RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 VMO1Q7Z5L0 202 aa7.06□□□□□ -1.28
USF3-201ENST00000316407 PRR19A6NJB7 356 aa7.06□□□□□ -1.28
USF3-201ENST00000316407 CD177Q8N6Q3 437 aa7.06□□□□□ -1.28
USF3-201ENST00000316407 NKAPP1Q8N9T2 125 aa7.06□□□□□ -1.28
USF3-201ENST00000316407 C14orf132Q9NPU4 83 aa7.06□□□□□ -1.28
USF3-201ENST00000316407 PSCAO43653 123 aa7.06□□□□□ -1.28
USF3-201ENST00000316407 HERV-K104P63124 156 aa7.06□□□□□ -1.28
USF3-201ENST00000316407 PKIGQ9Y2B9 76 aa7.06□□□□□ -1.28
USF3-201ENST00000316407 BAALC-AS2P0C853 105 aa7.06□□□□□ -1.28
USF3-201ENST00000316407 J3QQQ9 107 aa7.06□□□□□ -1.28
USF3-201ENST00000316407 C17orf100A8MU93 164 aa7.06□□□□□ -1.28
USF3-201ENST00000316407 Q8N8P6 123 aa7.06□□□□□ -1.28
USF3-201ENST00000316407 PRSS46E5RG02 174 aa7.06□□□□□ -1.28
USF3-201ENST00000316407 ZNF726P1Q15940 193 aa7.06□□□□□ -1.28
USF3-201ENST00000316407 SRSF7Q16629 238 aaKnown RBP eCLIP7.06□□□□□ -1.28
USF3-201ENST00000316407 CR1LQ2VPA4 569 aa7.05□□□□□ -1.28
USF3-201ENST00000316407 CFHR4Q92496 578 aa7.05□□□□□ -1.28
USF3-201ENST00000316407 PFN1P07737 140 aaKnown RBP7.05□□□□□ -1.28
USF3-201ENST00000316407 THSD7AQ9UPZ6 1657 aa7.05□□□□□ -1.28
USF3-201ENST00000316407 SDHAF1A6NFY7 115 aa7.05□□□□□ -1.28
USF3-201ENST00000316407 K7EN84 100 aa7.05□□□□□ -1.28
USF3-201ENST00000316407 IGHV1-3A0A0C4DH29 117 aa7.05□□□□□ -1.28
USF3-201ENST00000316407 IGLC7A0M8Q6 106 aa7.05□□□□□ -1.28
USF3-201ENST00000316407 DAND5Q8N907 189 aa7.05□□□□□ -1.28
USF3-201ENST00000316407 J3QW42 95 aa7.05□□□□□ -1.28
USF3-201ENST00000316407 TMEM141Q96I45 108 aa7.04□□□□□ -1.28
USF3-201ENST00000316407 SPINK13Q1W4C9 94 aa7.04□□□□□ -1.28
USF3-201ENST00000316407 UBE2DNLQ8IWF7 75 aa7.04□□□□□ -1.28
USF3-201ENST00000316407 FOXI2Q6ZQN5 318 aa7.04□□□□□ -1.28
USF3-201ENST00000316407 KLF5Q13887 457 aaPredicted RBP7.04□□□□□ -1.28
USF3-201ENST00000316407 MYO18BQ8IUG5 2567 aa7.04□□□□□ -1.28
USF3-201ENST00000316407 NPYP01303 97 aa7.04□□□□□ -1.28
USF3-201ENST00000316407 C8orf86Q6ZUL3 223 aa7.04□□□□□ -1.28
USF3-201ENST00000316407 C9orf106Q8NAJ2 232 aa7.04□□□□□ -1.28
USF3-201ENST00000316407 U3KQE9 123 aa7.04□□□□□ -1.28
USF3-201ENST00000316407 IGHV1OR15-1A0A075B7D0 117 aa7.04□□□□□ -1.28
USF3-201ENST00000316407 KIR2DL5BA0A0G2JN68 375 aa7.04□□□□□ -1.28
USF3-201ENST00000316407 KIR2DL5BA0A0G2JPC4 375 aa7.04□□□□□ -1.28
USF3-201ENST00000316407 LYPD6Q86Y78 171 aa7.04□□□□□ -1.28
USF3-201ENST00000316407 KIR2DL5AQ8N109 375 aa7.04□□□□□ -1.28
USF3-201ENST00000316407 SAP25Q8TEE9 199 aa7.04□□□□□ -1.28
USF3-201ENST00000316407 RHODO00212 210 aa7.04□□□□□ -1.28
USF3-201ENST00000316407 FAM166AQ6J272 317 aa7.04□□□□□ -1.28
USF3-201ENST00000316407 LINC00173Q6ZV60 143 aa7.03□□□□□ -1.28
USF3-201ENST00000316407 ORMDL1Q9P0S3 153 aa7.03□□□□□ -1.28
USF3-201ENST00000316407 SRSF2Q01130 221 aaKnown RBP7.03□□□□□ -1.28
USF3-201ENST00000316407 IGHV1-18A0A0C4DH31 117 aa7.03□□□□□ -1.28
USF3-201ENST00000316407 CFHR1Q03591 330 aa7.03□□□□□ -1.28
USF3-201ENST00000316407 ZNF561-AS1K7EIQ3 104 aa7.03□□□□□ -1.28
USF3-201ENST00000316407 DOPEY1Q5JWR5 2465 aa7.03□□□□□ -1.28
USF3-201ENST00000316407 LGALS9BQ3B8N2 356 aa7.03□□□□□ -1.28
USF3-201ENST00000316407 LGALS9CQ6DKI2 356 aa7.03□□□□□ -1.28
USF3-201ENST00000316407 RNF183Q96D59 192 aa7.03□□□□□ -1.28
USF3-201ENST00000316407 CRYGBP07316 175 aa7.03□□□□□ -1.28
USF3-201ENST00000316407 SHANK2-AS3Q9BTD1 123 aa7.03□□□□□ -1.28
USF3-201ENST00000316407 IGHV1-8P0DP01 117 aa7.02□□□□□ -1.28
USF3-201ENST00000316407 BRD3OSQ6XYD6 125 aa7.02□□□□□ -1.28
USF3-201ENST00000316407 TEN1Q86WV5 123 aa7.02□□□□□ -1.29
USF3-201ENST00000316407 DEFB125Q8N687 156 aa7.02□□□□□ -1.29
USF3-201ENST00000316407 NUPR1O60356 82 aa7.02□□□□□ -1.29
USF3-201ENST00000316407 POU2AF1Q16633 256 aa7.02□□□□□ -1.29
USF3-201ENST00000316407 DTX1Q86Y01 620 aa7.02□□□□□ -1.29
USF3-201ENST00000316407 TRBV7-1A0A0A6YYK4 115 aa7.02□□□□□ -1.29
USF3-201ENST00000316407 G3V4G9 280 aa7.02□□□□□ -1.29
USF3-201ENST00000316407 SPACA3Q8IXA5 215 aa7.02□□□□□ -1.29
USF3-201ENST00000316407 F8VRH5 84 aa7.02□□□□□ -1.29
USF3-201ENST00000316407 XCL2Q9UBD3 114 aa7.02□□□□□ -1.29
USF3-201ENST00000316407 CHKB-CPT1BH3BT56 60 aa7.02□□□□□ -1.29
USF3-201ENST00000316407 IGHV1-46P01743 117 aa7.01□□□□□ -1.29
USF3-201ENST00000316407 IFI6P09912 130 aa7.01□□□□□ -1.29
USF3-201ENST00000316407 CLEC2BQ92478 149 aa7.01□□□□□ -1.29
USF3-201ENST00000316407 MLST8Q9BVC4 326 aa7.01□□□□□ -1.29
USF3-201ENST00000316407 TRBV25-1A0A075B6N4 114 aa7.01□□□□□ -1.29
USF3-201ENST00000316407 A0A096LPF7 62 aa7.01□□□□□ -1.29
USF3-201ENST00000316407 TEX36Q5VZQ5 186 aa7.01□□□□□ -1.29
USF3-201ENST00000316407 F6UB75 175 aa7.01□□□□□ -1.29
USF3-201ENST00000316407 SPRR3Q9UBC9 169 aa7.01□□□□□ -1.29
USF3-201ENST00000316407 SIGLEC9Q9Y336 463 aa7.01□□□□□ -1.29
USF3-201ENST00000316407 CRYGSP22914 178 aa7.01□□□□□ -1.29
USF3-201ENST00000316407 FXYD2P54710 66 aa7.01□□□□□ -1.29
USF3-201ENST00000316407 ICOSQ9Y6W8 199 aa7.01□□□□□ -1.29
USF3-201ENST00000316407 E9PLN8 166 aa7.01□□□□□ -1.29
USF3-201ENST00000316407 SPRY2O43597 315 aa7.01□□□□□ -1.29
USF3-201ENST00000316407 PSMB8P28062 276 aa7.01□□□□□ -1.29
USF3-201ENST00000316407 TMEM14BQ9NUH8 114 aa7.01□□□□□ -1.29
USF3-201ENST00000316407 DSCAMO60469 2012 aa7.01□□□□□ -1.29
USF3-201ENST00000316407 ATOX1O00244 68 aa7.01□□□□□ -1.29
USF3-201ENST00000316407 ACYP1P07311 99 aa7.01□□□□□ -1.29
USF3-201ENST00000316407 C8orf31Q8N9H6 132 aa7.01□□□□□ -1.29
USF3-201ENST00000316407 LYPD1Q8N2G4 141 aa7.01□□□□□ -1.29
USF3-201ENST00000316407 TRAV13-2A0A0B4J235 113 aa7□□□□□ -1.29
USF3-201ENST00000316407 NTN3O00634 580 aaPredicted RBP7□□□□□ -1.29
USF3-201ENST00000316407 ARTNQ5T4W7 220 aa7□□□□□ -1.29
USF3-201ENST00000316407 SP9P0CG40 484 aa7□□□□□ -1.29
USF3-201ENST00000316407 IGLL5B9A064 214 aa7□□□□□ -1.29
USF3-201ENST00000316407 IGLC1P0CG04 106 aa7□□□□□ -1.29
USF3-201ENST00000316407 BUB1B-PAK6H3BSN5 160 aa7□□□□□ -1.29
USF3-201ENST00000316407 LTAP01374 205 aa7□□□□□ -1.29
USF3-201ENST00000316407 XCL1P47992 114 aa7□□□□□ -1.29
USF3-201ENST00000316407 TEX49A0A1B0GTD5 131 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms