RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 C16orf95Q9H693 158 aa9.67□□□□□ -0.86
PTPN6-201ENST00000318974 ANK3Q12955 4377 aaKnown RBP9.67□□□□□ -0.86
PTPN6-201ENST00000318974 CLPSL1A2RUU4 121 aa9.66□□□□□ -0.86
PTPN6-201ENST00000318974 URB1-AS1Q96HZ7 61 aa9.66□□□□□ -0.86
PTPN6-201ENST00000318974 C8orf49Q96NF6 230 aa9.66□□□□□ -0.86
PTPN6-201ENST00000318974 METTL26Q96S19 204 aa9.66□□□□□ -0.86
PTPN6-201ENST00000318974 SMAD5-AS1Q9Y6J3 95 aa9.66□□□□□ -0.86
PTPN6-201ENST00000318974 MYO9AB2RTY4 2548 aa9.66□□□□□ -0.86
PTPN6-201ENST00000318974 M0R143 59 aa9.66□□□□□ -0.86
PTPN6-201ENST00000318974 DLEU1O43261 78 aa9.66□□□□□ -0.86
PTPN6-201ENST00000318974 LGALS1P09382 135 aaKnown RBP9.66□□□□□ -0.86
PTPN6-201ENST00000318974 ARMS2P0C7Q2 107 aa9.66□□□□□ -0.86
PTPN6-201ENST00000318974 PMCHL1Q16048 86 aa9.66□□□□□ -0.86
PTPN6-201ENST00000318974 GOLT1BQ9Y3E0 138 aa9.66□□□□□ -0.86
PTPN6-201ENST00000318974 A0A087X0K7 114 aa9.65□□□□□ -0.86
PTPN6-201ENST00000318974 CRLF1O75462 422 aa9.65□□□□□ -0.86
PTPN6-201ENST00000318974 G0S2P27469 103 aa9.65□□□□□ -0.86
PTPN6-201ENST00000318974 CTRLP40313 264 aa9.65□□□□□ -0.86
PTPN6-201ENST00000318974 PRR25Q96S07 402 aa9.65□□□□□ -0.86
PTPN6-201ENST00000318974 ASCL2Q99929 193 aa9.65□□□□□ -0.86
PTPN6-201ENST00000318974 SNHG12Q9BXW3 62 aa9.65□□□□□ -0.86
PTPN6-201ENST00000318974 IGKV2-40A0A087WW87 121 aaPredicted RBP9.64□□□□□ -0.87
PTPN6-201ENST00000318974 ZNF207O43670 478 aaKnown RBP9.64□□□□□ -0.87
PTPN6-201ENST00000318974 TCF21O43680 179 aa9.64□□□□□ -0.87
PTPN6-201ENST00000318974 BUB3O43684 328 aa9.64□□□□□ -0.87
PTPN6-201ENST00000318974 IGKV2D-40P01614 121 aaPredicted RBP9.64□□□□□ -0.87
PTPN6-201ENST00000318974 UNQ9165/PRO28630Q6UXU0 137 aa9.64□□□□□ -0.87
PTPN6-201ENST00000318974 ZNF705AQ6ZN79 300 aaPredicted RBP9.64□□□□□ -0.87
PTPN6-201ENST00000318974 TMEM189A5PLL7 270 aa9.64□□□□□ -0.87
PTPN6-201ENST00000318974 LINC01006Q8NI28 216 aa9.64□□□□□ -0.87
PTPN6-201ENST00000318974 U3KQE9 123 aa9.64□□□□□ -0.87
PTPN6-201ENST00000318974 C2orf70A6NJV1 201 aa9.63□□□□□ -0.87
PTPN6-201ENST00000318974 SH2D1AO60880 128 aa9.63□□□□□ -0.87
PTPN6-201ENST00000318974 NDUFA7O95182 113 aa9.63□□□□□ -0.87
PTPN6-201ENST00000318974 ZNF25P17030 456 aaPredicted RBP9.63□□□□□ -0.87
PTPN6-201ENST00000318974 FAM106AQ4KMX7 169 aa9.63□□□□□ -0.87
PTPN6-201ENST00000318974 SPATA45Q537H7 98 aa9.63□□□□□ -0.87
PTPN6-201ENST00000318974 EBLN2Q6P2I7 272 aa9.63□□□□□ -0.87
PTPN6-201ENST00000318974 ZNF493Q6ZR52 646 aa9.63□□□□□ -0.87
PTPN6-201ENST00000318974 GPHB5Q86YW7 130 aa9.63□□□□□ -0.87
PTPN6-201ENST00000318974 TMEM208Q9BTX3 173 aa9.63□□□□□ -0.87
PTPN6-201ENST00000318974 OTOGQ6ZRI0 2925 aa9.63□□□□□ -0.87
PTPN6-201ENST00000318974 ACANP16112 2415 aa9.63□□□□□ -0.87
PTPN6-201ENST00000318974 BMI1P35226 326 aa9.63□□□□□ -0.87
PTPN6-201ENST00000318974 RPS20P60866 119 aaKnown RBP9.63□□□□□ -0.87
PTPN6-201ENST00000318974 TCTEX1D4Q5JR98 221 aa9.63□□□□□ -0.87
PTPN6-201ENST00000318974 PRR31Q5SQ13 230 aa9.63□□□□□ -0.87
PTPN6-201ENST00000318974 SLC50A1Q9BRV3 221 aa9.63□□□□□ -0.87
PTPN6-201ENST00000318974 OR5AL1P0C617 328 aa9.62□□□□□ -0.87
PTPN6-201ENST00000318974 PRB4P10163 310 aaPredicted RBP9.62□□□□□ -0.87
PTPN6-201ENST00000318974 SRSF2Q01130 221 aaKnown RBP9.62□□□□□ -0.87
PTPN6-201ENST00000318974 COTL1Q14019 142 aa9.62□□□□□ -0.87
PTPN6-201ENST00000318974 LCN12Q6JVE5 192 aa9.62□□□□□ -0.87
PTPN6-201ENST00000318974 NOTCH2Q04721 2471 aa9.62□□□□□ -0.87
PTPN6-201ENST00000318974 IGHV4OR15-8A0A075B7B6 117 aa9.62□□□□□ -0.87
PTPN6-201ENST00000318974 IGHV3OR16-13A0A075B7E8 117 aa9.62□□□□□ -0.87
PTPN6-201ENST00000318974 A0A087WW49 117 aa9.62□□□□□ -0.87
PTPN6-201ENST00000318974 IGHV3-49A0A0A0MS15 119 aa9.62□□□□□ -0.87
PTPN6-201ENST00000318974 IGHV3-74A0A0B4J1X5 117 aa9.62□□□□□ -0.87
PTPN6-201ENST00000318974 IGHV1-24A0A0C4DH33 117 aa9.62□□□□□ -0.87
PTPN6-201ENST00000318974 IGHV3-66A0A0C4DH42 116 aa9.62□□□□□ -0.87
PTPN6-201ENST00000318974 RBAKDNA6NC62 111 aa9.62□□□□□ -0.87
PTPN6-201ENST00000318974 CRXO43186 299 aaPredicted RBP9.62□□□□□ -0.87
PTPN6-201ENST00000318974 KHDC1LQ5JSQ8 128 aa9.62□□□□□ -0.87
PTPN6-201ENST00000318974 VGLL1Q99990 258 aa9.62□□□□□ -0.87
PTPN6-201ENST00000318974 TMEM70Q9BUB7 260 aa9.62□□□□□ -0.87
PTPN6-201ENST00000318974 SONP18583 2426 aaKnown RBP9.61□□□□□ -0.87
PTPN6-201ENST00000318974 K7EMT4 169 aa9.61□□□□□ -0.87
PTPN6-201ENST00000318974 M0QZ24 198 aa9.61□□□□□ -0.87
PTPN6-201ENST00000318974 C4orf3Q8WVX3 66 aa9.61□□□□□ -0.87
PTPN6-201ENST00000318974 WFDC12Q8WWY7 111 aa9.61□□□□□ -0.87
PTPN6-201ENST00000318974 TPPP3Q9BW30 176 aa9.61□□□□□ -0.87
PTPN6-201ENST00000318974 UQCR10Q9UDW1 63 aa9.61□□□□□ -0.87
PTPN6-201ENST00000318974 TLN2Q9Y4G6 2542 aa9.61□□□□□ -0.87
PTPN6-201ENST00000318974 HIVEP2P31629 2446 aa9.61□□□□□ -0.87
PTPN6-201ENST00000318974 C20orf202A1L168 122 aa9.6□□□□□ -0.87
PTPN6-201ENST00000318974 LEPROTL1O95214 131 aa9.6□□□□□ -0.87
PTPN6-201ENST00000318974 LYZL1Q6UWQ5 148 aa9.6□□□□□ -0.87
PTPN6-201ENST00000318974 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.6□□□□□ -0.87
PTPN6-201ENST00000318974 C18orf65Q6ZTR6 163 aa9.6□□□□□ -0.87
PTPN6-201ENST00000318974 DAZ1Q9NQZ3 744 aaKnown RBP9.6□□□□□ -0.87
PTPN6-201ENST00000318974 MXRA5Q9NR99 2828 aa9.6□□□□□ -0.87
PTPN6-201ENST00000318974 CYSRT1A8MQ03 144 aa9.6□□□□□ -0.87
PTPN6-201ENST00000318974 IGLC3P0DOY3 106 aa9.6□□□□□ -0.87
PTPN6-201ENST00000318974 HLA-DMBP28068 263 aa9.6□□□□□ -0.87
PTPN6-201ENST00000318974 IGFL4Q6B9Z1 124 aa9.6□□□□□ -0.87
PTPN6-201ENST00000318974 Q8TAT8 98 aa9.6□□□□□ -0.87
PTPN6-201ENST00000318974 UFC1Q9Y3C8 167 aa9.6□□□□□ -0.87
PTPN6-201ENST00000318974 IGHV7-4-1A0A0J9YVY3 117 aa9.59□□□□□ -0.87
PTPN6-201ENST00000318974 NPSP0C0P6 89 aa9.59□□□□□ -0.87
PTPN6-201ENST00000318974 TM4SF20Q53R12 229 aa9.59□□□□□ -0.87
PTPN6-201ENST00000318974 MRPL53Q96EL3 112 aaKnown RBP9.59□□□□□ -0.87
PTPN6-201ENST00000318974 CLEC5AQ9NY25 188 aa9.59□□□□□ -0.87
PTPN6-201ENST00000318974 TRAV9-2A0A087WT02 112 aa9.59□□□□□ -0.87
PTPN6-201ENST00000318974 TMSB15BA0A087X1C1 80 aa9.59□□□□□ -0.87
PTPN6-201ENST00000318974 CD28P10747 220 aa9.59□□□□□ -0.87
PTPN6-201ENST00000318974 HOXD3P31249 432 aaPredicted RBP9.59□□□□□ -0.87
PTPN6-201ENST00000318974 KLHL30-AS1Q8NEE0 82 aa9.59□□□□□ -0.87
PTPN6-201ENST00000318974 GLMPQ8WWB7 406 aa9.59□□□□□ -0.87
PTPN6-201ENST00000318974 FABP5P3A8MUU1 101 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms