RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 TRAV9-1A0A075B6T8 112 aa9.68□□□□□ -0.86
CCDC7-202ENST00000302316 FOXI2Q6ZQN5 318 aa9.68□□□□□ -0.86
CCDC7-202ENST00000302316 PRIMA1Q86XR5 153 aa9.68□□□□□ -0.86
CCDC7-202ENST00000302316 NEU1Q99519 415 aa9.68□□□□□ -0.86
CCDC7-202ENST00000302316 SAV1Q9H4B6 383 aaPredicted RBP9.68□□□□□ -0.86
CCDC7-202ENST00000302316 MAP6D1Q9H9H5 199 aa9.68□□□□□ -0.86
CCDC7-202ENST00000302316 FABP5P3A8MUU1 101 aa9.68□□□□□ -0.86
CCDC7-202ENST00000302316 IGLV1-51P01701 117 aa9.68□□□□□ -0.86
CCDC7-202ENST00000302316 PRR9Q5T870 116 aa9.68□□□□□ -0.86
CCDC7-202ENST00000302316 FAM19A4Q96LR4 140 aa9.68□□□□□ -0.86
CCDC7-202ENST00000302316 NAT8BQ9UHF3 227 aa9.68□□□□□ -0.86
CCDC7-202ENST00000302316 ZNF256Q9Y2P7 627 aaPredicted RBP9.68□□□□□ -0.86
CCDC7-202ENST00000302316 TRBV7-9A0A0J9YWB2 115 aa9.67□□□□□ -0.86
CCDC7-202ENST00000302316 TMEM189A5PLL7 270 aa9.67□□□□□ -0.86
CCDC7-202ENST00000302316 HIGD1CA8MV81 97 aa9.67□□□□□ -0.86
CCDC7-202ENST00000302316 SPINK4O60575 86 aa9.67□□□□□ -0.86
CCDC7-202ENST00000302316 DUSP14O95147 198 aaKnown RBP9.67□□□□□ -0.86
CCDC7-202ENST00000302316 IGKV3-20P01619 116 aa9.67□□□□□ -0.86
CCDC7-202ENST00000302316 GZMBP10144 247 aa9.67□□□□□ -0.86
CCDC7-202ENST00000302316 ZFAND2AQ8N6M9 145 aa9.67□□□□□ -0.86
CCDC7-202ENST00000302316 TMSB15BA0A087X1C1 80 aa9.67□□□□□ -0.86
CCDC7-202ENST00000302316 TYMSP04818 313 aa9.67□□□□□ -0.86
CCDC7-202ENST00000302316 GPX1P07203 203 aa9.67□□□□□ -0.86
CCDC7-202ENST00000302316 NUP35Q8NFH5 326 aa9.67□□□□□ -0.86
CCDC7-202ENST00000302316 GFRA4Q9GZZ7 299 aa9.67□□□□□ -0.86
CCDC7-202ENST00000302316 KNCNA6PVL3 124 aa9.66□□□□□ -0.86
CCDC7-202ENST00000302316 ORM1P02763 201 aa9.66□□□□□ -0.86
CCDC7-202ENST00000302316 CRISP2P16562 243 aa9.66□□□□□ -0.86
CCDC7-202ENST00000302316 ACTL10Q5JWF8 245 aa9.66□□□□□ -0.86
CCDC7-202ENST00000302316 OR2K2Q8NGT1 345 aa9.66□□□□□ -0.86
CCDC7-202ENST00000302316 GTSF1Q8WW33 167 aa9.66□□□□□ -0.86
CCDC7-202ENST00000302316 SRD5A3Q9H8P0 318 aa9.66□□□□□ -0.86
CCDC7-202ENST00000302316 XKRY2A2RUG3 117 aa9.65□□□□□ -0.86
CCDC7-202ENST00000302316 ZNF124Q15973 351 aa9.65□□□□□ -0.86
CCDC7-202ENST00000302316 MRPL54Q6P161 138 aaKnown RBP9.65□□□□□ -0.86
CCDC7-202ENST00000302316 ODF3Q96PU9 254 aa9.65□□□□□ -0.86
CCDC7-202ENST00000302316 FAM231BA6NCW3 169 aa9.65□□□□□ -0.86
CCDC7-202ENST00000302316 C1orf196B1AJZ1 125 aa9.65□□□□□ -0.86
CCDC7-202ENST00000302316 HLA-DRB4P13762 266 aa9.65□□□□□ -0.86
CCDC7-202ENST00000302316 LEPP41159 167 aa9.65□□□□□ -0.86
CCDC7-202ENST00000302316 ODF3L2Q3SX64 289 aa9.65□□□□□ -0.86
CCDC7-202ENST00000302316 APRG1Q8IVJ8 170 aa9.65□□□□□ -0.86
CCDC7-202ENST00000302316 PGLYRP4Q96LB8 373 aa9.65□□□□□ -0.86
CCDC7-202ENST00000302316 HLA-DRB4X5D2U9 266 aa9.65□□□□□ -0.86
CCDC7-202ENST00000302316 RNASE4P34096 147 aaKnown RBP9.64□□□□□ -0.87
CCDC7-202ENST00000302316 RPS20P60866 119 aaKnown RBP9.64□□□□□ -0.87
CCDC7-202ENST00000302316 KIR3DS1Q14943 382 aa9.64□□□□□ -0.87
CCDC7-202ENST00000302316 LINC01559Q495D7 138 aa9.64□□□□□ -0.87
CCDC7-202ENST00000302316 TRAV21A0A0B4J279 112 aa9.64□□□□□ -0.87
CCDC7-202ENST00000302316 KLLNB2CW77 178 aa9.64□□□□□ -0.87
CCDC7-202ENST00000302316 OR11H12B2RN74 326 aa9.64□□□□□ -0.87
CCDC7-202ENST00000302316 TRGC2P03986 189 aa9.64□□□□□ -0.87
CCDC7-202ENST00000302316 Q6ZQT7 251 aa9.64□□□□□ -0.87
CCDC7-202ENST00000302316 SPATA3Q8NHX4 192 aa9.64□□□□□ -0.87
CCDC7-202ENST00000302316 ZNF747Q9BV97 191 aa9.64□□□□□ -0.87
CCDC7-202ENST00000302316 C11orf21Q9P2W6 132 aa9.64□□□□□ -0.87
CCDC7-202ENST00000302316 H3BMM0 161 aa9.63□□□□□ -0.87
CCDC7-202ENST00000302316 ZFP82Q8N141 532 aa9.63□□□□□ -0.87
CCDC7-202ENST00000302316 TPPP3Q9BW30 176 aa9.63□□□□□ -0.87
CCDC7-202ENST00000302316 NAGKQ9UJ70 344 aa9.63□□□□□ -0.87
CCDC7-202ENST00000302316 M0R2Z0 102 aa9.62□□□□□ -0.87
CCDC7-202ENST00000302316 FRMD6-AS1P0C7T7 363 aa9.62□□□□□ -0.87
CCDC7-202ENST00000302316 TSPOP30536 169 aa9.62□□□□□ -0.87
CCDC7-202ENST00000302316 CDKN1BP46527 198 aa9.62□□□□□ -0.87
CCDC7-202ENST00000302316 RAB5BP61020 215 aa9.62□□□□□ -0.87
CCDC7-202ENST00000302316 SPINK13Q1W4C9 94 aa9.62□□□□□ -0.87
CCDC7-202ENST00000302316 C9orf66Q5T8R8 295 aa9.62□□□□□ -0.87
CCDC7-202ENST00000302316 Q6AWC8 147 aa9.62□□□□□ -0.87
CCDC7-202ENST00000302316 C3orf56Q8N813 242 aa9.62□□□□□ -0.87
CCDC7-202ENST00000302316 SORL1Q92673 2214 aa9.62□□□□□ -0.87
CCDC7-202ENST00000302316 FBN1P35555 2871 aaKnown RBP9.62□□□□□ -0.87
CCDC7-202ENST00000302316 IGKV3D-20A0A0C4DH25 116 aa9.62□□□□□ -0.87
CCDC7-202ENST00000302316 GRIFINA4D1Z8 144 aa9.62□□□□□ -0.87
CCDC7-202ENST00000302316 INSL3P51460 131 aa9.62□□□□□ -0.87
CCDC7-202ENST00000302316 FOXA3P55318 350 aaPredicted RBP9.62□□□□□ -0.87
CCDC7-202ENST00000302316 AMTNQ6UX39 209 aa9.62□□□□□ -0.87
CCDC7-202ENST00000302316 ATP5L2Q7Z4Y8 100 aa9.62□□□□□ -0.87
CCDC7-202ENST00000302316 TRAV12-2A0A075B6T6 113 aa9.61□□□□□ -0.87
CCDC7-202ENST00000302316 C7orf71A4D174 169 aa9.61□□□□□ -0.87
CCDC7-202ENST00000302316 SNURFLB1AK76 121 aa9.61□□□□□ -0.87
CCDC7-202ENST00000302316 BEAN1Q3B7T3 259 aa9.61□□□□□ -0.87
CCDC7-202ENST00000302316 GFI1BQ5VTD9 330 aa9.61□□□□□ -0.87
CCDC7-202ENST00000302316 C12orf54Q6X4T0 127 aa9.61□□□□□ -0.87
CCDC7-202ENST00000302316 FRZBQ92765 325 aa9.61□□□□□ -0.87
CCDC7-202ENST00000302316 TRAPPC1Q9Y5R8 145 aa9.61□□□□□ -0.87
CCDC7-202ENST00000302316 VWFP04275 2813 aa9.61□□□□□ -0.87
CCDC7-202ENST00000302316 A8MTW9 85 aa9.61□□□□□ -0.87
CCDC7-202ENST00000302316 CD7P09564 240 aa9.61□□□□□ -0.87
CCDC7-202ENST00000302316 CMC4P56277 68 aaPredicted RBP9.61□□□□□ -0.87
CCDC7-202ENST00000302316 RAB4BP61018 213 aa9.61□□□□□ -0.87
CCDC7-202ENST00000302316 FER1L6-AS1Q8NA97 138 aa9.61□□□□□ -0.87
CCDC7-202ENST00000302316 TMEM158Q8WZ71 300 aa9.61□□□□□ -0.87
CCDC7-202ENST00000302316 AGRNO00468 2067 aa9.6□□□□□ -0.87
CCDC7-202ENST00000302316 TRAV12-3A0A0B4J271 114 aa9.6□□□□□ -0.87
CCDC7-202ENST00000302316 RBMY1BA6NDE4 496 aaKnown RBP9.6□□□□□ -0.87
CCDC7-202ENST00000302316 RBMY1EA6NEQ0 496 aaKnown RBP9.6□□□□□ -0.87
CCDC7-202ENST00000302316 RBMY1DP0C7P1 496 aaKnown RBP9.6□□□□□ -0.87
CCDC7-202ENST00000302316 FXYD7P58549 80 aa9.6□□□□□ -0.87
CCDC7-202ENST00000302316 FABP9Q0Z7S8 132 aa9.6□□□□□ -0.87
CCDC7-202ENST00000302316 COX19Q49B96 90 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms