RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 E7EQL1 145 aa11.22□□□□□ -0.61
SNX20-202ENST00000330943 E9PLD3 99 aa11.22□□□□□ -0.61
SNX20-202ENST00000330943 H3BMG7 143 aa11.22□□□□□ -0.61
SNX20-202ENST00000330943 IGHG4P01861 327 aa11.22□□□□□ -0.61
SNX20-202ENST00000330943 HES1Q14469 280 aa11.22□□□□□ -0.61
SNX20-202ENST00000330943 IGFL3Q6UXB1 125 aa11.22□□□□□ -0.61
SNX20-202ENST00000330943 MAPKAPK5-AS1Q8N8E1 139 aa11.22□□□□□ -0.61
SNX20-202ENST00000330943 SPANXB1Q9NS25 103 aaPredicted RBP11.22□□□□□ -0.61
SNX20-202ENST00000330943 CSMD2Q7Z408 3487 aa11.21□□□□□ -0.61
SNX20-202ENST00000330943 IGHV3-35A0A0C4DH35 117 aa11.21□□□□□ -0.61
SNX20-202ENST00000330943 FABP5P3A8MUU1 101 aa11.21□□□□□ -0.61
SNX20-202ENST00000330943 LY6LH3BQJ8 138 aa11.21□□□□□ -0.61
SNX20-202ENST00000330943 DTX2Q86UW9 622 aa11.21□□□□□ -0.61
SNX20-202ENST00000330943 MTURNQ8N3F0 131 aa11.21□□□□□ -0.61
SNX20-202ENST00000330943 CNFNQ9BYD5 112 aa11.21□□□□□ -0.61
SNX20-202ENST00000330943 C21orf62Q9NYP8 219 aa11.21□□□□□ -0.61
SNX20-202ENST00000330943 SMPXQ9UHP9 88 aa11.21□□□□□ -0.61
SNX20-202ENST00000330943 SMAD5-AS1Q9Y6J3 95 aa11.21□□□□□ -0.61
SNX20-202ENST00000330943 IGLV11-55A0A075B6I3 123 aa11.21□□□□□ -0.62
SNX20-202ENST00000330943 GAGE12HA6NDE8 117 aa11.21□□□□□ -0.62
SNX20-202ENST00000330943 FOXI2Q6ZQN5 318 aa11.21□□□□□ -0.62
SNX20-202ENST00000330943 SH2D6Q7Z4S9 175 aa11.21□□□□□ -0.62
SNX20-202ENST00000330943 ARPC1AQ92747 370 aa11.21□□□□□ -0.62
SNX20-202ENST00000330943 DYNAPQ8N1N2 210 aa11.2□□□□□ -0.62
SNX20-202ENST00000330943 AGRNO00468 2067 aa11.2□□□□□ -0.62
SNX20-202ENST00000330943 F8W1H4 67 aa11.2□□□□□ -0.62
SNX20-202ENST00000330943 ETDBQ3ZM63 59 aa11.2□□□□□ -0.62
SNX20-202ENST00000330943 CD300EQ496F6 205 aaPredicted RBP11.2□□□□□ -0.62
SNX20-202ENST00000330943 AMTNQ6UX39 209 aa11.2□□□□□ -0.62
SNX20-202ENST00000330943 Q8N8P6 123 aa11.2□□□□□ -0.62
SNX20-202ENST00000330943 TRGV3P03979 118 aa11.19□□□□□ -0.62
SNX20-202ENST00000330943 PRAC2D3DTV9 90 aa11.19□□□□□ -0.62
SNX20-202ENST00000330943 J3QR89 54 aa11.19□□□□□ -0.62
SNX20-202ENST00000330943 C12orf74Q32Q52 190 aa11.19□□□□□ -0.62
SNX20-202ENST00000330943 HIST1H4GQ99525 98 aa11.19□□□□□ -0.62
SNX20-202ENST00000330943 LINC01559Q495D7 138 aa11.19□□□□□ -0.62
SNX20-202ENST00000330943 MYOZ3Q8TDC0 251 aa11.19□□□□□ -0.62
SNX20-202ENST00000330943 CFHR4Q92496 578 aa11.19□□□□□ -0.62
SNX20-202ENST00000330943 PSMG3-AS1Q96PY0 264 aa11.19□□□□□ -0.62
SNX20-202ENST00000330943 FLNCQ14315 2725 aa11.18□□□□□ -0.62
SNX20-202ENST00000330943 IGLV2-18A0A075B6J9 118 aa11.18□□□□□ -0.62
SNX20-202ENST00000330943 TRAV26-2A0A0B4J265 109 aa11.18□□□□□ -0.62
SNX20-202ENST00000330943 SCGB1A1P11684 91 aa11.18□□□□□ -0.62
SNX20-202ENST00000330943 SRSF2Q01130 221 aaKnown RBP11.18□□□□□ -0.62
SNX20-202ENST00000330943 SRSF1Q07955 248 aaKnown RBP eCLIP11.18□□□□□ -0.62
SNX20-202ENST00000330943 IL17RELQ6ZVW7 336 aa11.18□□□□□ -0.62
SNX20-202ENST00000330943 TTC9CQ8N5M4 171 aa11.18□□□□□ -0.62
SNX20-202ENST00000330943 PRRG2O14669 202 aa11.18□□□□□ -0.62
SNX20-202ENST00000330943 NDUFA3O95167 84 aa11.18□□□□□ -0.62
SNX20-202ENST00000330943 HLA-DRB4P13762 266 aa11.18□□□□□ -0.62
SNX20-202ENST00000330943 NDPQ00604 133 aa11.18□□□□□ -0.62
SNX20-202ENST00000330943 C5orf64Q2M2E5 130 aa11.18□□□□□ -0.62
SNX20-202ENST00000330943 RNF182Q8N6D2 247 aa11.18□□□□□ -0.62
SNX20-202ENST00000330943 HLA-DRB4X5D2U9 266 aa11.18□□□□□ -0.62
SNX20-202ENST00000330943 ZNF48Q96MX3 618 aaPredicted RBP11.17□□□□□ -0.62
SNX20-202ENST00000330943 SPAG8Q99932 426 aaPredicted RBP11.17□□□□□ -0.62
SNX20-202ENST00000330943 DPM3Q9P2X0 92 aa11.17□□□□□ -0.62
SNX20-202ENST00000330943 UFC1Q9Y3C8 167 aa11.17□□□□□ -0.62
SNX20-202ENST00000330943 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.17□□□□□ -0.62
SNX20-202ENST00000330943 EFNA4P52798 201 aa11.17□□□□□ -0.62
SNX20-202ENST00000330943 KLRD1Q13241 179 aa11.17□□□□□ -0.62
SNX20-202ENST00000330943 LAGE3Q14657 143 aa11.16□□□□□ -0.62
SNX20-202ENST00000330943 SVIPQ8NHG7 77 aa11.16□□□□□ -0.62
SNX20-202ENST00000330943 CUBNO60494 3623 aa11.16□□□□□ -0.62
SNX20-202ENST00000330943 NCBP2LA6PVI3 153 aaKnown RBP11.16□□□□□ -0.62
SNX20-202ENST00000330943 CTSGP08311 255 aa11.16□□□□□ -0.62
SNX20-202ENST00000330943 NPBQ8NG41 125 aa11.16□□□□□ -0.62
SNX20-202ENST00000330943 IGKV3D-20A0A0C4DH25 116 aa11.15□□□□□ -0.62
SNX20-202ENST00000330943 TAL2Q16559 108 aa11.15□□□□□ -0.62
SNX20-202ENST00000330943 GAGE13Q4V321 117 aa11.15□□□□□ -0.62
SNX20-202ENST00000330943 CELSR2Q9HCU4 2923 aa11.15□□□□□ -0.62
SNX20-202ENST00000330943 MYO18BQ8IUG5 2567 aa11.15□□□□□ -0.62
SNX20-202ENST00000330943 ACACBO00763 2458 aa11.15□□□□□ -0.62
SNX20-202ENST00000330943 A0A087WX48 190 aa11.15□□□□□ -0.62
SNX20-202ENST00000330943 LCNL1Q6ZST4 164 aa11.15□□□□□ -0.62
SNX20-202ENST00000330943 C11orf21Q9P2W6 132 aa11.15□□□□□ -0.62
SNX20-202ENST00000330943 CFAP46Q8IYW2 2715 aa11.15□□□□□ -0.63
SNX20-202ENST00000330943 CCDC144NLQ6NUI1 221 aa11.15□□□□□ -0.63
SNX20-202ENST00000330943 PKD1L2Q7Z442 2459 aa11.14□□□□□ -0.63
SNX20-202ENST00000330943 INSL3P51460 131 aa11.14□□□□□ -0.63
SNX20-202ENST00000330943 RRN3P1Q2M238 152 aa11.14□□□□□ -0.63
SNX20-202ENST00000330943 NRACQ8N912 160 aa11.14□□□□□ -0.63
SNX20-202ENST00000330943 SPATA25Q9BR10 227 aa11.14□□□□□ -0.63
SNX20-202ENST00000330943 IGHV3-66A0A0C4DH42 116 aa11.14□□□□□ -0.63
SNX20-202ENST00000330943 A0A1B0GV72 72 aa11.14□□□□□ -0.63
SNX20-202ENST00000330943 PLNP26678 52 aa11.13□□□□□ -0.63
SNX20-202ENST00000330943 B9A039 149 aa11.13□□□□□ -0.63
SNX20-202ENST00000330943 SCGB2A1O75556 95 aa11.13□□□□□ -0.63
SNX20-202ENST00000330943 Q5PR19 223 aa11.13□□□□□ -0.63
SNX20-202ENST00000330943 ATP6V0BQ99437 205 aa11.13□□□□□ -0.63
SNX20-202ENST00000330943 KLK15Q9H2R5 256 aa11.13□□□□□ -0.63
SNX20-202ENST00000330943 TRBV7-3A0A075B6L6 115 aa11.12□□□□□ -0.63
SNX20-202ENST00000330943 ZNF502Q8TBZ5 544 aa11.12□□□□□ -0.63
SNX20-202ENST00000330943 IGHV3OR16-13A0A075B7E8 117 aa11.12□□□□□ -0.63
SNX20-202ENST00000330943 IGHV3-74A0A0B4J1X5 117 aa11.12□□□□□ -0.63
SNX20-202ENST00000330943 ATP5G2Q06055 141 aa11.12□□□□□ -0.63
SNX20-202ENST00000330943 Q8NA96 180 aa11.12□□□□□ -0.63
SNX20-202ENST00000330943 PRO0461Q9UI25 63 aa11.12□□□□□ -0.63
SNX20-202ENST00000330943 POLQO75417 2590 aa11.12□□□□□ -0.63
SNX20-202ENST00000330943 OR11H12B2RN74 326 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms