RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 TRBV7-1A0A0A6YYK4 115 aa13.9□□□□□ -0.18
LYSMD4-201ENST00000332728 Q6ZVH6 145 aa13.9□□□□□ -0.18
LYSMD4-201ENST00000332728 OR8A1Q8NGG7 326 aa13.9□□□□□ -0.18
LYSMD4-201ENST00000332728 MIEN1Q9BRT3 115 aa13.9□□□□□ -0.18
LYSMD4-201ENST00000332728 PRR9Q5T870 116 aa13.9□□□□□ -0.18
LYSMD4-201ENST00000332728 TRAV26-2A0A0B4J265 109 aa13.89□□□□□ -0.19
LYSMD4-201ENST00000332728 SAPCD1Q5SSQ6 148 aa13.89□□□□□ -0.19
LYSMD4-201ENST00000332728 NDFIP1Q9BT67 221 aa13.89□□□□□ -0.19
LYSMD4-201ENST00000332728 M0R143 59 aa13.89□□□□□ -0.19
LYSMD4-201ENST00000332728 IGLL1P15814 213 aa13.89□□□□□ -0.19
LYSMD4-201ENST00000332728 MRPL51Q4U2R6 128 aaKnown RBP13.89□□□□□ -0.19
LYSMD4-201ENST00000332728 PRSS57Q6UWY2 283 aa13.89□□□□□ -0.19
LYSMD4-201ENST00000332728 FA2HQ7L5A8 372 aa13.89□□□□□ -0.19
LYSMD4-201ENST00000332728 IGKV3-20P01619 116 aa13.88□□□□□ -0.19
LYSMD4-201ENST00000332728 TMEM78Q5T7P6 136 aa13.88□□□□□ -0.19
LYSMD4-201ENST00000332728 PRELID3AQ96N28 172 aa13.88□□□□□ -0.19
LYSMD4-201ENST00000332728 UFC1Q9Y3C8 167 aa13.88□□□□□ -0.19
LYSMD4-201ENST00000332728 OR4C46A6NHA9 309 aa13.88□□□□□ -0.19
LYSMD4-201ENST00000332728 CKS2P33552 79 aa13.88□□□□□ -0.19
LYSMD4-201ENST00000332728 TMEM70Q9BUB7 260 aa13.88□□□□□ -0.19
LYSMD4-201ENST00000332728 IGKV3D-20A0A0C4DH25 116 aa13.87□□□□□ -0.19
LYSMD4-201ENST00000332728 B4DSR2 109 aa13.87□□□□□ -0.19
LYSMD4-201ENST00000332728 NPYP01303 97 aa13.87□□□□□ -0.19
LYSMD4-201ENST00000332728 OR10AG1Q8NH19 301 aa13.87□□□□□ -0.19
LYSMD4-201ENST00000332728 A6NDX4 124 aa13.87□□□□□ -0.19
LYSMD4-201ENST00000332728 C18orf15Q96N68 181 aa13.87□□□□□ -0.19
LYSMD4-201ENST00000332728 AP5S1Q9NUS5 200 aa13.87□□□□□ -0.19
LYSMD4-201ENST00000332728 FABP5P3A8MUU1 101 aa13.86□□□□□ -0.19
LYSMD4-201ENST00000332728 ERASQ7Z444 233 aa13.86□□□□□ -0.19
LYSMD4-201ENST00000332728 C20orf144Q9BQM9 153 aa13.86□□□□□ -0.19
LYSMD4-201ENST00000332728 BEX4Q9NWD9 120 aaPredicted RBP13.86□□□□□ -0.19
LYSMD4-201ENST00000332728 SIGLEC8Q9NYZ4 499 aa13.86□□□□□ -0.19
LYSMD4-201ENST00000332728 FAM231BA6NCW3 169 aa13.86□□□□□ -0.19
LYSMD4-201ENST00000332728 CTRLP40313 264 aa13.86□□□□□ -0.19
LYSMD4-201ENST00000332728 HINT1P49773 126 aaPredicted RBP13.86□□□□□ -0.19
LYSMD4-201ENST00000332728 LINC00469Q8N7U9 141 aa13.86□□□□□ -0.19
LYSMD4-201ENST00000332728 SPOCK3Q9BQ16 436 aa13.86□□□□□ -0.19
LYSMD4-201ENST00000332728 TRBV6-1A0A0K0K1D8 114 aa13.86□□□□□ -0.19
LYSMD4-201ENST00000332728 COX6B1P14854 86 aa13.86□□□□□ -0.19
LYSMD4-201ENST00000332728 HIST1H1AQ02539 215 aaPredicted RBP13.86□□□□□ -0.19
LYSMD4-201ENST00000332728 MEGF9Q9H1U4 602 aa13.86□□□□□ -0.19
LYSMD4-201ENST00000332728 JMJD1CQ15652 2540 aa13.85□□□□□ -0.19
LYSMD4-201ENST00000332728 SYS1-DBNDD2H3BUS1 97 aa13.85□□□□□ -0.19
LYSMD4-201ENST00000332728 IGLC3P0DOY3 106 aa13.85□□□□□ -0.19
LYSMD4-201ENST00000332728 FAM104BQ5XKR9 115 aa13.85□□□□□ -0.19
LYSMD4-201ENST00000332728 AKAP9Q99996 3911 aa13.85□□□□□ -0.19
LYSMD4-201ENST00000332728 GPHB5Q86YW7 130 aa13.85□□□□□ -0.19
LYSMD4-201ENST00000332728 H3BVH4 76 aa13.84□□□□□ -0.19
LYSMD4-201ENST00000332728 IGHG2P01859 326 aa13.84□□□□□ -0.19
LYSMD4-201ENST00000332728 RAB4AP20338 218 aa13.84□□□□□ -0.19
LYSMD4-201ENST00000332728 BMI1P35226 326 aa13.84□□□□□ -0.19
LYSMD4-201ENST00000332728 HNRNPA3P51991 378 aaKnown RBP13.84□□□□□ -0.19
LYSMD4-201ENST00000332728 HECTD1Q9ULT8 2610 aa13.84□□□□□ -0.19
LYSMD4-201ENST00000332728 RAB9AP51151 201 aa13.84□□□□□ -0.19
LYSMD4-201ENST00000332728 ZNF843Q8N446 348 aa13.84□□□□□ -0.19
LYSMD4-201ENST00000332728 C2orf88Q9BSF0 95 aa13.84□□□□□ -0.19
LYSMD4-201ENST00000332728 C19orf54Q5BKX5 351 aa13.83□□□□□ -0.19
LYSMD4-201ENST00000332728 RHPN1-AS1Q9BWJ2 59 aa13.83□□□□□ -0.19
LYSMD4-201ENST00000332728 NPFFR1Q9GZQ6 430 aa13.83□□□□□ -0.19
LYSMD4-201ENST00000332728 NDUFS8O00217 210 aa13.83□□□□□ -0.2
LYSMD4-201ENST00000332728 OR5AL1P0C617 328 aa13.82□□□□□ -0.2
LYSMD4-201ENST00000332728 ORMDL3Q8N138 153 aa13.82□□□□□ -0.2
LYSMD4-201ENST00000332728 FAM223BA6NKX1 122 aa13.82□□□□□ -0.2
LYSMD4-201ENST00000332728 M0R381 172 aa13.82□□□□□ -0.2
LYSMD4-201ENST00000332728 RPLP1P05386 114 aaKnown RBP13.82□□□□□ -0.2
LYSMD4-201ENST00000332728 RNASE4P34096 147 aaKnown RBP13.82□□□□□ -0.2
LYSMD4-201ENST00000332728 FAM223AQ8IWN6 122 aa13.82□□□□□ -0.2
LYSMD4-201ENST00000332728 DUX3Q96PT4 197 aa13.82□□□□□ -0.2
LYSMD4-201ENST00000332728 SLC50A1Q9BRV3 221 aa13.82□□□□□ -0.2
LYSMD4-201ENST00000332728 TCAPO15273 167 aa13.81□□□□□ -0.2
LYSMD4-201ENST00000332728 ZMAT5Q9UDW3 170 aaKnown RBP13.81□□□□□ -0.2
LYSMD4-201ENST00000332728 CHCHD1Q96BP2 118 aaKnown RBP13.81□□□□□ -0.2
LYSMD4-201ENST00000332728 MAP1LC3CQ9BXW4 147 aa13.81□□□□□ -0.2
LYSMD4-201ENST00000332728 TRAV9-2A0A087WT02 112 aa13.8□□□□□ -0.2
LYSMD4-201ENST00000332728 IGLC6P0CF74 106 aa13.8□□□□□ -0.2
LYSMD4-201ENST00000332728 NUTF2P61970 127 aaKnown RBP13.8□□□□□ -0.2
LYSMD4-201ENST00000332728 DEFB136Q30KP8 78 aa13.8□□□□□ -0.2
LYSMD4-201ENST00000332728 A0A096LNJ9 63 aa13.8□□□□□ -0.2
LYSMD4-201ENST00000332728 ZNF25P17030 456 aaPredicted RBP13.8□□□□□ -0.2
LYSMD4-201ENST00000332728 CYB5R2Q6BCY4 276 aa13.8□□□□□ -0.2
LYSMD4-201ENST00000332728 A0A087X0K7 114 aa13.79□□□□□ -0.2
LYSMD4-201ENST00000332728 STPG4Q8N801 248 aa13.79□□□□□ -0.2
LYSMD4-201ENST00000332728 UQCR10Q9UDW1 63 aa13.79□□□□□ -0.2
LYSMD4-201ENST00000332728 C18orf65Q6ZTR6 163 aa13.79□□□□□ -0.2
LYSMD4-201ENST00000332728 U3KQE9 123 aa13.79□□□□□ -0.2
LYSMD4-201ENST00000332728 SPANXN1Q5VSR9 72 aa13.78□□□□□ -0.2
LYSMD4-201ENST00000332728 LURAP1LQ8IV03 231 aa13.78□□□□□ -0.2
LYSMD4-201ENST00000332728 LINC01356Q8N9X3 169 aa13.78□□□□□ -0.2
LYSMD4-201ENST00000332728 RNF185Q96GF1 192 aa13.78□□□□□ -0.2
LYSMD4-201ENST00000332728 GNRH2O43555 120 aa13.78□□□□□ -0.2
LYSMD4-201ENST00000332728 Q6AWC8 147 aa13.77□□□□□ -0.2
LYSMD4-201ENST00000332728 C11orf44Q8N8P7 122 aa13.77□□□□□ -0.2
LYSMD4-201ENST00000332728 FASNP49327 2511 aaKnown RBP13.77□□□□□ -0.2
LYSMD4-201ENST00000332728 ZNF688P0C7X2 276 aa13.77□□□□□ -0.21
LYSMD4-201ENST00000332728 TSPOP30536 169 aa13.77□□□□□ -0.21
LYSMD4-201ENST00000332728 NDUFA4O00483 81 aa13.76□□□□□ -0.21
LYSMD4-201ENST00000332728 HOXA3O43365 443 aaPredicted RBP13.76□□□□□ -0.21
LYSMD4-201ENST00000332728 SYNJ2BPP57105 145 aa13.76□□□□□ -0.21
LYSMD4-201ENST00000332728 CACNG7P62955 275 aa13.76□□□□□ -0.21
LYSMD4-201ENST00000332728 KHDC1LQ5JSQ8 128 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms