RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 SHISA3A0PJX4 238 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 C16orf74Q96GX8 76 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 hADV29S1A0JD25 119 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 C4orf51C9J302 202 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 LYZL4Q96KX0 146 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 CLPSP04118 112 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 FOXC1Q12948 553 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 TSSC4Q9Y5U2 329 aaPredicted RBP3.22□□□□□ -1.89
USH2A-201ENST00000307340 CRYGCP07315 174 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 TGIF1Q15583 401 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 RPL39P5Q59GN2 51 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 FAM74A4Q5TZK3 123 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 IGLC2P0DOY2 106 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 IGLC3P0DOY3 106 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 FCN3O75636 299 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 NTF4P34130 210 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 C1orf147Q96MC9 270 aaPredicted RBP3.22□□□□□ -1.89
USH2A-201ENST00000307340 IGKV1-5P01602 117 aa3.22□□□□□ -1.89
USH2A-201ENST00000307340 CLEC19AQ6UXS0 136 aa3.21□□□□□ -1.89
USH2A-201ENST00000307340 CHCHD5Q9BSY4 110 aa3.21□□□□□ -1.89
USH2A-201ENST00000307340 K7EP34 96 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 RFPL3SP0C7P2 107 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 LINC01587Q99440 93 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 TRBV7-3A0A075B6L6 115 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 Q6Q795 121 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 C2orf82Q6UX34 121 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 RPP25Q9BUL9 199 aaKnown RBP3.21□□□□□ -1.9
USH2A-201ENST00000307340 NDUFA3O95167 84 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 B3GALT5-AS1P59052 145 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 DAZAP2Q15038 168 aaPredicted RBP3.21□□□□□ -1.9
USH2A-201ENST00000307340 LPAL2Q16609 132 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 TP73-AS1Q9UF72 201 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 LGALS9O00182 355 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 VPREB3Q9UKI3 123 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 A0A0B4J2C4 111 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 TRGV4A0A0C4DH28 118 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 J3KT08 172 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 PRIMA1Q86XR5 153 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 VOPP1Q96AW1 172 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 MST1LQ2TV78 715 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 TDGF1P3P51864 188 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 GFI1BQ5VTD9 330 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 TPRX1Q8N7U7 411 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 MDFICQ9P1T7 246 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 PRKNO60260 465 aaPredicted RBP3.21□□□□□ -1.9
USH2A-201ENST00000307340 ORMDL1Q9P0S3 153 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 RCHY1Q96PM5 261 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 C3orf79P0CE67 100 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 C1orf43Q9BWL3 253 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 C15orf65H3BRN8 121 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 ZNF561-AS1K7EIQ3 104 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 KIR3DS1Q14943 382 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 SLC25A29Q8N8R3 303 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 NBL1P41271 181 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 TFF3Q07654 80 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 FHL1Q13642 323 aa3.21□□□□□ -1.9
USH2A-201ENST00000307340 PATE4P0C8F1 98 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 GFI1Q99684 422 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 COX8CQ7Z4L0 72 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 GAGE12HA6NDE8 117 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 EGR2P11161 476 aaPredicted RBP3.2□□□□□ -1.9
USH2A-201ENST00000307340 CRIM1Q9NZV1 1036 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 FZR1Q9UM11 496 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 IGKV1D-13A0A0B4J2D9 117 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 DKK1O94907 266 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 IGKV1-13P0DP09 117 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 C2orf66Q6UXQ4 117 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 ZNF826PQ6ZT77 177 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 ZC2HC1BQ5TFG8 222 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 CSPG4Q6UVK1 2322 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 GAGE5Q13069 117 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 GAGE6Q13070 117 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 TMEM243Q9BU79 118 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 A0A0J9YX75 114 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 ZNF664Q8N3J9 261 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 SNRPCP09234 159 aaKnown RBP3.2□□□□□ -1.9
USH2A-201ENST00000307340 RNASE4P34096 147 aaKnown RBP3.2□□□□□ -1.9
USH2A-201ENST00000307340 SPACA3Q8IXA5 215 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 FXYD5Q96DB9 178 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 TM2D2Q9BX73 214 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 CSTL1Q9H114 145 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 PYGO1Q9Y3Y4 419 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 LINC01548A6NM66 108 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 IGKV1D-17A0A075B6S4 117 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 E9PLD3 99 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 COL4A2P08572 1712 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 SAP30O75446 220 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 SAA4P35542 130 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 FAM222AQ5U5X8 452 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 LYZL1Q6UWQ5 148 aa3.2□□□□□ -1.9
USH2A-201ENST00000307340 CELA3AP09093 270 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 LRRC75A-AS1Q8N1F1 130 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 LINC00479Q96M42 142 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 IGKV1-27A0A075B6S5 117 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 PSPNO60542 156 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 ZNF876PQ49A33 203 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 GAFA1Q96PS6 74 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 LYPD6Q86Y78 171 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 PIEZO1Q92508 2521 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 MUC6Q6W4X9 2439 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms