RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 FLNCQ14315 2725 aa10.61□□□□□ -0.71
NPAS4-201ENST00000311034 UFSP1Q6NVU6 142 aa10.61□□□□□ -0.71
NPAS4-201ENST00000311034 BRD3OSQ6XYD6 125 aa10.61□□□□□ -0.71
NPAS4-201ENST00000311034 TEX48A0A1B0GUV7 120 aa10.61□□□□□ -0.71
NPAS4-201ENST00000311034 MGPP08493 103 aa10.61□□□□□ -0.71
NPAS4-201ENST00000311034 S100A7AQ86SG5 101 aa10.61□□□□□ -0.71
NPAS4-201ENST00000311034 G3V4G9 280 aa10.6□□□□□ -0.71
NPAS4-201ENST00000311034 ZC2HC1BQ5TFG8 222 aa10.6□□□□□ -0.71
NPAS4-201ENST00000311034 CHAC1Q9BUX1 264 aa10.6□□□□□ -0.71
NPAS4-201ENST00000311034 ADAMTSL5Q6ZMM2 481 aa10.6□□□□□ -0.71
NPAS4-201ENST00000311034 Q6ZQT7 251 aa10.6□□□□□ -0.71
NPAS4-201ENST00000311034 TMEM158Q8WZ71 300 aa10.6□□□□□ -0.71
NPAS4-201ENST00000311034 NPFFR1Q9GZQ6 430 aa10.6□□□□□ -0.71
NPAS4-201ENST00000311034 ZANQ9Y493 2812 aa10.6□□□□□ -0.71
NPAS4-201ENST00000311034 OVOL3O00110 214 aa10.59□□□□□ -0.71
NPAS4-201ENST00000311034 SPANXN1Q5VSR9 72 aa10.59□□□□□ -0.71
NPAS4-201ENST00000311034 PVRIGQ6DKI7 326 aa10.59□□□□□ -0.71
NPAS4-201ENST00000311034 AMTNQ6UX39 209 aa10.59□□□□□ -0.71
NPAS4-201ENST00000311034 PRR25Q96S07 402 aa10.59□□□□□ -0.71
NPAS4-201ENST00000311034 C21orf62Q9NYP8 219 aa10.59□□□□□ -0.71
NPAS4-201ENST00000311034 DPM3Q9P2X0 92 aa10.59□□□□□ -0.71
NPAS4-201ENST00000311034 NDUFA3O95167 84 aa10.59□□□□□ -0.71
NPAS4-201ENST00000311034 CRYGBP07316 175 aa10.59□□□□□ -0.71
NPAS4-201ENST00000311034 SAMD13Q5VXD3 122 aa10.59□□□□□ -0.71
NPAS4-201ENST00000311034 UTP20O75691 2785 aaKnown RBP10.59□□□□□ -0.71
NPAS4-201ENST00000311034 TRAV40A0A0B4J280 105 aa10.58□□□□□ -0.72
NPAS4-201ENST00000311034 F5H697 171 aa10.58□□□□□ -0.72
NPAS4-201ENST00000311034 MFAP4P55083 255 aa10.58□□□□□ -0.72
NPAS4-201ENST00000311034 CDSNQ15517 529 aa10.58□□□□□ -0.72
NPAS4-201ENST00000311034 PRRC2AP48634 2157 aaKnown RBP10.58□□□□□ -0.72
NPAS4-201ENST00000311034 TMEM8BA6NDV4 472 aa10.58□□□□□ -0.72
NPAS4-201ENST00000311034 NBR2O15453 112 aa10.58□□□□□ -0.72
NPAS4-201ENST00000311034 TNFRSF6BO95407 300 aa10.58□□□□□ -0.72
NPAS4-201ENST00000311034 IGLV1-47P01700 117 aa10.58□□□□□ -0.72
NPAS4-201ENST00000311034 IGKCP01834 107 aa10.58□□□□□ -0.72
NPAS4-201ENST00000311034 C16orf54Q6UWD8 224 aa10.58□□□□□ -0.72
NPAS4-201ENST00000311034 RAXQ9Y2V3 346 aa10.58□□□□□ -0.72
NPAS4-201ENST00000311034 OR5A1Q8NGJ0 315 aa10.57□□□□□ -0.72
NPAS4-201ENST00000311034 ZNF493Q6ZR52 646 aa10.57□□□□□ -0.72
NPAS4-201ENST00000311034 ZNF462Q96JM2 2506 aa10.57□□□□□ -0.72
NPAS4-201ENST00000311034 HOXB4P17483 251 aaPredicted RBP10.56□□□□□ -0.72
NPAS4-201ENST00000311034 RPL7P18124 248 aaKnown RBP10.56□□□□□ -0.72
NPAS4-201ENST00000311034 BMI1P35226 326 aa10.56□□□□□ -0.72
NPAS4-201ENST00000311034 C15orf32Q32M92 178 aa10.56□□□□□ -0.72
NPAS4-201ENST00000311034 HIST2H2BDQ6DRA6 164 aa10.56□□□□□ -0.72
NPAS4-201ENST00000311034 NEGR1Q7Z3B1 354 aa10.56□□□□□ -0.72
NPAS4-201ENST00000311034 HIST1H4GQ99525 98 aa10.56□□□□□ -0.72
NPAS4-201ENST00000311034 LINC01548A6NM66 108 aa10.56□□□□□ -0.72
NPAS4-201ENST00000311034 LYPD1Q8N2G4 141 aa10.56□□□□□ -0.72
NPAS4-201ENST00000311034 PRAC2D3DTV9 90 aa10.56□□□□□ -0.72
NPAS4-201ENST00000311034 H7C2G1 150 aa10.56□□□□□ -0.72
NPAS4-201ENST00000311034 C3orf36Q3SXR2 165 aa10.56□□□□□ -0.72
NPAS4-201ENST00000311034 SH2D6Q7Z4S9 175 aa10.56□□□□□ -0.72
NPAS4-201ENST00000311034 MAPK1IP1LQ8NDC0 245 aa10.56□□□□□ -0.72
NPAS4-201ENST00000311034 RAB1BQ9H0U4 201 aa10.56□□□□□ -0.72
NPAS4-201ENST00000311034 TRBV25-1A0A075B6N4 114 aa10.55□□□□□ -0.72
NPAS4-201ENST00000311034 H3BMG7 143 aa10.55□□□□□ -0.72
NPAS4-201ENST00000311034 WFDC2Q14508 124 aa10.55□□□□□ -0.72
NPAS4-201ENST00000311034 FAM74A4Q5TZK3 123 aa10.55□□□□□ -0.72
NPAS4-201ENST00000311034 ARPC1AQ92747 370 aa10.55□□□□□ -0.72
NPAS4-201ENST00000311034 AGRNO00468 2067 aa10.55□□□□□ -0.72
NPAS4-201ENST00000311034 EFNA4P52798 201 aa10.55□□□□□ -0.72
NPAS4-201ENST00000311034 IL17RELQ6ZVW7 336 aa10.55□□□□□ -0.72
NPAS4-201ENST00000311034 C8orf31Q8N9H6 132 aa10.55□□□□□ -0.72
NPAS4-201ENST00000311034 ZNF502Q8TBZ5 544 aa10.55□□□□□ -0.72
NPAS4-201ENST00000311034 MRPL35Q9NZE8 188 aaKnown RBP10.55□□□□□ -0.72
NPAS4-201ENST00000311034 TSSC4Q9Y5U2 329 aaPredicted RBP10.55□□□□□ -0.72
NPAS4-201ENST00000311034 ODF1Q14990 250 aa10.55□□□□□ -0.72
NPAS4-201ENST00000311034 DYNAPQ8N1N2 210 aa10.55□□□□□ -0.72
NPAS4-201ENST00000311034 WI2-2373I1.2A0A1W2PRP0 233 aa10.54□□□□□ -0.72
NPAS4-201ENST00000311034 SHISA9B4DS77 424 aa10.54□□□□□ -0.72
NPAS4-201ENST00000311034 DPM2O94777 84 aa10.54□□□□□ -0.72
NPAS4-201ENST00000311034 TRGV3P03979 118 aa10.54□□□□□ -0.72
NPAS4-201ENST00000311034 ETDBQ3ZM63 59 aa10.54□□□□□ -0.72
NPAS4-201ENST00000311034 MYOZ3Q8TDC0 251 aa10.54□□□□□ -0.72
NPAS4-201ENST00000311034 SMIM17P0DL12 118 aa10.54□□□□□ -0.72
NPAS4-201ENST00000311034 AZU1P20160 251 aa10.54□□□□□ -0.72
NPAS4-201ENST00000311034 ZNF479Q96JC4 524 aa10.54□□□□□ -0.72
NPAS4-201ENST00000311034 C16orf92Q96LL3 132 aa10.54□□□□□ -0.72
NPAS4-201ENST00000311034 LINC00477Q96M19 166 aa10.54□□□□□ -0.72
NPAS4-201ENST00000311034 DUX5Q96PT3 197 aa10.54□□□□□ -0.72
NPAS4-201ENST00000311034 FABP5P3A8MUU1 101 aa10.53□□□□□ -0.72
NPAS4-201ENST00000311034 B9A039 149 aa10.53□□□□□ -0.72
NPAS4-201ENST00000311034 F6UB75 175 aa10.53□□□□□ -0.72
NPAS4-201ENST00000311034 H3BVH4 76 aa10.53□□□□□ -0.72
NPAS4-201ENST00000311034 MRPS12O15235 138 aaKnown RBP10.53□□□□□ -0.72
NPAS4-201ENST00000311034 Q5PR19 223 aa10.53□□□□□ -0.72
NPAS4-201ENST00000311034 DTX2Q86UW9 622 aa10.53□□□□□ -0.72
NPAS4-201ENST00000311034 DPF1Q92782 380 aa10.53□□□□□ -0.72
NPAS4-201ENST00000311034 U3KQK5 164 aa10.53□□□□□ -0.72
NPAS4-201ENST00000311034 CEACAM3P40198 252 aa10.53□□□□□ -0.72
NPAS4-201ENST00000311034 KHDC1LQ5JSQ8 128 aa10.53□□□□□ -0.72
NPAS4-201ENST00000311034 ZNF562Q6V9R5 426 aa10.53□□□□□ -0.72
NPAS4-201ENST00000311034 KAAG1Q9UBP8 84 aa10.53□□□□□ -0.72
NPAS4-201ENST00000311034 VMO1Q7Z5L0 202 aa10.52□□□□□ -0.73
NPAS4-201ENST00000311034 TNFRSF14Q92956 283 aa10.52□□□□□ -0.73
NPAS4-201ENST00000311034 RNF185Q96GF1 192 aa10.52□□□□□ -0.73
NPAS4-201ENST00000311034 TRBV6-1A0A0K0K1D8 114 aa10.52□□□□□ -0.73
NPAS4-201ENST00000311034 TNFRSF13BO14836 293 aaPredicted RBP10.52□□□□□ -0.73
NPAS4-201ENST00000311034 SIVA1O15304 175 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms