RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 ZFP2Q6ZN57 461 aa11.42□□□□□ -0.58
HIPK3-201ENST00000303296 PFN1P07737 140 aaKnown RBP11.42□□□□□ -0.58
HIPK3-201ENST00000303296 ROS1P08922 2347 aa11.42□□□□□ -0.58
HIPK3-201ENST00000303296 TMEM75Q8N9X5 138 aa11.42□□□□□ -0.58
HIPK3-201ENST00000303296 HLA-DMBP28068 263 aa11.42□□□□□ -0.58
HIPK3-201ENST00000303296 C3orf22Q8N5N4 141 aa11.42□□□□□ -0.58
HIPK3-201ENST00000303296 OOSP1A8MZH6 123 aa11.41□□□□□ -0.58
HIPK3-201ENST00000303296 RNF138Q8WVD3 245 aa11.41□□□□□ -0.58
HIPK3-201ENST00000303296 MRPS18CQ9Y3D5 142 aaKnown RBP11.41□□□□□ -0.58
HIPK3-201ENST00000303296 ZNF664Q8N3J9 261 aa11.41□□□□□ -0.58
HIPK3-201ENST00000303296 GAFA1Q96PS6 74 aa11.41□□□□□ -0.58
HIPK3-201ENST00000303296 MRPL27Q9P0M9 148 aaKnown RBP11.41□□□□□ -0.58
HIPK3-201ENST00000303296 SHISA3A0PJX4 238 aa11.41□□□□□ -0.58
HIPK3-201ENST00000303296 A0A096LNI7 61 aa11.41□□□□□ -0.58
HIPK3-201ENST00000303296 IGKV1-9A0A0C4DH69 117 aa11.41□□□□□ -0.58
HIPK3-201ENST00000303296 J3QQQ9 107 aa11.41□□□□□ -0.58
HIPK3-201ENST00000303296 NTN3O00634 580 aaPredicted RBP11.41□□□□□ -0.58
HIPK3-201ENST00000303296 IGKV1-16P04430 117 aa11.41□□□□□ -0.58
HIPK3-201ENST00000303296 GYPEP15421 78 aa11.41□□□□□ -0.58
HIPK3-201ENST00000303296 H0YIZ8 118 aa11.41□□□□□ -0.58
HIPK3-201ENST00000303296 WFDC11Q8NEX6 87 aa11.41□□□□□ -0.58
HIPK3-201ENST00000303296 HELZP42694 1942 aaKnown RBP11.41□□□□□ -0.58
HIPK3-201ENST00000303296 TAF1LQ8IZX4 1826 aa11.41□□□□□ -0.58
HIPK3-201ENST00000303296 RHOHQ15669 191 aa11.41□□□□□ -0.58
HIPK3-201ENST00000303296 MRPL35Q9NZE8 188 aaKnown RBP11.41□□□□□ -0.58
HIPK3-201ENST00000303296 STRCP1A6NGW2 1772 aa11.4□□□□□ -0.58
HIPK3-201ENST00000303296 A0A0U1RQV1 116 aa11.4□□□□□ -0.58
HIPK3-201ENST00000303296 WNK1Q9H4A3 2382 aa11.4□□□□□ -0.58
HIPK3-201ENST00000303296 LINC00473A8K010 186 aa11.4□□□□□ -0.58
HIPK3-201ENST00000303296 IGLC2P0DOY2 106 aa11.4□□□□□ -0.58
HIPK3-201ENST00000303296 IGLC3P0DOY3 106 aa11.4□□□□□ -0.58
HIPK3-201ENST00000303296 SLC25A29Q8N8R3 303 aa11.4□□□□□ -0.58
HIPK3-201ENST00000303296 K7EP13 123 aa11.4□□□□□ -0.58
HIPK3-201ENST00000303296 ZNF134P52741 427 aa11.4□□□□□ -0.58
HIPK3-201ENST00000303296 DEFB136Q30KP8 78 aa11.4□□□□□ -0.58
HIPK3-201ENST00000303296 MED13LQ71F56 2210 aa11.4□□□□□ -0.58
HIPK3-201ENST00000303296 GFI1Q99684 422 aa11.4□□□□□ -0.59
HIPK3-201ENST00000303296 A0A1W2PPM0 123 aa11.39□□□□□ -0.59
HIPK3-201ENST00000303296 LMO1P25800 156 aa11.39□□□□□ -0.59
HIPK3-201ENST00000303296 SRRM5B3KS81 715 aa11.39□□□□□ -0.59
HIPK3-201ENST00000303296 PRSS46E5RG02 174 aa11.39□□□□□ -0.59
HIPK3-201ENST00000303296 MPZP25189 248 aa11.39□□□□□ -0.59
HIPK3-201ENST00000303296 PRR4Q16378 134 aa11.39□□□□□ -0.59
HIPK3-201ENST00000303296 APRG1Q8IVJ8 170 aa11.39□□□□□ -0.59
HIPK3-201ENST00000303296 PIFOQ8TCI5 191 aa11.39□□□□□ -0.59
HIPK3-201ENST00000303296 DLEC1Q9Y238 1755 aa11.39□□□□□ -0.59
HIPK3-201ENST00000303296 TET1Q8NFU7 2136 aa11.39□□□□□ -0.59
HIPK3-201ENST00000303296 LY75O60449 1722 aa11.39□□□□□ -0.59
HIPK3-201ENST00000303296 SHANK2-AS3Q9BTD1 123 aa11.39□□□□□ -0.59
HIPK3-201ENST00000303296 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.38□□□□□ -0.59
HIPK3-201ENST00000303296 NDUFB8O95169 186 aa11.38□□□□□ -0.59
HIPK3-201ENST00000303296 CCL24O00175 119 aa11.38□□□□□ -0.59
HIPK3-201ENST00000303296 CNOT1A5YKK6 2376 aaKnown RBP11.38□□□□□ -0.59
HIPK3-201ENST00000303296 TRBV24-1A0A075B6N3 115 aa11.38□□□□□ -0.59
HIPK3-201ENST00000303296 COX7A2LO14548 114 aa11.38□□□□□ -0.59
HIPK3-201ENST00000303296 SMIM20Q8N5G0 67 aa11.38□□□□□ -0.59
HIPK3-201ENST00000303296 ZNF362Q5T0B9 420 aaPredicted RBP11.38□□□□□ -0.59
HIPK3-201ENST00000303296 ICOSQ9Y6W8 199 aa11.38□□□□□ -0.59
HIPK3-201ENST00000303296 MRPL55Q7Z7F7 128 aaKnown RBP11.38□□□□□ -0.59
HIPK3-201ENST00000303296 IGLV3-9A0A075B6K5 115 aa11.37□□□□□ -0.59
HIPK3-201ENST00000303296 IGHV1-69DA0A0B4J2H0 117 aa11.37□□□□□ -0.59
HIPK3-201ENST00000303296 IGHV1-69P01742 117 aa11.37□□□□□ -0.59
HIPK3-201ENST00000303296 MRPL53Q96EL3 112 aaKnown RBP11.37□□□□□ -0.59
HIPK3-201ENST00000303296 FAM110AQ9BQ89 295 aa11.37□□□□□ -0.59
HIPK3-201ENST00000303296 SPRY2O43597 315 aa11.37□□□□□ -0.59
HIPK3-201ENST00000303296 LTAP01374 205 aa11.37□□□□□ -0.59
HIPK3-201ENST00000303296 ZFP36L1Q07352 338 aaKnown RBP11.37□□□□□ -0.59
HIPK3-201ENST00000303296 RNF5Q99942 180 aa11.37□□□□□ -0.59
HIPK3-201ENST00000303296 SPANXDQ9BXN6 97 aa11.37□□□□□ -0.59
HIPK3-201ENST00000303296 ZNF883P0CG24 379 aa11.37□□□□□ -0.59
HIPK3-201ENST00000303296 ACACAQ13085 2346 aa11.37□□□□□ -0.59
HIPK3-201ENST00000303296 GNRH2O43555 120 aa11.37□□□□□ -0.59
HIPK3-201ENST00000303296 HERV-K104P63124 156 aa11.37□□□□□ -0.59
HIPK3-201ENST00000303296 SMIM27A0A1W2PRY6 76 aa11.36□□□□□ -0.59
HIPK3-201ENST00000303296 LAIR2Q6ISS4 152 aa11.36□□□□□ -0.59
HIPK3-201ENST00000303296 DEFB125Q8N687 156 aa11.36□□□□□ -0.59
HIPK3-201ENST00000303296 E7EQL1 145 aa11.36□□□□□ -0.59
HIPK3-201ENST00000303296 KIAA1551Q9HCM1 1747 aa11.36□□□□□ -0.59
HIPK3-201ENST00000303296 USP17L23D6RBM5 183 aa11.36□□□□□ -0.59
HIPK3-201ENST00000303296 LYPD6Q86Y78 171 aa11.36□□□□□ -0.59
HIPK3-201ENST00000303296 PARP14Q460N5 1801 aa11.36□□□□□ -0.59
HIPK3-201ENST00000303296 FAM236AA0A1B0GUQ0 79 aa11.36□□□□□ -0.59
HIPK3-201ENST00000303296 FAM236BA0A1B0GV22 79 aa11.36□□□□□ -0.59
HIPK3-201ENST00000303296 TMEM61Q8N0U2 210 aa11.36□□□□□ -0.59
HIPK3-201ENST00000303296 KLF2Q9Y5W3 355 aaPredicted RBP11.36□□□□□ -0.59
HIPK3-201ENST00000303296 BCORQ6W2J9 1755 aa11.36□□□□□ -0.59
HIPK3-201ENST00000303296 IGKV1-12A0A0C4DH73 117 aa11.35□□□□□ -0.59
HIPK3-201ENST00000303296 GFRA4Q9GZZ7 299 aa11.35□□□□□ -0.59
HIPK3-201ENST00000303296 PDE6HQ13956 83 aa11.35□□□□□ -0.59
HIPK3-201ENST00000303296 KLHDC3Q9BQ90 382 aa11.35□□□□□ -0.59
HIPK3-201ENST00000303296 DEFB4AO15263 64 aa11.35□□□□□ -0.59
HIPK3-201ENST00000303296 LY6G6FQ5SQ64 297 aa11.35□□□□□ -0.59
HIPK3-201ENST00000303296 POLR3KQ9Y2Y1 108 aaPredicted RBP11.35□□□□□ -0.59
HIPK3-201ENST00000303296 B9D2Q9BPU9 175 aa11.35□□□□□ -0.59
HIPK3-201ENST00000303296 WNK3Q9BYP7 1800 aa11.35□□□□□ -0.59
HIPK3-201ENST00000303296 IGKV2-24A0A0C4DH68 120 aa11.34□□□□□ -0.59
HIPK3-201ENST00000303296 GATA3P23771 443 aa11.34□□□□□ -0.59
HIPK3-201ENST00000303296 DAND5Q8N907 189 aa11.34□□□□□ -0.59
HIPK3-201ENST00000303296 K7EP34 96 aa11.34□□□□□ -0.59
HIPK3-201ENST00000303296 IGLV3-21P80748 117 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms