RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 HIST1H1AQ02539 215 aaPredicted RBP12.58□□□□□ -0.4
CLCF1-201ENST00000312438 RAX2Q96IS3 184 aa12.58□□□□□ -0.4
CLCF1-201ENST00000312438 TRBV7-9A0A0J9YWB2 115 aa12.58□□□□□ -0.4
CLCF1-201ENST00000312438 TFPI2P48307 235 aa12.58□□□□□ -0.4
CLCF1-201ENST00000312438 COA6Q5JTJ3 125 aaKnown RBP12.58□□□□□ -0.4
CLCF1-201ENST00000312438 HIST2H2BDQ6DRA6 164 aa12.58□□□□□ -0.4
CLCF1-201ENST00000312438 F6UB75 175 aa12.57□□□□□ -0.4
CLCF1-201ENST00000312438 CCL24O00175 119 aa12.57□□□□□ -0.4
CLCF1-201ENST00000312438 APCSP02743 223 aa12.57□□□□□ -0.4
CLCF1-201ENST00000312438 ORM1P02763 201 aa12.57□□□□□ -0.4
CLCF1-201ENST00000312438 CSN3P07498 182 aa12.57□□□□□ -0.4
CLCF1-201ENST00000312438 CAMPP49913 170 aa12.57□□□□□ -0.4
CLCF1-201ENST00000312438 FHL3Q13643 280 aa12.57□□□□□ -0.4
CLCF1-201ENST00000312438 TMSB15BA0A087X1C1 80 aa12.56□□□□□ -0.4
CLCF1-201ENST00000312438 A0A1B0GUT8 65 aa12.56□□□□□ -0.4
CLCF1-201ENST00000312438 A0A1W2PRX2 142 aa12.56□□□□□ -0.4
CLCF1-201ENST00000312438 AKR1D1P51857 326 aa12.56□□□□□ -0.4
CLCF1-201ENST00000312438 PROK1P58294 105 aa12.56□□□□□ -0.4
CLCF1-201ENST00000312438 LINC01559Q495D7 138 aa12.56□□□□□ -0.4
CLCF1-201ENST00000312438 GDF5OSQ5U4N7 250 aa12.56□□□□□ -0.4
CLCF1-201ENST00000312438 DEFB1P60022 68 aa12.55□□□□□ -0.4
CLCF1-201ENST00000312438 RIGQ13278 110 aa12.55□□□□□ -0.4
CLCF1-201ENST00000312438 BORCS7Q96B45 105 aa12.55□□□□□ -0.4
CLCF1-201ENST00000312438 FAM19A4Q96LR4 140 aa12.55□□□□□ -0.4
CLCF1-201ENST00000312438 CRLF1O75462 422 aa12.55□□□□□ -0.4
CLCF1-201ENST00000312438 ZNF688P0C7X2 276 aa12.55□□□□□ -0.4
CLCF1-201ENST00000312438 PSMG4Q5JS54 123 aa12.55□□□□□ -0.4
CLCF1-201ENST00000312438 OTOGQ6ZRI0 2925 aa12.54□□□□□ -0.4
CLCF1-201ENST00000312438 A0A1B0GW15 77 aa12.54□□□□□ -0.4
CLCF1-201ENST00000312438 CRISP2P16562 243 aa12.54□□□□□ -0.4
CLCF1-201ENST00000312438 GFI1BQ5VTD9 330 aa12.54□□□□□ -0.4
CLCF1-201ENST00000312438 ZNF575Q86XF7 245 aa12.54□□□□□ -0.4
CLCF1-201ENST00000312438 ZFAND2AQ8N6M9 145 aa12.54□□□□□ -0.4
CLCF1-201ENST00000312438 TPPP3Q9BW30 176 aa12.54□□□□□ -0.4
CLCF1-201ENST00000312438 TRAV2A0A0B4J234 112 aa12.53□□□□□ -0.4
CLCF1-201ENST00000312438 S100A8P05109 93 aa12.53□□□□□ -0.4
CLCF1-201ENST00000312438 KIAA1644Q3SXP7 199 aa12.53□□□□□ -0.4
CLCF1-201ENST00000312438 LYZL1Q6UWQ5 148 aa12.53□□□□□ -0.4
CLCF1-201ENST00000312438 HIST3H2BBQ8N257 126 aa12.53□□□□□ -0.4
CLCF1-201ENST00000312438 ANK3Q12955 4377 aaKnown RBP12.53□□□□□ -0.4
CLCF1-201ENST00000312438 GPX1P07203 203 aa12.53□□□□□ -0.4
CLCF1-201ENST00000312438 ARMS2P0C7Q2 107 aa12.53□□□□□ -0.4
CLCF1-201ENST00000312438 SLAQ13239 276 aa12.53□□□□□ -0.4
CLCF1-201ENST00000312438 DEFB114Q30KQ6 69 aa12.53□□□□□ -0.4
CLCF1-201ENST00000312438 FER1L6-AS1Q8NA97 138 aa12.53□□□□□ -0.4
CLCF1-201ENST00000312438 DYNLRB2Q8TF09 96 aa12.53□□□□□ -0.4
CLCF1-201ENST00000312438 MTORP42345 2549 aa12.52□□□□□ -0.41
CLCF1-201ENST00000312438 TRAV21A0A0B4J279 112 aa12.52□□□□□ -0.41
CLCF1-201ENST00000312438 IGKV3D-20A0A0C4DH25 116 aa12.52□□□□□ -0.41
CLCF1-201ENST00000312438 IGLC6P0CF74 106 aa12.52□□□□□ -0.41
CLCF1-201ENST00000312438 EBLN2Q6P2I7 272 aa12.52□□□□□ -0.41
CLCF1-201ENST00000312438 APRG1Q8IVJ8 170 aa12.52□□□□□ -0.41
CLCF1-201ENST00000312438 SSBP4Q9BWG4 385 aaPredicted RBP12.52□□□□□ -0.41
CLCF1-201ENST00000312438 A0A0J9YX75 114 aa12.51□□□□□ -0.41
CLCF1-201ENST00000312438 GRIFINA4D1Z8 144 aa12.51□□□□□ -0.41
CLCF1-201ENST00000312438 S100A2P29034 98 aa12.51□□□□□ -0.41
CLCF1-201ENST00000312438 Q0VG73 95 aa12.51□□□□□ -0.41
CLCF1-201ENST00000312438 PRR9Q5T870 116 aa12.51□□□□□ -0.41
CLCF1-201ENST00000312438 IFITM10A6NMD0 228 aa12.51□□□□□ -0.41
CLCF1-201ENST00000312438 F2Z2F3 143 aa12.51□□□□□ -0.41
CLCF1-201ENST00000312438 TMEM61Q8N0U2 210 aa12.51□□□□□ -0.41
CLCF1-201ENST00000312438 SIGLEC8Q9NYZ4 499 aa12.51□□□□□ -0.41
CLCF1-201ENST00000312438 C11orf21Q9P2W6 132 aa12.51□□□□□ -0.41
CLCF1-201ENST00000312438 J3KRW8 73 aa12.5□□□□□ -0.41
CLCF1-201ENST00000312438 DUSP14O95147 198 aaKnown RBP12.5□□□□□ -0.41
CLCF1-201ENST00000312438 CD33P20138 364 aa12.5□□□□□ -0.41
CLCF1-201ENST00000312438 CTRLP40313 264 aa12.5□□□□□ -0.41
CLCF1-201ENST00000312438 PDZD11Q5EBL8 140 aa12.5□□□□□ -0.41
CLCF1-201ENST00000312438 GATD1Q8NB37 220 aa12.5□□□□□ -0.41
CLCF1-201ENST00000312438 ODF3Q96PU9 254 aa12.5□□□□□ -0.41
CLCF1-201ENST00000312438 A0A1B0GUS0 222 aa12.49□□□□□ -0.41
CLCF1-201ENST00000312438 SRIP30626 198 aa12.49□□□□□ -0.41
CLCF1-201ENST00000312438 RNASE4P34096 147 aaKnown RBP12.49□□□□□ -0.41
CLCF1-201ENST00000312438 OR10J3Q5JRS4 329 aa12.49□□□□□ -0.41
CLCF1-201ENST00000312438 FOXI2Q6ZQN5 318 aa12.49□□□□□ -0.41
CLCF1-201ENST00000312438 TRAV25A0A0B4J276 109 aa12.48□□□□□ -0.41
CLCF1-201ENST00000312438 KLLNB2CW77 178 aa12.48□□□□□ -0.41
CLCF1-201ENST00000312438 CD300EQ496F6 205 aaPredicted RBP12.48□□□□□ -0.41
CLCF1-201ENST00000312438 ADARB2-AS1A8MUL3 147 aa12.48□□□□□ -0.41
CLCF1-201ENST00000312438 LEPP41159 167 aa12.48□□□□□ -0.41
CLCF1-201ENST00000312438 Q6ZQT7 251 aa12.48□□□□□ -0.41
CLCF1-201ENST00000312438 ZNF493Q6ZR52 646 aa12.48□□□□□ -0.41
CLCF1-201ENST00000312438 BAGE3Q86Y29 109 aa12.48□□□□□ -0.41
CLCF1-201ENST00000312438 CNFNQ9BYD5 112 aa12.48□□□□□ -0.41
CLCF1-201ENST00000312438 TMEM256Q8N2U0 113 aa12.47□□□□□ -0.41
CLCF1-201ENST00000312438 SPAG8Q99932 426 aaPredicted RBP12.47□□□□□ -0.41
CLCF1-201ENST00000312438 ALKBH7Q9BT30 221 aaPredicted RBP12.47□□□□□ -0.41
CLCF1-201ENST00000312438 OR4C46A6NHA9 309 aa12.46□□□□□ -0.41
CLCF1-201ENST00000312438 FABP4P15090 132 aa12.46□□□□□ -0.41
CLCF1-201ENST00000312438 NTF3P20783 257 aa12.46□□□□□ -0.41
CLCF1-201ENST00000312438 NSUN5P1Q3KNT7 163 aa12.46□□□□□ -0.41
CLCF1-201ENST00000312438 NDUFA11Q86Y39 141 aa12.46□□□□□ -0.41
CLCF1-201ENST00000312438 HIST1H2BLQ99880 126 aa12.46□□□□□ -0.41
CLCF1-201ENST00000312438 TP53TG3Q9ULZ0 132 aa12.46□□□□□ -0.41
CLCF1-201ENST00000312438 TSPOP30536 169 aa12.46□□□□□ -0.42
CLCF1-201ENST00000312438 DEFB131AP59861 70 aa12.46□□□□□ -0.42
CLCF1-201ENST00000312438 SSTP61278 116 aa12.46□□□□□ -0.42
CLCF1-201ENST00000312438 KIR3DS1Q14943 382 aa12.46□□□□□ -0.42
CLCF1-201ENST00000312438 TWIST1Q15672 202 aa12.46□□□□□ -0.42
CLCF1-201ENST00000312438 LOC102724200A0A096LPH7 203 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms