RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 PRR13Q9NZ81 148 aa4.25□□□□□ -1.73
ITGB1-201ENST00000302278 TRAV4A0A0B4J268 109 aa4.25□□□□□ -1.73
ITGB1-201ENST00000302278 FAM25EA8MYX2 175 aa4.25□□□□□ -1.73
ITGB1-201ENST00000302278 C9JCJ5 164 aa4.25□□□□□ -1.73
ITGB1-201ENST00000302278 H3BQ15 152 aa4.25□□□□□ -1.73
ITGB1-201ENST00000302278 LINC00694P0DN24 101 aa4.25□□□□□ -1.73
ITGB1-201ENST00000302278 IAPPP10997 89 aa4.25□□□□□ -1.73
ITGB1-201ENST00000302278 SPXQ9BT56 116 aa4.25□□□□□ -1.73
ITGB1-201ENST00000302278 SCP2D1Q9UJQ7 156 aa4.25□□□□□ -1.73
ITGB1-201ENST00000302278 IL5P05113 134 aa4.25□□□□□ -1.73
ITGB1-201ENST00000302278 OPCMLQ14982 345 aa4.25□□□□□ -1.73
ITGB1-201ENST00000302278 CLLU1Q5K131 121 aa4.25□□□□□ -1.73
ITGB1-201ENST00000302278 Q6AWC8 147 aa4.25□□□□□ -1.73
ITGB1-201ENST00000302278 TEX261Q6UWH6 196 aa4.25□□□□□ -1.73
ITGB1-201ENST00000302278 Q6ZRU5 148 aa4.25□□□□□ -1.73
ITGB1-201ENST00000302278 LINC00305Q7Z4B0 112 aa4.25□□□□□ -1.73
ITGB1-201ENST00000302278 TMEM37Q8WXS4 190 aa4.25□□□□□ -1.73
ITGB1-201ENST00000302278 PTH2Q96A98 100 aa4.25□□□□□ -1.73
ITGB1-201ENST00000302278 TM2D2Q9BX73 214 aa4.25□□□□□ -1.73
ITGB1-201ENST00000302278 GPN1Q9HCN4 374 aaPredicted RBP4.25□□□□□ -1.73
ITGB1-201ENST00000302278 IGHV1OR15-1A0A075B7D0 117 aa4.24□□□□□ -1.73
ITGB1-201ENST00000302278 UBE2MP61081 183 aaKnown RBP4.24□□□□□ -1.73
ITGB1-201ENST00000302278 C21orf62-AS1Q17RA5 79 aa4.24□□□□□ -1.73
ITGB1-201ENST00000302278 VWC2Q2TAL6 325 aa4.24□□□□□ -1.73
ITGB1-201ENST00000302278 LINC00469Q8N7U9 141 aa4.24□□□□□ -1.73
ITGB1-201ENST00000302278 OR2T35Q8NGX2 323 aa4.24□□□□□ -1.73
ITGB1-201ENST00000302278 C8orf49Q96NF6 230 aa4.24□□□□□ -1.73
ITGB1-201ENST00000302278 C12orf57Q99622 126 aa4.24□□□□□ -1.73
ITGB1-201ENST00000302278 TRAV6A0A075B6T7 132 aa4.24□□□□□ -1.73
ITGB1-201ENST00000302278 IGHV3-38A0A0C4DH36 116 aa4.24□□□□□ -1.73
ITGB1-201ENST00000302278 RNF222A6NCQ9 220 aa4.24□□□□□ -1.73
ITGB1-201ENST00000302278 PRAF2O60831 178 aa4.24□□□□□ -1.73
ITGB1-201ENST00000302278 HOXB5P09067 269 aa4.24□□□□□ -1.73
ITGB1-201ENST00000302278 PVALBP20472 110 aaPredicted RBP4.24□□□□□ -1.73
ITGB1-201ENST00000302278 ZNF266Q14584 549 aa4.24□□□□□ -1.73
ITGB1-201ENST00000302278 BAK1Q16611 211 aa4.24□□□□□ -1.73
ITGB1-201ENST00000302278 PAXXQ9BUH6 204 aa4.24□□□□□ -1.73
ITGB1-201ENST00000302278 SRRQ9GZT4 340 aa4.24□□□□□ -1.73
ITGB1-201ENST00000302278 TRBV19A0A075B6N1 114 aa4.23□□□□□ -1.73
ITGB1-201ENST00000302278 RBAKDNA6NC62 111 aa4.23□□□□□ -1.73
ITGB1-201ENST00000302278 NDUFB4O95168 129 aa4.23□□□□□ -1.73
ITGB1-201ENST00000302278 SFT2D2O95562 160 aa4.23□□□□□ -1.73
ITGB1-201ENST00000302278 GATA1P15976 413 aaPredicted RBP4.23□□□□□ -1.73
ITGB1-201ENST00000302278 WFDC2Q14508 124 aa4.23□□□□□ -1.73
ITGB1-201ENST00000302278 PRR9Q5T870 116 aa4.23□□□□□ -1.73
ITGB1-201ENST00000302278 ATRAIDQ6UW56 229 aa4.23□□□□□ -1.73
ITGB1-201ENST00000302278 TOMM5Q8N4H5 51 aa4.23□□□□□ -1.73
ITGB1-201ENST00000302278 FGL1Q08830 312 aa4.23□□□□□ -1.73
ITGB1-201ENST00000302278 ACOT6Q3I5F7 207 aaPredicted RBP4.23□□□□□ -1.73
ITGB1-201ENST00000302278 LINC00518Q8N0U6 118 aa4.23□□□□□ -1.73
ITGB1-201ENST00000302278 ARL6Q9H0F7 186 aa4.23□□□□□ -1.73
ITGB1-201ENST00000302278 ZNF492Q9P255 531 aa4.23□□□□□ -1.73
ITGB1-201ENST00000302278 SMLR1H3BR10 107 aa4.23□□□□□ -1.73
ITGB1-201ENST00000302278 WRBO00258 174 aa4.23□□□□□ -1.73
ITGB1-201ENST00000302278 OR5G3P0C626 314 aa4.23□□□□□ -1.73
ITGB1-201ENST00000302278 GYPEP15421 78 aa4.23□□□□□ -1.73
ITGB1-201ENST00000302278 AP3S2P59780 193 aa4.23□□□□□ -1.73
ITGB1-201ENST00000302278 LELP1Q5T871 98 aa4.23□□□□□ -1.73
ITGB1-201ENST00000302278 CLRN3Q8NCR9 226 aa4.23□□□□□ -1.73
ITGB1-201ENST00000302278 BLNKQ8WV28 456 aa4.23□□□□□ -1.73
ITGB1-201ENST00000302278 PCNPQ8WW12 178 aaKnown RBP4.23□□□□□ -1.73
ITGB1-201ENST00000302278 MGST2Q99735 147 aa4.23□□□□□ -1.73
ITGB1-201ENST00000302278 SLC25A31Q9H0C2 315 aa4.23□□□□□ -1.73
ITGB1-201ENST00000302278 AGPAT4-IT1Q9H0P7 198 aa4.23□□□□□ -1.73
ITGB1-201ENST00000302278 MRPL16Q9NX20 251 aaKnown RBP4.23□□□□□ -1.73
ITGB1-201ENST00000302278 LENEPQ9Y5L5 61 aa4.23□□□□□ -1.73
ITGB1-201ENST00000302278 AGPAT2O15120 278 aa4.22□□□□□ -1.73
ITGB1-201ENST00000302278 RS1O15537 224 aa4.22□□□□□ -1.73
ITGB1-201ENST00000302278 RAB5BP61020 215 aa4.22□□□□□ -1.73
ITGB1-201ENST00000302278 CIRBP-AS1Q8TBR5 109 aa4.22□□□□□ -1.73
ITGB1-201ENST00000302278 DAZAP1Q96EP5 407 aaKnown RBP4.22□□□□□ -1.73
ITGB1-201ENST00000302278 ZNF479Q96JC4 524 aa4.22□□□□□ -1.73
ITGB1-201ENST00000302278 TCEAL7Q9BRU2 100 aa4.22□□□□□ -1.73
ITGB1-201ENST00000302278 COX11Q9Y6N1 276 aa4.22□□□□□ -1.73
ITGB1-201ENST00000302278 PSCAO43653 123 aa4.22□□□□□ -1.73
ITGB1-201ENST00000302278 H2AFB2P0C5Z0 115 aa4.22□□□□□ -1.73
ITGB1-201ENST00000302278 HNRNPA3P51991 378 aaKnown RBP4.22□□□□□ -1.73
ITGB1-201ENST00000302278 SPANXN5Q5MJ07 72 aa4.22□□□□□ -1.73
ITGB1-201ENST00000302278 TMED6Q8WW62 240 aa4.22□□□□□ -1.73
ITGB1-201ENST00000302278 C11orf1Q9H5F2 150 aa4.22□□□□□ -1.73
ITGB1-201ENST00000302278 NUDT15Q9NV35 164 aa4.22□□□□□ -1.73
ITGB1-201ENST00000302278 F8W036 122 aa4.22□□□□□ -1.73
ITGB1-201ENST00000302278 C12orf45Q8N5I9 185 aaPredicted RBP4.22□□□□□ -1.73
ITGB1-201ENST00000302278 SLC25A21Q9BQT8 299 aaPredicted RBP4.22□□□□□ -1.73
ITGB1-201ENST00000302278 DMRTA1Q5VZB9 504 aa4.21□□□□□ -1.73
ITGB1-201ENST00000302278 C10orf113Q5VZT2 155 aa4.21□□□□□ -1.73
ITGB1-201ENST00000302278 OR10P1Q8NGE3 313 aa4.21□□□□□ -1.73
ITGB1-201ENST00000302278 PFDN5Q99471 154 aa4.21□□□□□ -1.73
ITGB1-201ENST00000302278 PSENENQ9NZ42 101 aa4.21□□□□□ -1.73
ITGB1-201ENST00000302278 TRAV8-3A0A0A6YYJ7 113 aa4.21□□□□□ -1.74
ITGB1-201ENST00000302278 TRBV6-4A0A1B0GX49 114 aa4.21□□□□□ -1.74
ITGB1-201ENST00000302278 TEX46H3BTG2 121 aa4.21□□□□□ -1.74
ITGB1-201ENST00000302278 PFN1P07737 140 aaKnown RBP4.21□□□□□ -1.74
ITGB1-201ENST00000302278 ANXA7P20073 488 aaKnown RBP4.21□□□□□ -1.74
ITGB1-201ENST00000302278 OR1L4Q8NGR5 311 aa4.21□□□□□ -1.74
ITGB1-201ENST00000302278 DNAJC4Q9NNZ3 241 aa4.21□□□□□ -1.74
ITGB1-201ENST00000302278 FXYD6-FXYD2A0A087WZ82 144 aa4.21□□□□□ -1.74
ITGB1-201ENST00000302278 TRAV8-6A0A0B4J262 113 aa4.21□□□□□ -1.74
ITGB1-201ENST00000302278 TRGV4A0A0C4DH28 118 aa4.21□□□□□ -1.74
ITGB1-201ENST00000302278 S100A8P05109 93 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms