RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 CDPF1Q6NVV7 123 aa10.9□□□□□ -0.66
CLCN6-201ENST00000312413 LYPD6BQ8NI32 183 aa10.9□□□□□ -0.66
CLCN6-201ENST00000312413 E7EQL1 145 aa10.9□□□□□ -0.66
CLCN6-201ENST00000312413 K7EN84 100 aa10.9□□□□□ -0.66
CLCN6-201ENST00000312413 C17orf58Q2M2W7 97 aa10.9□□□□□ -0.66
CLCN6-201ENST00000312413 COA6Q5JTJ3 125 aaKnown RBP10.9□□□□□ -0.66
CLCN6-201ENST00000312413 Q6ZVH6 145 aa10.9□□□□□ -0.66
CLCN6-201ENST00000312413 Q8TCH9 128 aa10.9□□□□□ -0.66
CLCN6-201ENST00000312413 PLXNA1Q9UIW2 1896 aa10.9□□□□□ -0.66
CLCN6-201ENST00000312413 ETV2O00321 342 aaPredicted RBP10.9□□□□□ -0.67
CLCN6-201ENST00000312413 IL15RAQ13261 267 aa10.9□□□□□ -0.67
CLCN6-201ENST00000312413 THAP8Q8NA92 274 aa10.9□□□□□ -0.67
CLCN6-201ENST00000312413 G3V318 75 aa10.89□□□□□ -0.67
CLCN6-201ENST00000312413 CFHR3Q02985 330 aa10.89□□□□□ -0.67
CLCN6-201ENST00000312413 TEX36Q5VZQ5 186 aa10.89□□□□□ -0.67
CLCN6-201ENST00000312413 LCTP09848 1927 aa10.89□□□□□ -0.67
CLCN6-201ENST00000312413 E9PQ18 207 aa10.89□□□□□ -0.67
CLCN6-201ENST00000312413 LTAP01374 205 aa10.89□□□□□ -0.67
CLCN6-201ENST00000312413 PRR20EP86478 221 aa10.89□□□□□ -0.67
CLCN6-201ENST00000312413 PRR20CP86479 221 aa10.89□□□□□ -0.67
CLCN6-201ENST00000312413 PRR20DP86480 221 aa10.89□□□□□ -0.67
CLCN6-201ENST00000312413 PRR20BP86481 221 aa10.89□□□□□ -0.67
CLCN6-201ENST00000312413 PRR20AP86496 221 aa10.89□□□□□ -0.67
CLCN6-201ENST00000312413 SRSF2Q01130 221 aaKnown RBP10.89□□□□□ -0.67
CLCN6-201ENST00000312413 NDUFA4O00483 81 aa10.89□□□□□ -0.67
CLCN6-201ENST00000312413 ASPHD1Q5U4P2 390 aa10.89□□□□□ -0.67
CLCN6-201ENST00000312413 LINC00311Q8N616 119 aa10.89□□□□□ -0.67
CLCN6-201ENST00000312413 ACACAQ13085 2346 aa10.89□□□□□ -0.67
CLCN6-201ENST00000312413 IGHV2-70DA0A0C4DH43 119 aa10.88□□□□□ -0.67
CLCN6-201ENST00000312413 IGLC1P0CG04 106 aa10.88□□□□□ -0.67
CLCN6-201ENST00000312413 VOPP1Q96AW1 172 aa10.88□□□□□ -0.67
CLCN6-201ENST00000312413 PRSS29PA6NIE9 313 aa10.88□□□□□ -0.67
CLCN6-201ENST00000312413 PCP2Q8IVA1 136 aa10.88□□□□□ -0.67
CLCN6-201ENST00000312413 C1orf43Q9BWL3 253 aa10.88□□□□□ -0.67
CLCN6-201ENST00000312413 SS18L2Q9UHA2 77 aa10.88□□□□□ -0.67
CLCN6-201ENST00000312413 TRPM7Q96QT4 1865 aa10.88□□□□□ -0.67
CLCN6-201ENST00000312413 ABCA4P78363 2273 aa10.88□□□□□ -0.67
CLCN6-201ENST00000312413 TRAV12-2A0A075B6T6 113 aa10.88□□□□□ -0.67
CLCN6-201ENST00000312413 Q6ZR03 302 aa10.88□□□□□ -0.67
CLCN6-201ENST00000312413 Q6ZS92 163 aa10.88□□□□□ -0.67
CLCN6-201ENST00000312413 ZNF493Q6ZR52 646 aa10.87□□□□□ -0.67
CLCN6-201ENST00000312413 KLF2Q9Y5W3 355 aaPredicted RBP10.87□□□□□ -0.67
CLCN6-201ENST00000312413 SCN5AQ14524 2016 aa10.87□□□□□ -0.67
CLCN6-201ENST00000312413 TEX48A0A1B0GUV7 120 aa10.87□□□□□ -0.67
CLCN6-201ENST00000312413 FAM120AOSQ5T036 256 aa10.87□□□□□ -0.67
CLCN6-201ENST00000312413 WDR86Q86TI4 376 aa10.87□□□□□ -0.67
CLCN6-201ENST00000312413 C15orf65H3BRN8 121 aa10.87□□□□□ -0.67
CLCN6-201ENST00000312413 CACNA1BQ00975 2339 aa10.87□□□□□ -0.67
CLCN6-201ENST00000312413 F5H768 121 aa10.87□□□□□ -0.67
CLCN6-201ENST00000312413 K7EMI3 77 aa10.87□□□□□ -0.67
CLCN6-201ENST00000312413 RS1O15537 224 aa10.87□□□□□ -0.67
CLCN6-201ENST00000312413 ACYP1P07311 99 aa10.87□□□□□ -0.67
CLCN6-201ENST00000312413 CEACAM8P31997 349 aaPredicted RBP10.87□□□□□ -0.67
CLCN6-201ENST00000312413 LINC01356Q8N9X3 169 aa10.87□□□□□ -0.67
CLCN6-201ENST00000312413 RUSC1-AS1Q66K80 236 aa10.86□□□□□ -0.67
CLCN6-201ENST00000312413 TPSG1Q9NRR2 321 aa10.86□□□□□ -0.67
CLCN6-201ENST00000312413 DAD1P61803 113 aa10.86□□□□□ -0.67
CLCN6-201ENST00000312413 RNF114Q9Y508 228 aa10.86□□□□□ -0.67
CLCN6-201ENST00000312413 BAALC-AS2P0C853 105 aa10.86□□□□□ -0.67
CLCN6-201ENST00000312413 LOXP28300 417 aaPredicted RBP10.86□□□□□ -0.67
CLCN6-201ENST00000312413 SLX1AQ9BQ83 275 aa10.86□□□□□ -0.67
CLCN6-201ENST00000312413 LINC01619G3V211 115 aa10.86□□□□□ -0.67
CLCN6-201ENST00000312413 SH2D6Q7Z4S9 175 aa10.85□□□□□ -0.67
CLCN6-201ENST00000312413 CACNA1HO95180 2353 aa10.85□□□□□ -0.67
CLCN6-201ENST00000312413 hADV29S1A0JD25 119 aa10.85□□□□□ -0.67
CLCN6-201ENST00000312413 SHISA9B4DS77 424 aa10.85□□□□□ -0.67
CLCN6-201ENST00000312413 CFHR4Q92496 578 aa10.85□□□□□ -0.67
CLCN6-201ENST00000312413 IGLL5B9A064 214 aa10.85□□□□□ -0.67
CLCN6-201ENST00000312413 ZNF134P52741 427 aa10.85□□□□□ -0.67
CLCN6-201ENST00000312413 CLPSL1A2RUU4 121 aa10.84□□□□□ -0.67
CLCN6-201ENST00000312413 POU2AF1Q16633 256 aa10.84□□□□□ -0.67
CLCN6-201ENST00000312413 DUX4L9Q6RFH8 374 aaPredicted RBP10.84□□□□□ -0.67
CLCN6-201ENST00000312413 RHOHQ15669 191 aa10.84□□□□□ -0.67
CLCN6-201ENST00000312413 PTPRDP23468 1912 aa10.84□□□□□ -0.67
CLCN6-201ENST00000312413 CRYGCP07315 174 aa10.84□□□□□ -0.67
CLCN6-201ENST00000312413 IGHV1-69DA0A0B4J2H0 117 aa10.84□□□□□ -0.67
CLCN6-201ENST00000312413 IGHV1-69P01742 117 aa10.84□□□□□ -0.67
CLCN6-201ENST00000312413 RNASE13Q5GAN3 156 aaKnown RBP10.84□□□□□ -0.67
CLCN6-201ENST00000312413 DOCK7Q96N67 2140 aa10.84□□□□□ -0.67
CLCN6-201ENST00000312413 MSMBP08118 114 aa10.83□□□□□ -0.67
CLCN6-201ENST00000312413 GATA3P23771 443 aa10.83□□□□□ -0.67
CLCN6-201ENST00000312413 DEFB121Q5J5C9 76 aa10.83□□□□□ -0.67
CLCN6-201ENST00000312413 ZNF491Q8N8L2 437 aa10.83□□□□□ -0.67
CLCN6-201ENST00000312413 PRB1P04280 392 aa10.83□□□□□ -0.68
CLCN6-201ENST00000312413 NBL1P41271 181 aa10.83□□□□□ -0.68
CLCN6-201ENST00000312413 ORMDL1Q9P0S3 153 aa10.83□□□□□ -0.68
CLCN6-201ENST00000312413 YLPM1P49750 1951 aaKnown RBP10.83□□□□□ -0.68
CLCN6-201ENST00000312413 EGR2P11161 476 aaPredicted RBP10.83□□□□□ -0.68
CLCN6-201ENST00000312413 USF3Q68DE3 2245 aa10.82□□□□□ -0.68
CLCN6-201ENST00000312413 SMIM20Q8N5G0 67 aa10.82□□□□□ -0.68
CLCN6-201ENST00000312413 NDUFS5O43920 106 aa10.82□□□□□ -0.68
CLCN6-201ENST00000312413 GNLYP22749 145 aa10.82□□□□□ -0.68
CLCN6-201ENST00000312413 RSPO1Q2MKA7 263 aaPredicted RBP10.82□□□□□ -0.68
CLCN6-201ENST00000312413 FOXI2Q6ZQN5 318 aa10.82□□□□□ -0.68
CLCN6-201ENST00000312413 COL6A6A6NMZ7 2263 aa10.82□□□□□ -0.68
CLCN6-201ENST00000312413 Q9H8V8 135 aa10.82□□□□□ -0.68
CLCN6-201ENST00000312413 MRPL53Q96EL3 112 aaKnown RBP10.81□□□□□ -0.68
CLCN6-201ENST00000312413 IGLV3-9A0A075B6K5 115 aa10.81□□□□□ -0.68
CLCN6-201ENST00000312413 LINC01545Q5VT33 79 aa10.81□□□□□ -0.68
CLCN6-201ENST00000312413 C17orf77Q96MU5 243 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms