RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 FAM208BQ5VWN6 2430 aa12.57□□□□□ -0.4
LONRF3-201ENST00000304778 WNK2Q9Y3S1 2297 aa12.57□□□□□ -0.4
LONRF3-201ENST00000304778 F8W1H4 67 aa12.57□□□□□ -0.4
LONRF3-201ENST00000304778 INSL3P51460 131 aa12.57□□□□□ -0.4
LONRF3-201ENST00000304778 KLF17Q5JT82 389 aaPredicted RBP12.57□□□□□ -0.4
LONRF3-201ENST00000304778 FLNCQ14315 2725 aa12.56□□□□□ -0.4
LONRF3-201ENST00000304778 SERTM2A0A1B0GWG4 89 aa12.56□□□□□ -0.4
LONRF3-201ENST00000304778 NHP2Q9NX24 153 aaKnown RBP12.56□□□□□ -0.4
LONRF3-201ENST00000304778 H3BMG7 143 aa12.56□□□□□ -0.4
LONRF3-201ENST00000304778 S4R3C0 116 aa12.56□□□□□ -0.4
LONRF3-201ENST00000304778 CT45A10P0DMU9 189 aa12.55□□□□□ -0.4
LONRF3-201ENST00000304778 PHLDA1Q8WV24 401 aaPredicted RBP12.55□□□□□ -0.4
LONRF3-201ENST00000304778 C8orf49Q96NF6 230 aa12.55□□□□□ -0.4
LONRF3-201ENST00000304778 AAMDCQ9H7C9 122 aa12.55□□□□□ -0.4
LONRF3-201ENST00000304778 LMO4P61968 165 aa12.55□□□□□ -0.4
LONRF3-201ENST00000304778 SIGLEC8Q9NYZ4 499 aa12.55□□□□□ -0.4
LONRF3-201ENST00000304778 IGLV11-55A0A075B6I3 123 aa12.54□□□□□ -0.4
LONRF3-201ENST00000304778 SMKR1H3BMG3 65 aa12.54□□□□□ -0.4
LONRF3-201ENST00000304778 C5orf64Q2M2E5 130 aa12.54□□□□□ -0.4
LONRF3-201ENST00000304778 ZNF493Q6ZR52 646 aa12.54□□□□□ -0.4
LONRF3-201ENST00000304778 FANCD2OSQ96PS1 177 aa12.54□□□□□ -0.4
LONRF3-201ENST00000304778 DKK2Q9UBU2 259 aa12.54□□□□□ -0.4
LONRF3-201ENST00000304778 TMEM213A2RRL7 107 aa12.54□□□□□ -0.4
LONRF3-201ENST00000304778 NPIPB5A8MRT5 1133 aa12.54□□□□□ -0.4
LONRF3-201ENST00000304778 ZFHX3Q15911 3703 aa12.54□□□□□ -0.4
LONRF3-201ENST00000304778 MFAP4P55083 255 aa12.54□□□□□ -0.4
LONRF3-201ENST00000304778 MINOS1Q5TGZ0 78 aa12.54□□□□□ -0.4
LONRF3-201ENST00000304778 AMTNQ6UX39 209 aa12.54□□□□□ -0.4
LONRF3-201ENST00000304778 MINOS1-NBL1R4GNA1 71 aa12.54□□□□□ -0.4
LONRF3-201ENST00000304778 SPG11Q96JI7 2443 aa12.54□□□□□ -0.4
LONRF3-201ENST00000304778 NCBP2LA6PVI3 153 aaKnown RBP12.53□□□□□ -0.4
LONRF3-201ENST00000304778 IGHV4-39P01824 125 aa12.53□□□□□ -0.4
LONRF3-201ENST00000304778 MED13LQ71F56 2210 aa12.53□□□□□ -0.4
LONRF3-201ENST00000304778 USP9XQ93008 2570 aaPredicted RBP12.53□□□□□ -0.4
LONRF3-201ENST00000304778 IGKV2D-26A0A0A0MRZ7 120 aa12.53□□□□□ -0.4
LONRF3-201ENST00000304778 F8W735 103 aaPredicted RBP12.53□□□□□ -0.4
LONRF3-201ENST00000304778 IFI27L1Q96BM0 104 aa12.53□□□□□ -0.4
LONRF3-201ENST00000304778 BBC3Q96PG8 261 aaPredicted RBP12.53□□□□□ -0.4
LONRF3-201ENST00000304778 CHAC1Q9BUX1 264 aa12.53□□□□□ -0.4
LONRF3-201ENST00000304778 OOSP1A8MZH6 123 aa12.52□□□□□ -0.4
LONRF3-201ENST00000304778 MRPL16Q9NX20 251 aaKnown RBP12.52□□□□□ -0.4
LONRF3-201ENST00000304778 D6R8Y8 96 aa12.52□□□□□ -0.41
LONRF3-201ENST00000304778 E9PLD3 99 aa12.52□□□□□ -0.41
LONRF3-201ENST00000304778 AMN1Q8IY45 258 aa12.52□□□□□ -0.41
LONRF3-201ENST00000304778 C20orf78Q9BR46 151 aa12.52□□□□□ -0.41
LONRF3-201ENST00000304778 Q8N6K4 173 aa12.51□□□□□ -0.41
LONRF3-201ENST00000304778 IGLL5B9A064 214 aa12.51□□□□□ -0.41
LONRF3-201ENST00000304778 NDPQ00604 133 aa12.51□□□□□ -0.41
LONRF3-201ENST00000304778 LYZL1Q6UWQ5 148 aa12.51□□□□□ -0.41
LONRF3-201ENST00000304778 ZNF562Q6V9R5 426 aa12.51□□□□□ -0.41
LONRF3-201ENST00000304778 ZNF479Q96JC4 524 aa12.51□□□□□ -0.41
LONRF3-201ENST00000304778 SH2D1AO60880 128 aa12.51□□□□□ -0.41
LONRF3-201ENST00000304778 HBDP02042 147 aa12.51□□□□□ -0.41
LONRF3-201ENST00000304778 C21orf62Q9NYP8 219 aa12.51□□□□□ -0.41
LONRF3-201ENST00000304778 UBE2E1P51965 193 aa12.5□□□□□ -0.41
LONRF3-201ENST00000304778 EBI3Q14213 229 aa12.5□□□□□ -0.41
LONRF3-201ENST00000304778 COX8CQ7Z4L0 72 aa12.5□□□□□ -0.41
LONRF3-201ENST00000304778 TTC9CQ8N5M4 171 aa12.5□□□□□ -0.41
LONRF3-201ENST00000304778 GAS8-AS1O95177 125 aa12.5□□□□□ -0.41
LONRF3-201ENST00000304778 CFAP161Q6P656 301 aa12.5□□□□□ -0.41
LONRF3-201ENST00000304778 AJUBAQ96IF1 538 aa12.5□□□□□ -0.41
LONRF3-201ENST00000304778 U3KQK5 164 aa12.5□□□□□ -0.41
LONRF3-201ENST00000304778 AGRNO00468 2067 aa12.5□□□□□ -0.41
LONRF3-201ENST00000304778 IGKV2-40A0A087WW87 121 aaPredicted RBP12.49□□□□□ -0.41
LONRF3-201ENST00000304778 IGKV2D-40P01614 121 aaPredicted RBP12.49□□□□□ -0.41
LONRF3-201ENST00000304778 RPL7P18124 248 aaKnown RBP12.49□□□□□ -0.41
LONRF3-201ENST00000304778 GATA3P23771 443 aa12.49□□□□□ -0.41
LONRF3-201ENST00000304778 GAGE13Q4V321 117 aa12.49□□□□□ -0.41
LONRF3-201ENST00000304778 PRELID3AQ96N28 172 aa12.49□□□□□ -0.41
LONRF3-201ENST00000304778 FAM104BQ5XKR9 115 aa12.49□□□□□ -0.41
LONRF3-201ENST00000304778 HIGD1BQ9P298 99 aa12.49□□□□□ -0.41
LONRF3-201ENST00000304778 LRRK2Q5S007 2527 aa12.49□□□□□ -0.41
LONRF3-201ENST00000304778 TRBV25-1A0A075B6N4 114 aa12.48□□□□□ -0.41
LONRF3-201ENST00000304778 PPIFP30405 207 aaKnown RBP12.48□□□□□ -0.41
LONRF3-201ENST00000304778 CEND1Q8N111 149 aa12.48□□□□□ -0.41
LONRF3-201ENST00000304778 SPINK8P0C7L1 97 aa12.48□□□□□ -0.41
LONRF3-201ENST00000304778 SAA4P35542 130 aa12.48□□□□□ -0.41
LONRF3-201ENST00000304778 C8orf86Q6ZUL3 223 aa12.48□□□□□ -0.41
LONRF3-201ENST00000304778 ORMDL3Q8N138 153 aa12.48□□□□□ -0.41
LONRF3-201ENST00000304778 PRR25Q96S07 402 aa12.48□□□□□ -0.41
LONRF3-201ENST00000304778 CCL19Q99731 98 aa12.48□□□□□ -0.41
LONRF3-201ENST00000304778 A0A1B0GWB2 263 aa12.47□□□□□ -0.41
LONRF3-201ENST00000304778 IGHV3-23P01764 117 aa12.47□□□□□ -0.41
LONRF3-201ENST00000304778 ZNF418Q8TF45 676 aaPredicted RBP12.47□□□□□ -0.41
LONRF3-201ENST00000304778 UTP20O75691 2785 aaKnown RBP12.47□□□□□ -0.41
LONRF3-201ENST00000304778 IGFL4Q6B9Z1 124 aa12.47□□□□□ -0.41
LONRF3-201ENST00000304778 Q8N9W7 124 aa12.46□□□□□ -0.41
LONRF3-201ENST00000304778 SYT8Q8NBV8 401 aa12.46□□□□□ -0.41
LONRF3-201ENST00000304778 TM2D2Q9BX73 214 aa12.46□□□□□ -0.41
LONRF3-201ENST00000304778 PRO0461Q9UI25 63 aa12.46□□□□□ -0.41
LONRF3-201ENST00000304778 SCGB2A1O75556 95 aa12.46□□□□□ -0.42
LONRF3-201ENST00000304778 TSPAN13O95857 204 aa12.46□□□□□ -0.42
LONRF3-201ENST00000304778 MRPL51Q4U2R6 128 aaKnown RBP12.46□□□□□ -0.42
LONRF3-201ENST00000304778 SS18L2Q9UHA2 77 aa12.46□□□□□ -0.42
LONRF3-201ENST00000304778 ZNF502Q8TBZ5 544 aa12.45□□□□□ -0.42
LONRF3-201ENST00000304778 RNF183Q96D59 192 aa12.45□□□□□ -0.42
LONRF3-201ENST00000304778 IGHV7-81A0A0B4J1V7 117 aa12.45□□□□□ -0.42
LONRF3-201ENST00000304778 APOMO95445 188 aa12.45□□□□□ -0.42
LONRF3-201ENST00000304778 MT-ATP8P03928 68 aa12.45□□□□□ -0.42
LONRF3-201ENST00000304778 CTSGP08311 255 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms