RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 IGHV4-39P01824 125 aa11.29□□□□□ -0.6
CDT1-201ENST00000301019 NBL1P41271 181 aa11.29□□□□□ -0.6
CDT1-201ENST00000301019 HIGD1BQ9P298 99 aa11.29□□□□□ -0.6
CDT1-201ENST00000301019 IGHV3-66A0A0C4DH42 116 aa11.28□□□□□ -0.6
CDT1-201ENST00000301019 A8MWV9 139 aa11.28□□□□□ -0.6
CDT1-201ENST00000301019 TNFRSF13BO14836 293 aaPredicted RBP11.28□□□□□ -0.6
CDT1-201ENST00000301019 SLC25A16P16260 332 aa11.28□□□□□ -0.6
CDT1-201ENST00000301019 RASL11BQ9BPW5 248 aa11.28□□□□□ -0.6
CDT1-201ENST00000301019 FABP5P3A8MUU1 101 aa11.28□□□□□ -0.6
CDT1-201ENST00000301019 SRRM5B3KS81 715 aa11.28□□□□□ -0.6
CDT1-201ENST00000301019 ERCC8Q13216 396 aa11.28□□□□□ -0.6
CDT1-201ENST00000301019 C6orf15Q6UXA7 325 aaPredicted RBP11.28□□□□□ -0.6
CDT1-201ENST00000301019 NOTCH3Q9UM47 2321 aa11.28□□□□□ -0.6
CDT1-201ENST00000301019 M0QXV9 152 aa11.28□□□□□ -0.6
CDT1-201ENST00000301019 PLGLAQ15195 96 aa11.28□□□□□ -0.6
CDT1-201ENST00000301019 CHCHD5Q9BSY4 110 aa11.28□□□□□ -0.6
CDT1-201ENST00000301019 RAXQ9Y2V3 346 aa11.28□□□□□ -0.6
CDT1-201ENST00000301019 MUC6Q6W4X9 2439 aa11.27□□□□□ -0.6
CDT1-201ENST00000301019 IGHV3-64A0A075B6Q5 118 aa11.27□□□□□ -0.61
CDT1-201ENST00000301019 TMEM78Q5T7P6 136 aa11.27□□□□□ -0.61
CDT1-201ENST00000301019 TEN1Q86WV5 123 aa11.27□□□□□ -0.61
CDT1-201ENST00000301019 SPRR3Q9UBC9 169 aa11.27□□□□□ -0.61
CDT1-201ENST00000301019 M0R1B8 84 aa11.27□□□□□ -0.61
CDT1-201ENST00000301019 PAX8Q06710 450 aa11.27□□□□□ -0.61
CDT1-201ENST00000301019 NTN5Q8WTR8 489 aaPredicted RBP11.26□□□□□ -0.61
CDT1-201ENST00000301019 NGBQ9NPG2 151 aa11.26□□□□□ -0.61
CDT1-201ENST00000301019 VSTM5A8MXK1 200 aa11.26□□□□□ -0.61
CDT1-201ENST00000301019 Q1RN00 199 aa11.26□□□□□ -0.61
CDT1-201ENST00000301019 COL6A6A6NMZ7 2263 aa11.26□□□□□ -0.61
CDT1-201ENST00000301019 TRBV7-3A0A075B6L6 115 aa11.26□□□□□ -0.61
CDT1-201ENST00000301019 MYMXA0A1B0GTQ4 84 aa11.26□□□□□ -0.61
CDT1-201ENST00000301019 LGALS1P09382 135 aaKnown RBP11.26□□□□□ -0.61
CDT1-201ENST00000301019 TMEM95Q3KNT9 176 aa11.26□□□□□ -0.61
CDT1-201ENST00000301019 COL12A1Q99715 3063 aa11.25□□□□□ -0.61
CDT1-201ENST00000301019 CUL9Q8IWT3 2517 aa11.25□□□□□ -0.61
CDT1-201ENST00000301019 ZFHX2Q9C0A1 2572 aaPredicted RBP11.25□□□□□ -0.61
CDT1-201ENST00000301019 CREBBPQ92793 2442 aa11.25□□□□□ -0.61
CDT1-201ENST00000301019 IGHV3-49A0A0A0MS15 119 aa11.25□□□□□ -0.61
CDT1-201ENST00000301019 LOC107984640A0A0U1RRK4 108 aa11.25□□□□□ -0.61
CDT1-201ENST00000301019 TEX49A0A1B0GTD5 131 aa11.25□□□□□ -0.61
CDT1-201ENST00000301019 PRADC1Q9BSG0 188 aa11.25□□□□□ -0.61
CDT1-201ENST00000301019 TRBV19A0A075B6N1 114 aa11.25□□□□□ -0.61
CDT1-201ENST00000301019 IFITM1P13164 125 aa11.25□□□□□ -0.61
CDT1-201ENST00000301019 DTX2Q86UW9 622 aa11.25□□□□□ -0.61
CDT1-201ENST00000301019 SIGLEC15Q6ZMC9 328 aa11.24□□□□□ -0.61
CDT1-201ENST00000301019 PPP1R27Q86WC6 154 aa11.24□□□□□ -0.61
CDT1-201ENST00000301019 RNF185Q96GF1 192 aa11.24□□□□□ -0.61
CDT1-201ENST00000301019 OR4C13Q8NGP0 309 aa11.24□□□□□ -0.61
CDT1-201ENST00000301019 FAM110AQ9BQ89 295 aa11.24□□□□□ -0.61
CDT1-201ENST00000301019 RIF1Q5UIP0 2472 aaKnown RBP11.23□□□□□ -0.61
CDT1-201ENST00000301019 Q6ZS46 218 aa11.23□□□□□ -0.61
CDT1-201ENST00000301019 ZNF292O60281 2723 aa11.23□□□□□ -0.61
CDT1-201ENST00000301019 TRGV5A0A0B4J1U4 118 aa11.22□□□□□ -0.61
CDT1-201ENST00000301019 RPL27AP46776 148 aaKnown RBP11.22□□□□□ -0.61
CDT1-201ENST00000301019 THAP8Q8NA92 274 aa11.22□□□□□ -0.61
CDT1-201ENST00000301019 ZNF493Q6ZR52 646 aa11.22□□□□□ -0.61
CDT1-201ENST00000301019 RNF182Q8N6D2 247 aa11.22□□□□□ -0.61
CDT1-201ENST00000301019 C15orf53Q8NAA6 179 aa11.22□□□□□ -0.61
CDT1-201ENST00000301019 SLC25A20O43772 301 aa11.22□□□□□ -0.61
CDT1-201ENST00000301019 YAE1D1Q9NRH1 226 aa11.22□□□□□ -0.61
CDT1-201ENST00000301019 CGB3P0DN86 165 aa11.21□□□□□ -0.61
CDT1-201ENST00000301019 CGB7P0DN87 165 aa11.21□□□□□ -0.61
CDT1-201ENST00000301019 POU2AF1Q16633 256 aa11.21□□□□□ -0.61
CDT1-201ENST00000301019 OR11H6Q8NGC7 330 aa11.21□□□□□ -0.61
CDT1-201ENST00000301019 SCGB3A1Q96QR1 104 aa11.21□□□□□ -0.61
CDT1-201ENST00000301019 C2CD3Q4AC94 2353 aa11.21□□□□□ -0.62
CDT1-201ENST00000301019 IGHV1-18A0A0C4DH31 117 aa11.21□□□□□ -0.62
CDT1-201ENST00000301019 RAB9BQ9NP90 201 aa11.21□□□□□ -0.62
CDT1-201ENST00000301019 ZNF71Q9NQZ8 489 aaPredicted RBP11.21□□□□□ -0.62
CDT1-201ENST00000301019 KLK5Q9Y337 293 aaPredicted RBP11.21□□□□□ -0.62
CDT1-201ENST00000301019 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.2□□□□□ -0.622e-7■■■■■ 29.6
CDT1-201ENST00000301019 NPC2P61916 151 aa11.2□□□□□ -0.62
CDT1-201ENST00000301019 ZMAT4Q9H898 229 aa11.2□□□□□ -0.62
CDT1-201ENST00000301019 U3KQK5 164 aa11.2□□□□□ -0.62
CDT1-201ENST00000301019 ELANEP08246 267 aa11.2□□□□□ -0.62
CDT1-201ENST00000301019 CCL17Q92583 94 aa11.2□□□□□ -0.62
CDT1-201ENST00000301019 SCNM1Q9BWG6 230 aa11.2□□□□□ -0.62
CDT1-201ENST00000301019 SPTAN1Q13813 2472 aaKnown RBP11.2□□□□□ -0.62
CDT1-201ENST00000301019 DCHS2Q6V1P9 2916 aa11.2□□□□□ -0.62
CDT1-201ENST00000301019 ATP5LO75964 103 aa11.2□□□□□ -0.62
CDT1-201ENST00000301019 IGKV1-17P01599 117 aa11.2□□□□□ -0.62
CDT1-201ENST00000301019 VMA21Q3ZAQ7 101 aa11.2□□□□□ -0.62
CDT1-201ENST00000301019 ASCL5Q7RTU5 278 aa11.2□□□□□ -0.62
CDT1-201ENST00000301019 TRGV9Q99603 122 aa11.2□□□□□ -0.62
CDT1-201ENST00000301019 COX7A1P24310 79 aa11.19□□□□□ -0.62
CDT1-201ENST00000301019 GAFA1Q96PS6 74 aa11.19□□□□□ -0.62
CDT1-201ENST00000301019 RHODO00212 210 aa11.19□□□□□ -0.62
CDT1-201ENST00000301019 TNFAIP6P98066 277 aaPredicted RBP11.19□□□□□ -0.62
CDT1-201ENST00000301019 SORL1Q92673 2214 aa11.18□□□□□ -0.62
CDT1-201ENST00000301019 A0A087WX48 190 aa11.18□□□□□ -0.62
CDT1-201ENST00000301019 LAGE3Q14657 143 aa11.18□□□□□ -0.62
CDT1-201ENST00000301019 ZNF56Q15929 161 aa11.18□□□□□ -0.62
CDT1-201ENST00000301019 TMEM167AQ8TBQ9 72 aa11.18□□□□□ -0.62
CDT1-201ENST00000301019 PRAC2D3DTV9 90 aa11.18□□□□□ -0.62
CDT1-201ENST00000301019 TMEM262E9PQX1 116 aa11.18□□□□□ -0.62
CDT1-201ENST00000301019 M0R381 172 aa11.18□□□□□ -0.62
CDT1-201ENST00000301019 TM4SF5O14894 197 aa11.18□□□□□ -0.62
CDT1-201ENST00000301019 NXT2Q9NPJ8 142 aaKnown RBP11.18□□□□□ -0.62
CDT1-201ENST00000301019 VPREB3Q9UKI3 123 aa11.18□□□□□ -0.62
CDT1-201ENST00000301019 PRR25Q96S07 402 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms