RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 PEF1Q9UBV8 284 aaKnown RBP9.49□□□□□ -0.89
VPS33B-201ENST00000333371 A1L4Q6 167 aa9.48□□□□□ -0.89
VPS33B-201ENST00000333371 CLPSL1A2RUU4 121 aa9.48□□□□□ -0.89
VPS33B-201ENST00000333371 OCIAD2Q56VL3 154 aa9.48□□□□□ -0.89
VPS33B-201ENST00000333371 CCDC140Q96MF4 163 aa9.48□□□□□ -0.89
VPS33B-201ENST00000333371 AGPAT4-IT1Q9H0P7 198 aa9.48□□□□□ -0.89
VPS33B-201ENST00000333371 J3KRW8 73 aa9.48□□□□□ -0.89
VPS33B-201ENST00000333371 K7EMI3 77 aa9.48□□□□□ -0.89
VPS33B-201ENST00000333371 MAP1LC3AQ9H492 121 aa9.48□□□□□ -0.89
VPS33B-201ENST00000333371 RPS20P60866 119 aaKnown RBP9.47□□□□□ -0.89
VPS33B-201ENST00000333371 EBI3Q14213 229 aa9.47□□□□□ -0.89
VPS33B-201ENST00000333371 KIR3DS1Q14943 382 aa9.47□□□□□ -0.89
VPS33B-201ENST00000333371 ADAMTSL5Q6ZMM2 481 aa9.47□□□□□ -0.89
VPS33B-201ENST00000333371 AJUBAQ96IF1 538 aa9.47□□□□□ -0.89
VPS33B-201ENST00000333371 CACNA1AO00555 2505 aa9.47□□□□□ -0.89
VPS33B-201ENST00000333371 SAP30O75446 220 aa9.47□□□□□ -0.89
VPS33B-201ENST00000333371 C1orf122Q6ZSJ8 110 aa9.47□□□□□ -0.89
VPS33B-201ENST00000333371 SIRPDQ9H106 197 aa9.47□□□□□ -0.89
VPS33B-201ENST00000333371 IGHV3OR16-10A0A075B7F0 116 aa9.46□□□□□ -0.89
VPS33B-201ENST00000333371 PRSS1P07477 247 aa9.46□□□□□ -0.89
VPS33B-201ENST00000333371 SAA4P35542 130 aa9.46□□□□□ -0.89
VPS33B-201ENST00000333371 SEC11AP67812 179 aa9.46□□□□□ -0.89
VPS33B-201ENST00000333371 OR1N2Q8NGR9 330 aa9.46□□□□□ -0.89
VPS33B-201ENST00000333371 TMEM158Q8WZ71 300 aa9.46□□□□□ -0.89
VPS33B-201ENST00000333371 TRAV8-2A0A0B4J237 113 aa9.46□□□□□ -0.9
VPS33B-201ENST00000333371 GAGE10A6NGK3 116 aa9.46□□□□□ -0.9
VPS33B-201ENST00000333371 FBLL1A6NHQ2 334 aaKnown RBP9.46□□□□□ -0.9
VPS33B-201ENST00000333371 DEFB1P60022 68 aa9.46□□□□□ -0.9
VPS33B-201ENST00000333371 TMEM219Q86XT9 240 aa9.46□□□□□ -0.9
VPS33B-201ENST00000333371 TMEM190Q8WZ59 177 aa9.46□□□□□ -0.9
VPS33B-201ENST00000333371 VPS25Q9BRG1 176 aa9.46□□□□□ -0.9
VPS33B-201ENST00000333371 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.46□□□□□ -0.92e-8■■■■□ 19.9
VPS33B-201ENST00000333371 IGF1P05019 195 aa9.46□□□□□ -0.9
VPS33B-201ENST00000333371 ODF1Q14990 250 aa9.46□□□□□ -0.9
VPS33B-201ENST00000333371 FAM110DQ8TAY7 271 aaPredicted RBP9.46□□□□□ -0.9
VPS33B-201ENST00000333371 DPF1Q92782 380 aa9.46□□□□□ -0.9
VPS33B-201ENST00000333371 UFC1Q9Y3C8 167 aa9.46□□□□□ -0.9
VPS33B-201ENST00000333371 LINC01559Q495D7 138 aa9.45□□□□□ -0.9
VPS33B-201ENST00000333371 GTSCR1Q86UQ5 136 aa9.45□□□□□ -0.9
VPS33B-201ENST00000333371 FOXC2Q99958 501 aa9.45□□□□□ -0.9
VPS33B-201ENST00000333371 CNFNQ9BYD5 112 aa9.45□□□□□ -0.9
VPS33B-201ENST00000333371 BPESC1Q9GZL8 116 aa9.45□□□□□ -0.9
VPS33B-201ENST00000333371 C9orf118A6NHY6 69 aa9.45□□□□□ -0.9
VPS33B-201ENST00000333371 MINOS1Q5TGZ0 78 aa9.45□□□□□ -0.9
VPS33B-201ENST00000333371 HHLA3Q9XRX5 114 aa9.45□□□□□ -0.9
VPS33B-201ENST00000333371 MINOS1-NBL1R4GNA1 71 aa9.45□□□□□ -0.9
VPS33B-201ENST00000333371 TMEM8BA6NDV4 472 aa9.44□□□□□ -0.9
VPS33B-201ENST00000333371 OOSP1A8MZH6 123 aa9.44□□□□□ -0.9
VPS33B-201ENST00000333371 FCER1GP30273 86 aa9.44□□□□□ -0.9
VPS33B-201ENST00000333371 HSD52Q0P140 79 aa9.44□□□□□ -0.9
VPS33B-201ENST00000333371 AP1S3Q96PC3 154 aa9.44□□□□□ -0.9
VPS33B-201ENST00000333371 A0A0G2JLM5 398 aa9.44□□□□□ -0.9
VPS33B-201ENST00000333371 GOSR1O95249 250 aa9.44□□□□□ -0.9
VPS33B-201ENST00000333371 PRR9Q5T870 116 aa9.44□□□□□ -0.9
VPS33B-201ENST00000333371 C8orf86Q6ZUL3 223 aa9.44□□□□□ -0.9
VPS33B-201ENST00000333371 IGHV7-4-1A0A0J9YVY3 117 aa9.43□□□□□ -0.9
VPS33B-201ENST00000333371 A6NDN8 102 aa9.43□□□□□ -0.9
VPS33B-201ENST00000333371 H3BRM9 83 aa9.43□□□□□ -0.9
VPS33B-201ENST00000333371 K7ERJ3 54 aa9.43□□□□□ -0.9
VPS33B-201ENST00000333371 SCGB2A1O75556 95 aa9.43□□□□□ -0.9
VPS33B-201ENST00000333371 CSMD2Q7Z408 3487 aa9.43□□□□□ -0.9
VPS33B-201ENST00000333371 GCSHP23434 173 aa9.43□□□□□ -0.9
VPS33B-201ENST00000333371 FXYD2P54710 66 aa9.43□□□□□ -0.9
VPS33B-201ENST00000333371 UFSP1Q6NVU6 142 aa9.43□□□□□ -0.9
VPS33B-201ENST00000333371 OR9G4Q8NGQ1 327 aa9.43□□□□□ -0.9
VPS33B-201ENST00000333371 SVIPQ8NHG7 77 aa9.43□□□□□ -0.9
VPS33B-201ENST00000333371 CSPG4Q6UVK1 2322 aa9.43□□□□□ -0.9
VPS33B-201ENST00000333371 IGLV2-18A0A075B6J9 118 aa9.42□□□□□ -0.9
VPS33B-201ENST00000333371 S100A7P31151 101 aa9.42□□□□□ -0.9
VPS33B-201ENST00000333371 TMEM160Q9NX00 188 aa9.42□□□□□ -0.9
VPS33B-201ENST00000333371 TRAV40A0A0B4J280 105 aa9.42□□□□□ -0.9
VPS33B-201ENST00000333371 H3BVH4 76 aa9.42□□□□□ -0.9
VPS33B-201ENST00000333371 PPBPP02775 128 aa9.42□□□□□ -0.9
VPS33B-201ENST00000333371 TMEM78Q5T7P6 136 aa9.42□□□□□ -0.9
VPS33B-201ENST00000333371 ZC2HC1BQ5TFG8 222 aa9.42□□□□□ -0.9
VPS33B-201ENST00000333371 OR2K2Q8NGT1 345 aa9.42□□□□□ -0.9
VPS33B-201ENST00000333371 NXT2Q9NPJ8 142 aaKnown RBP9.42□□□□□ -0.9
VPS33B-201ENST00000333371 ACACBO00763 2458 aa9.42□□□□□ -0.9
VPS33B-201ENST00000333371 SMIM17P0DL12 118 aa9.41□□□□□ -0.9
VPS33B-201ENST00000333371 C20orf173Q96LM9 149 aa9.41□□□□□ -0.9
VPS33B-201ENST00000333371 TRBV12-3P01733 135 aa9.41□□□□□ -0.9
VPS33B-201ENST00000333371 IGKCP01834 107 aa9.41□□□□□ -0.9
VPS33B-201ENST00000333371 UBE2E1P51965 193 aa9.41□□□□□ -0.9
VPS33B-201ENST00000333371 LMO4P61968 165 aa9.41□□□□□ -0.9
VPS33B-201ENST00000333371 SRSF2Q01130 221 aaKnown RBP9.41□□□□□ -0.9
VPS33B-201ENST00000333371 NRACQ8N912 160 aa9.41□□□□□ -0.9
VPS33B-201ENST00000333371 OR4X2Q8NGF9 303 aa9.41□□□□□ -0.9
VPS33B-201ENST00000333371 MRPL35Q9NZE8 188 aaKnown RBP9.41□□□□□ -0.9
VPS33B-201ENST00000333371 CENPVL3A0A0U1RRI6 287 aa9.41□□□□□ -0.9
VPS33B-201ENST00000333371 Q8N8P6 123 aa9.41□□□□□ -0.9
VPS33B-201ENST00000333371 METTL26Q96S19 204 aa9.41□□□□□ -0.9
VPS33B-201ENST00000333371 SLC50A1Q9BRV3 221 aa9.41□□□□□ -0.9
VPS33B-201ENST00000333371 MEGF9Q9H1U4 602 aa9.41□□□□□ -0.9
VPS33B-201ENST00000333371 KLK15Q9H2R5 256 aa9.41□□□□□ -0.9
VPS33B-201ENST00000333371 ZMAT4Q9H898 229 aa9.41□□□□□ -0.9
VPS33B-201ENST00000333371 IGKV3-7A0A075B6H7 116 aa9.4□□□□□ -0.9
VPS33B-201ENST00000333371 LINC01546A6NGU7 62 aa9.4□□□□□ -0.9
VPS33B-201ENST00000333371 IGHV4-39P01824 125 aa9.4□□□□□ -0.9
VPS33B-201ENST00000333371 SPANXN1Q5VSR9 72 aa9.4□□□□□ -0.9
VPS33B-201ENST00000333371 SORL1Q92673 2214 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms