RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 ZNF493Q6ZR52 646 aa15.11■□□□□ 0.01
ZNF554-201ENST00000317243 VMO1Q7Z5L0 202 aa15.11■□□□□ 0.01
ZNF554-201ENST00000317243 SPATA25Q9BR10 227 aa15.11■□□□□ 0.01
ZNF554-201ENST00000317243 ABCA2Q9BZC7 2435 aa15.11■□□□□ 0.01
ZNF554-201ENST00000317243 NCBP2LA6PVI3 153 aaKnown RBP15.1■□□□□ 0.01
ZNF554-201ENST00000317243 SHANK2-AS3Q9BTD1 123 aa15.1■□□□□ 0.01
ZNF554-201ENST00000317243 IGHV3-35A0A0C4DH35 117 aa15.1■□□□□ 0.01
ZNF554-201ENST00000317243 F8W1H4 67 aa15.1■□□□□ 0.01
ZNF554-201ENST00000317243 NBR2O15453 112 aa15.1■□□□□ 0.01
ZNF554-201ENST00000317243 UCNP55089 124 aa15.1■□□□□ 0.01
ZNF554-201ENST00000317243 TIMD4Q96H15 378 aa15.1■□□□□ 0.01
ZNF554-201ENST00000317243 U3KQK5 164 aa15.1■□□□□ 0.01
ZNF554-201ENST00000317243 TRBV25-1A0A075B6N4 114 aa15.09■□□□□ 0.01
ZNF554-201ENST00000317243 CKS2P33552 79 aa15.09■□□□□ 0.01
ZNF554-201ENST00000317243 GTSCR1Q86UQ5 136 aa15.09■□□□□ 0.01
ZNF554-201ENST00000317243 HHLA3Q9XRX5 114 aa15.09■□□□□ 0.01
ZNF554-201ENST00000317243 RNF125Q96EQ8 232 aa15.08■□□□□ 0.01
ZNF554-201ENST00000317243 IGLL5B9A064 214 aa15.08■□□□□ 0
ZNF554-201ENST00000317243 E9PLD3 99 aa15.08■□□□□ 0
ZNF554-201ENST00000317243 CRYBA4P53673 196 aa15.08■□□□□ 0
ZNF554-201ENST00000317243 ZNF562Q6V9R5 426 aa15.08■□□□□ 0
ZNF554-201ENST00000317243 OR11H6Q8NGC7 330 aa15.08■□□□□ 0
ZNF554-201ENST00000317243 MYO18BQ8IUG5 2567 aa15.08■□□□□ 0
ZNF554-201ENST00000317243 ZANQ9Y493 2812 aa15.08■□□□□ 0
ZNF554-201ENST00000317243 ZNF491Q8N8L2 437 aa15.08■□□□□ 0
ZNF554-201ENST00000317243 ZNF479Q96JC4 524 aa15.08■□□□□ 0
ZNF554-201ENST00000317243 H3BRN7 92 aa15.07■□□□□ 0
ZNF554-201ENST00000317243 CEND1Q8N111 149 aa15.07■□□□□ 0
ZNF554-201ENST00000317243 HIGD1BQ9P298 99 aa15.07■□□□□ 0
ZNF554-201ENST00000317243 ODF3BA8MYP8 253 aa15.07■□□□□ 0
ZNF554-201ENST00000317243 PRSS1P07477 247 aa15.07■□□□□ 0
ZNF554-201ENST00000317243 Q6AWC8 147 aa15.07■□□□□ 0
ZNF554-201ENST00000317243 ACACBO00763 2458 aa15.06■□□□□ 0
ZNF554-201ENST00000317243 IGKV2-40A0A087WW87 121 aaPredicted RBP15.06■□□□□ 0
ZNF554-201ENST00000317243 IGKV2D-40P01614 121 aaPredicted RBP15.06■□□□□ 0
ZNF554-201ENST00000317243 PRTN3P24158 256 aa15.06■□□□□ 0
ZNF554-201ENST00000317243 ODF1Q14990 250 aa15.06■□□□□ 0
ZNF554-201ENST00000317243 AAMDCQ9H7C9 122 aa15.06■□□□□ 0
ZNF554-201ENST00000317243 CACNA1AO00555 2505 aa15.05■□□□□ 0
ZNF554-201ENST00000317243 SH2D1AO60880 128 aa15.05■□□□□ 0
ZNF554-201ENST00000317243 POLQO75417 2590 aa15.05■□□□□ -0
ZNF554-201ENST00000317243 AGRNO00468 2067 aa15.05■□□□□ -0
ZNF554-201ENST00000317243 GAS8-AS1O95177 125 aa15.05■□□□□ -0
ZNF554-201ENST00000317243 TWIST1Q15672 202 aa15.05■□□□□ -0
ZNF554-201ENST00000317243 C5orf64Q2M2E5 130 aa15.05■□□□□ -0
ZNF554-201ENST00000317243 IGFL4Q6B9Z1 124 aa15.05■□□□□ -0
ZNF554-201ENST00000317243 FANCD2OSQ96PS1 177 aa15.05■□□□□ -0
ZNF554-201ENST00000317243 TM2D2Q9BX73 214 aa15.05■□□□□ -0
ZNF554-201ENST00000317243 TRBV6-1A0A0K0K1D8 114 aa15.04■□□□□ -0
ZNF554-201ENST00000317243 GNLYP22749 145 aa15.04■□□□□ -0
ZNF554-201ENST00000317243 Q8TAT8 98 aa15.04■□□□□ -0
ZNF554-201ENST00000317243 IGHV3OR16-10A0A075B7F0 116 aa15.04■□□□□ -0
ZNF554-201ENST00000317243 PPIFP30405 207 aaKnown RBP15.04■□□□□ -0
ZNF554-201ENST00000317243 LEPP41159 167 aa15.04■□□□□ -0
ZNF554-201ENST00000317243 ZC2HC1BQ5TFG8 222 aa15.04■□□□□ -0
ZNF554-201ENST00000317243 GAGE13Q4V321 117 aa15.03■□□□□ -0
ZNF554-201ENST00000317243 C20orf78Q9BR46 151 aa15.03■□□□□ -0
ZNF554-201ENST00000317243 NPIPB5A8MRT5 1133 aa15.03■□□□□ -0
ZNF554-201ENST00000317243 GEMIN7Q9H840 131 aaKnown RBP15.03■□□□□ -0
ZNF554-201ENST00000317243 F8W735 103 aaPredicted RBP15.02■□□□□ -0
ZNF554-201ENST00000317243 IGKCP01834 107 aa15.02■□□□□ -0
ZNF554-201ENST00000317243 BPESC1Q9GZL8 116 aa15.02■□□□□ -0
ZNF554-201ENST00000317243 NDUFA3O95167 84 aa15.02□□□□□ -0.01
ZNF554-201ENST00000317243 FCER1GP30273 86 aa15.02□□□□□ -0.01
ZNF554-201ENST00000317243 C12orf74Q32Q52 190 aa15.02□□□□□ -0.01
ZNF554-201ENST00000317243 LYPD1Q8N2G4 141 aa15.02□□□□□ -0.01
ZNF554-201ENST00000317243 MAPKAPK5-AS1Q8N8E1 139 aa15.02□□□□□ -0.01
ZNF554-201ENST00000317243 FOXC2Q99958 501 aa15.02□□□□□ -0.01
ZNF554-201ENST00000317243 MRPS12O15235 138 aaKnown RBP15.01□□□□□ -0.01
ZNF554-201ENST00000317243 TCTEX1D4Q5JR98 221 aa15.01□□□□□ -0.01
ZNF554-201ENST00000317243 LCNL1Q6ZST4 164 aa15.01□□□□□ -0.01
ZNF554-201ENST00000317243 PIFOQ8TCI5 191 aa15.01□□□□□ -0.01
ZNF554-201ENST00000317243 MRAP2Q96G30 205 aa15.01□□□□□ -0.01
ZNF554-201ENST00000317243 ZMAT4Q9H898 229 aa15.01□□□□□ -0.01
ZNF554-201ENST00000317243 LINC01548A6NM66 108 aa15.01□□□□□ -0.01
ZNF554-201ENST00000317243 EGR2P11161 476 aaPredicted RBP15.01□□□□□ -0.01
ZNF554-201ENST00000317243 DTX2Q86UW9 622 aa15.01□□□□□ -0.01
ZNF554-201ENST00000317243 TMEM160Q9NX00 188 aa15.01□□□□□ -0.01
ZNF554-201ENST00000317243 MSRB1Q9NZV6 116 aa15.01□□□□□ -0.01
ZNF554-201ENST00000317243 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15□□□□□ -0.01
ZNF554-201ENST00000317243 TMEM8BA6NDV4 472 aa15□□□□□ -0.01
ZNF554-201ENST00000317243 EVI2AP22794 236 aa15□□□□□ -0.01
ZNF554-201ENST00000317243 NPBQ8NG41 125 aa15□□□□□ -0.01
ZNF554-201ENST00000317243 A0A1B0GWB2 263 aa15□□□□□ -0.01
ZNF554-201ENST00000317243 M0R1W7 72 aa15□□□□□ -0.01
ZNF554-201ENST00000317243 ITLN2Q8WWU7 325 aaPredicted RBP15□□□□□ -0.01
ZNF554-201ENST00000317243 PRO0461Q9UI25 63 aa15□□□□□ -0.01
ZNF554-201ENST00000317243 TRAV40A0A0B4J280 105 aa14.99□□□□□ -0.01
ZNF554-201ENST00000317243 HLA-DMBP28068 263 aa14.99□□□□□ -0.01
ZNF554-201ENST00000317243 ZNF80P51504 273 aaPredicted RBP14.99□□□□□ -0.01
ZNF554-201ENST00000317243 AJUBAQ96IF1 538 aa14.99□□□□□ -0.01
ZNF554-201ENST00000317243 RNF5Q99942 180 aa14.98□□□□□ -0.01
ZNF554-201ENST00000317243 SIRPDQ9H106 197 aa14.98□□□□□ -0.01
ZNF554-201ENST00000317243 MAP1LC3AQ9H492 121 aa14.98□□□□□ -0.01
ZNF554-201ENST00000317243 CSPG4Q6UVK1 2322 aa14.98□□□□□ -0.01
ZNF554-201ENST00000317243 IGLV11-55A0A075B6I3 123 aa14.97□□□□□ -0.01
ZNF554-201ENST00000317243 ORM1P02763 201 aa14.97□□□□□ -0.01
ZNF554-201ENST00000317243 GATA1P15976 413 aaPredicted RBP14.97□□□□□ -0.01
ZNF554-201ENST00000317243 PRR25Q96S07 402 aa14.97□□□□□ -0.01
ZNF554-201ENST00000317243 HIST1H4GQ99525 98 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms