RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 RELNP78509 3460 aa7.52□□□□□ -1.21
PTPRA-202ENST00000318266 IGHV3-66A0A0C4DH42 116 aa7.52□□□□□ -1.21
PTPRA-202ENST00000318266 HES1Q14469 280 aa7.52□□□□□ -1.21
PTPRA-202ENST00000318266 DTX2Q86UW9 622 aa7.52□□□□□ -1.21
PTPRA-202ENST00000318266 PRSS47A8MTI9 375 aa7.51□□□□□ -1.21
PTPRA-202ENST00000318266 SPRY2O43597 315 aa7.51□□□□□ -1.21
PTPRA-202ENST00000318266 APOMO95445 188 aa7.51□□□□□ -1.21
PTPRA-202ENST00000318266 TGFAP01135 160 aa7.51□□□□□ -1.21
PTPRA-202ENST00000318266 RNF182Q8N6D2 247 aa7.51□□□□□ -1.21
PTPRA-202ENST00000318266 DEFB104AQ8WTQ1 72 aa7.51□□□□□ -1.21
PTPRA-202ENST00000318266 BUB1B-PAK6H3BSN5 160 aa7.51□□□□□ -1.21
PTPRA-202ENST00000318266 TIMM23O14925 209 aa7.51□□□□□ -1.21
PTPRA-202ENST00000318266 IGLC6P0CF74 106 aa7.51□□□□□ -1.21
PTPRA-202ENST00000318266 ZNF418Q8TF45 676 aaPredicted RBP7.51□□□□□ -1.21
PTPRA-202ENST00000318266 ZMAT4Q9H898 229 aa7.51□□□□□ -1.21
PTPRA-202ENST00000318266 NXT2Q9NPJ8 142 aaKnown RBP7.51□□□□□ -1.21
PTPRA-202ENST00000318266 NBASA2RRP1 2371 aa7.51□□□□□ -1.21
PTPRA-202ENST00000318266 DCHS2Q6V1P9 2916 aa7.51□□□□□ -1.21
PTPRA-202ENST00000318266 SCGB1A1P11684 91 aa7.5□□□□□ -1.21
PTPRA-202ENST00000318266 SYT8Q8NBV8 401 aa7.5□□□□□ -1.21
PTPRA-202ENST00000318266 MYOZ3Q8TDC0 251 aa7.5□□□□□ -1.21
PTPRA-202ENST00000318266 GLMPQ8WWB7 406 aa7.5□□□□□ -1.21
PTPRA-202ENST00000318266 PTH2Q96A98 100 aa7.5□□□□□ -1.21
PTPRA-202ENST00000318266 SPATA25Q9BR10 227 aa7.5□□□□□ -1.21
PTPRA-202ENST00000318266 SMPXQ9UHP9 88 aa7.5□□□□□ -1.21
PTPRA-202ENST00000318266 LOC107984156A0A0G2JMH3 177 aa7.5□□□□□ -1.21
PTPRA-202ENST00000318266 PRAC2D3DTV9 90 aa7.5□□□□□ -1.21
PTPRA-202ENST00000318266 CRYBA4P53673 196 aa7.5□□□□□ -1.21
PTPRA-202ENST00000318266 SCGB2A2Q13296 93 aa7.5□□□□□ -1.21
PTPRA-202ENST00000318266 RRN3P1Q2M238 152 aa7.5□□□□□ -1.21
PTPRA-202ENST00000318266 Q6ZQT7 251 aa7.5□□□□□ -1.21
PTPRA-202ENST00000318266 ZNF575Q86XF7 245 aa7.5□□□□□ -1.21
PTPRA-202ENST00000318266 ARL17AQ8IVW1 177 aa7.5□□□□□ -1.21
PTPRA-202ENST00000318266 NCBP2LA6PVI3 153 aaKnown RBP7.5□□□□□ -1.21
PTPRA-202ENST00000318266 J3KRW8 73 aa7.5□□□□□ -1.21
PTPRA-202ENST00000318266 DYNAPQ8N1N2 210 aa7.5□□□□□ -1.21
PTPRA-202ENST00000318266 GEMIN7Q9H840 131 aaKnown RBP7.5□□□□□ -1.21
PTPRA-202ENST00000318266 PGPEP1Q9NXJ5 209 aa7.5□□□□□ -1.21
PTPRA-202ENST00000318266 SPTBN1Q01082 2364 aaKnown RBP7.49□□□□□ -1.21
PTPRA-202ENST00000318266 IGHV3-49A0A0A0MS15 119 aa7.49□□□□□ -1.21
PTPRA-202ENST00000318266 CEACAM4O75871 244 aa7.49□□□□□ -1.21
PTPRA-202ENST00000318266 ATP5LO75964 103 aa7.49□□□□□ -1.21
PTPRA-202ENST00000318266 IGLV1-47P01700 117 aa7.49□□□□□ -1.21
PTPRA-202ENST00000318266 IL17RELQ6ZVW7 336 aa7.49□□□□□ -1.21
PTPRA-202ENST00000318266 MRPL16Q9NX20 251 aaKnown RBP7.49□□□□□ -1.21
PTPRA-202ENST00000318266 CFHR4Q92496 578 aa7.49□□□□□ -1.21
PTPRA-202ENST00000318266 ONECUT1Q9UBC0 465 aa7.49□□□□□ -1.21
PTPRA-202ENST00000318266 FABP5P3A8MUU1 101 aa7.48□□□□□ -1.21
PTPRA-202ENST00000318266 K7ENP7 123 aa7.48□□□□□ -1.21
PTPRA-202ENST00000318266 LINC01548A6NM66 108 aa7.48□□□□□ -1.21
PTPRA-202ENST00000318266 PSMB2P49721 201 aa7.48□□□□□ -1.21
PTPRA-202ENST00000318266 PDE6HQ13956 83 aa7.48□□□□□ -1.21
PTPRA-202ENST00000318266 C8orf31Q8N9H6 132 aa7.48□□□□□ -1.21
PTPRA-202ENST00000318266 PRO0461Q9UI25 63 aa7.48□□□□□ -1.21
PTPRA-202ENST00000318266 ANKRD11Q6UB99 2663 aaPredicted RBP7.48□□□□□ -1.21
PTPRA-202ENST00000318266 OR11H12B2RN74 326 aa7.48□□□□□ -1.21
PTPRA-202ENST00000318266 MT-ATP8P03928 68 aa7.48□□□□□ -1.21
PTPRA-202ENST00000318266 SPINK8P0C7L1 97 aa7.48□□□□□ -1.21
PTPRA-202ENST00000318266 RPL7P18124 248 aaKnown RBP7.48□□□□□ -1.21
PTPRA-202ENST00000318266 Q8N8P6 123 aa7.48□□□□□ -1.21
PTPRA-202ENST00000318266 OR11H1Q8NG94 326 aa7.48□□□□□ -1.21
PTPRA-202ENST00000318266 OR11H2Q8NH07 326 aa7.48□□□□□ -1.21
PTPRA-202ENST00000318266 PIFOQ8TCI5 191 aa7.48□□□□□ -1.21
PTPRA-202ENST00000318266 IGHG4P01861 327 aa7.47□□□□□ -1.21
PTPRA-202ENST00000318266 MFAP4P55083 255 aa7.47□□□□□ -1.21
PTPRA-202ENST00000318266 LAGE3Q14657 143 aa7.47□□□□□ -1.21
PTPRA-202ENST00000318266 RNASE6Q93091 150 aaKnown RBP7.47□□□□□ -1.21
PTPRA-202ENST00000318266 SMAD5-AS1Q9Y6J3 95 aa7.47□□□□□ -1.21
PTPRA-202ENST00000318266 IGF2RP11717 2491 aa7.47□□□□□ -1.21
PTPRA-202ENST00000318266 LINC01549A6NIU2 74 aa7.47□□□□□ -1.21
PTPRA-202ENST00000318266 HLA-DRB4P13762 266 aa7.47□□□□□ -1.21
PTPRA-202ENST00000318266 SCGB1D4Q6XE38 83 aa7.47□□□□□ -1.21
PTPRA-202ENST00000318266 ZFP2Q6ZN57 461 aa7.47□□□□□ -1.21
PTPRA-202ENST00000318266 NFE4Q86UQ8 179 aa7.47□□□□□ -1.21
PTPRA-202ENST00000318266 NUP37Q8NFH4 326 aa7.47□□□□□ -1.21
PTPRA-202ENST00000318266 VKORC1Q9BQB6 163 aa7.47□□□□□ -1.21
PTPRA-202ENST00000318266 C11orf21Q9P2W6 132 aa7.47□□□□□ -1.21
PTPRA-202ENST00000318266 HLA-DRB4X5D2U9 266 aa7.47□□□□□ -1.21
PTPRA-202ENST00000318266 SHISA9B4DS77 424 aa7.46□□□□□ -1.21
PTPRA-202ENST00000318266 HOXA3O43365 443 aaPredicted RBP7.46□□□□□ -1.21
PTPRA-202ENST00000318266 KLRD1Q13241 179 aa7.46□□□□□ -1.21
PTPRA-202ENST00000318266 MORN3Q6PF18 240 aaPredicted RBP7.46□□□□□ -1.21
PTPRA-202ENST00000318266 MRAP2Q96G30 205 aa7.46□□□□□ -1.21
PTPRA-202ENST00000318266 FANCD2OSQ96PS1 177 aa7.46□□□□□ -1.21
PTPRA-202ENST00000318266 C21orf62Q9NYP8 219 aa7.46□□□□□ -1.21
PTPRA-202ENST00000318266 A0A087WX48 190 aa7.46□□□□□ -1.22
PTPRA-202ENST00000318266 IGKV3D-20A0A0C4DH25 116 aa7.46□□□□□ -1.22
PTPRA-202ENST00000318266 TNFRSF13BO14836 293 aaPredicted RBP7.46□□□□□ -1.22
PTPRA-202ENST00000318266 EMP1P54849 157 aa7.46□□□□□ -1.22
PTPRA-202ENST00000318266 FOXI1Q12951 378 aa7.46□□□□□ -1.22
PTPRA-202ENST00000318266 SRSF9Q13242 221 aaKnown RBP eCLIP7.46□□□□□ -1.22
PTPRA-202ENST00000318266 FHL3Q13643 280 aa7.46□□□□□ -1.22
PTPRA-202ENST00000318266 KRTAP21-3Q3LHN1 58 aa7.46□□□□□ -1.22
PTPRA-202ENST00000318266 SPANXN1Q5VSR9 72 aa7.46□□□□□ -1.22
PTPRA-202ENST00000318266 ZNF502Q8TBZ5 544 aa7.46□□□□□ -1.22
PTPRA-202ENST00000318266 CHD8Q9HCK8 2581 aa7.46□□□□□ -1.22
PTPRA-202ENST00000318266 IGLV2-18A0A075B6J9 118 aa7.46□□□□□ -1.22
PTPRA-202ENST00000318266 TRBV7-3A0A075B6L6 115 aa7.46□□□□□ -1.22
PTPRA-202ENST00000318266 F8W735 103 aaPredicted RBP7.46□□□□□ -1.22
PTPRA-202ENST00000318266 H3BVH4 76 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms