3BMG3 65 aa5.55□□□□□ -1.52
SRFBP1-201ENST00000339397 CD5LO43866 347 aa5.55□□□□□ -1.52
SRFBP1-201ENST00000339397 IGLC6P0CF74 106 aa5.55□□□□□ -1.52
SRFBP1-201ENST00000339397 BMI1P35226 326 aa5.55□□□□□ -1.52
SRFBP1-201ENST00000339397 AMTP48728 403 aa5.55□□□□□ -1.52
SRFBP1-201ENST00000339397 TWIST1Q15672 202 aa5.55□□□□□ -1.52
SRFBP1-201ENST00000339397 ZNF124Q15973 351 aa5.55□□□□□ -1.52
SRFBP1-201ENST00000339397 OR10J3Q5JRS4 329 aa5.55□□□□□ -1.52
SRFBP1-201ENST00000339397 NIT1Q86X76 327 aa5.55□□□□□ -1.52
SRFBP1-201ENST00000339397 RNF152Q8N8N0 203 aa5.55□□□□□ -1.52
SRFBP1-201ENST00000339397 FER1L6-AS1Q8NA97 138 aa5.55□□□□□ -1.52
SRFBP1-201ENST00000339397 OR8A1Q8NGG7 326 aa5.55□□□□□ -1.52
SRFBP1-201ENST00000339397 TIMM8BQ9Y5J9 83 aaPredicted RBP5.55□□□□□ -1.52
SRFBP1-201ENST00000339397 TEP1Q99973 2627 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms