RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 CFHR3Q02985 330 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 ARPC1AQ92747 370 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 RPEQ96AT9 228 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 PRELID3AQ96N28 172 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 THYN1Q9P016 225 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 TRAV12-1A0A0B4J245 112 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 K7EQM0 130 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 TSPAN13O95857 204 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 KLRB1Q12918 225 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 PRR30Q53SZ7 412 aaPredicted RBP4.13□□□□□ -1.75
VPS50-202ENST00000305866 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 SMIM15Q7Z3B0 74 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 VMO1Q7Z5L0 202 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 ORMDL3Q8N138 153 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 CHAC1Q9BUX1 264 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 HINT2Q9BX68 163 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 IGKV2-40A0A087WW87 121 aaPredicted RBP4.13□□□□□ -1.75
VPS50-202ENST00000305866 TRBV7-1A0A0A6YYK4 115 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 A1L4Q6 167 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 GAGE10A6NGK3 116 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 CHEK1O14757 476 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 IGKV2D-40P01614 121 aaPredicted RBP4.13□□□□□ -1.75
VPS50-202ENST00000305866 NHLRC4P0CG21 123 aaPredicted RBP4.13□□□□□ -1.75
VPS50-202ENST00000305866 TMEM11P17152 192 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 AZU1P20160 251 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 TAL2Q16559 108 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 RNF151Q2KHN1 245 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 Q8N8P6 123 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 CLUHP3Q96NS8 147 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 SLC50A1Q9BRV3 221 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 DYNLRB1Q9NP97 96 aa4.13□□□□□ -1.75
VPS50-202ENST00000305866 DNAH1Q9P2D7 4330 aa4.12□□□□□ -1.75
VPS50-202ENST00000305866 IGHV3-72A0A0B4J1Y9 119 aa4.12□□□□□ -1.75
VPS50-202ENST00000305866 ENSAO43768 121 aaKnown RBP4.12□□□□□ -1.75
VPS50-202ENST00000305866 TNFRSF6BO95407 300 aa4.12□□□□□ -1.75
VPS50-202ENST00000305866 LMO4P61968 165 aa4.12□□□□□ -1.75
VPS50-202ENST00000305866 PRB3Q04118 309 aaPredicted RBP4.12□□□□□ -1.75
VPS50-202ENST00000305866 ERCC8Q13216 396 aa4.12□□□□□ -1.75
VPS50-202ENST00000305866 CDSNQ15517 529 aa4.12□□□□□ -1.75
VPS50-202ENST00000305866 SAMD5Q5TGI4 173 aa4.12□□□□□ -1.75
VPS50-202ENST00000305866 SIGMAR1Q99720 223 aa4.12□□□□□ -1.75
VPS50-202ENST00000305866 EDA2RQ9HAV5 297 aa4.12□□□□□ -1.75
VPS50-202ENST00000305866 FAM223BA6NKX1 122 aa4.12□□□□□ -1.75
VPS50-202ENST00000305866 K7ERU9 68 aa4.12□□□□□ -1.75
VPS50-202ENST00000305866 CSN3P07498 182 aa4.12□□□□□ -1.75
VPS50-202ENST00000305866 BMI1P35226 326 aa4.12□□□□□ -1.75
VPS50-202ENST00000305866 UQCRFS1P47985 274 aa4.12□□□□□ -1.75
VPS50-202ENST00000305866 TCTEX1D4Q5JR98 221 aa4.12□□□□□ -1.75
VPS50-202ENST00000305866 FAM223AQ8IWN6 122 aa4.12□□□□□ -1.75
VPS50-202ENST00000305866 RASL10AQ92737 203 aa4.12□□□□□ -1.75
VPS50-202ENST00000305866 CCDC140Q96MF4 163 aa4.12□□□□□ -1.75
VPS50-202ENST00000305866 PRORYQ9H606 182 aa4.12□□□□□ -1.75
VPS50-202ENST00000305866 C21orf62Q9NYP8 219 aa4.12□□□□□ -1.75
VPS50-202ENST00000305866 ONECUT1Q9UBC0 465 aa4.12□□□□□ -1.75
VPS50-202ENST00000305866 A0A087WX48 190 aa4.12□□□□□ -1.75
VPS50-202ENST00000305866 ZFP36P26651 326 aaKnown RBP4.12□□□□□ -1.75
VPS50-202ENST00000305866 NHLH1Q02575 133 aa4.12□□□□□ -1.75
VPS50-202ENST00000305866 PLGLAQ15195 96 aa4.12□□□□□ -1.75
VPS50-202ENST00000305866 C12orf74Q32Q52 190 aa4.12□□□□□ -1.75
VPS50-202ENST00000305866 C5orf56Q8N8D9 126 aa4.12□□□□□ -1.75
VPS50-202ENST00000305866 CITED1Q99966 193 aa4.12□□□□□ -1.75
VPS50-202ENST00000305866 F8W1H4 67 aa4.11□□□□□ -1.75
VPS50-202ENST00000305866 M0QXV9 152 aa4.11□□□□□ -1.75
VPS50-202ENST00000305866 APELAP0DMC3 54 aa4.11□□□□□ -1.75
VPS50-202ENST00000305866 TOMM6Q96B49 74 aa4.11□□□□□ -1.75
VPS50-202ENST00000305866 SPOCK3Q9BQ16 436 aa4.11□□□□□ -1.75
VPS50-202ENST00000305866 TMEM89A2RUT3 159 aa4.11□□□□□ -1.75
VPS50-202ENST00000305866 CIDEAO60543 219 aa4.11□□□□□ -1.75
VPS50-202ENST00000305866 SCGB2A1O75556 95 aa4.11□□□□□ -1.75
VPS50-202ENST00000305866 LGALS1P09382 135 aaKnown RBP4.11□□□□□ -1.75
VPS50-202ENST00000305866 TSPEAR-AS2P59090 65 aa4.11□□□□□ -1.75
VPS50-202ENST00000305866 Q8TAT8 98 aa4.11□□□□□ -1.75
VPS50-202ENST00000305866 GLMPQ8WWB7 406 aa4.11□□□□□ -1.75
VPS50-202ENST00000305866 TIMD4Q96H15 378 aa4.11□□□□□ -1.75
VPS50-202ENST00000305866 C20orf173Q96LM9 149 aa4.11□□□□□ -1.75
VPS50-202ENST00000305866 SPCS1Q9Y6A9 102 aa4.11□□□□□ -1.75
VPS50-202ENST00000305866 TMEM8BA6NDV4 472 aa4.1□□□□□ -1.75
VPS50-202ENST00000305866 A8MTW9 85 aa4.1□□□□□ -1.75
VPS50-202ENST00000305866 M0R381 172 aa4.1□□□□□ -1.75
VPS50-202ENST00000305866 SLC25A16P16260 332 aa4.1□□□□□ -1.75
VPS50-202ENST00000305866 CSN1S1P47710 185 aa4.1□□□□□ -1.75
VPS50-202ENST00000305866 LYZP61626 148 aa4.1□□□□□ -1.75
VPS50-202ENST00000305866 CD300EQ496F6 205 aaPredicted RBP4.1□□□□□ -1.75
VPS50-202ENST00000305866 ATP6V0E2Q8NHE4 81 aa4.1□□□□□ -1.75
VPS50-202ENST00000305866 ODF3Q96PU9 254 aa4.1□□□□□ -1.75
VPS50-202ENST00000305866 AHCTF1Q8WYP5 2266 aa4.1□□□□□ -1.75
VPS50-202ENST00000305866 EFNA4P52798 201 aa4.1□□□□□ -1.75
VPS50-202ENST00000305866 RRN3P1Q2M238 152 aa4.1□□□□□ -1.75
VPS50-202ENST00000305866 DAZAP1Q96EP5 407 aaKnown RBP4.1□□□□□ -1.75
VPS50-202ENST00000305866 MRPL35Q9NZE8 188 aaKnown RBP4.1□□□□□ -1.75
VPS50-202ENST00000305866 A0A1W2PPR1 153 aa4.1□□□□□ -1.75
VPS50-202ENST00000305866 GAGE12HA6NDE8 117 aa4.1□□□□□ -1.75
VPS50-202ENST00000305866 IGIPA6NJ69 53 aa4.1□□□□□ -1.75
VPS50-202ENST00000305866 HSBP1L1C9JCN9 74 aa4.1□□□□□ -1.75
VPS50-202ENST00000305866 IGLV1-40P01703 118 aa4.1□□□□□ -1.75
VPS50-202ENST00000305866 IL4P05112 153 aa4.1□□□□□ -1.75
VPS50-202ENST00000305866 PPIFP30405 207 aaKnown RBP4.1□□□□□ -1.75
VPS50-202ENST00000305866 IGFL4Q6B9Z1 124 aa4.1□□□□□ -1.75
VPS50-202ENST00000305866 SH2D6Q7Z4S9 175 aa4.1□□□□□ -1.75
VPS50-202ENST00000305866 OR8A1Q8NGG7 326 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms