RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 C12orf77C9JDV5 145 aa9.11□□□□□ -0.95
HDGFL3-201ENST00000299633 SIGLEC8Q9NYZ4 499 aa9.11□□□□□ -0.95
HDGFL3-201ENST00000299633 BUB3O43684 328 aa9.11□□□□□ -0.95
HDGFL3-201ENST00000299633 YPEL1O60688 119 aa9.11□□□□□ -0.95
HDGFL3-201ENST00000299633 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.11□□□□□ -0.95
HDGFL3-201ENST00000299633 ZNF497Q6ZNH5 498 aa9.11□□□□□ -0.95
HDGFL3-201ENST00000299633 YPEL2Q96QA6 119 aa9.11□□□□□ -0.95
HDGFL3-201ENST00000299633 GNLYP22749 145 aa9.11□□□□□ -0.95
HDGFL3-201ENST00000299633 PTH2Q96A98 100 aa9.1□□□□□ -0.95
HDGFL3-201ENST00000299633 C18orf32Q8TCD1 76 aa9.1□□□□□ -0.95
HDGFL3-201ENST00000299633 LINC00312Q9Y6C7 94 aa9.1□□□□□ -0.95
HDGFL3-201ENST00000299633 LYRM9A8MSI8 78 aa9.1□□□□□ -0.95
HDGFL3-201ENST00000299633 LINC01590Q5TEZ4 76 aa9.1□□□□□ -0.95
HDGFL3-201ENST00000299633 PCSK5Q92824 1860 aa9.1□□□□□ -0.95
HDGFL3-201ENST00000299633 USP17L23D6RBM5 183 aa9.1□□□□□ -0.95
HDGFL3-201ENST00000299633 Q6ZWC4 215 aa9.1□□□□□ -0.95
HDGFL3-201ENST00000299633 Q8N8P6 123 aa9.1□□□□□ -0.95
HDGFL3-201ENST00000299633 TMEM61Q8N0U2 210 aa9.1□□□□□ -0.95
HDGFL3-201ENST00000299633 Q8TAT8 98 aa9.1□□□□□ -0.95
HDGFL3-201ENST00000299633 CFPP27918 469 aa9.09□□□□□ -0.95
HDGFL3-201ENST00000299633 CR1LQ2VPA4 569 aa9.09□□□□□ -0.95
HDGFL3-201ENST00000299633 J3QQQ9 107 aa9.09□□□□□ -0.95
HDGFL3-201ENST00000299633 HIGD2BQ4VC39 106 aa9.09□□□□□ -0.95
HDGFL3-201ENST00000299633 SIGLEC12Q96PQ1 595 aa9.09□□□□□ -0.95
HDGFL3-201ENST00000299633 NXPH4O95158 308 aa9.09□□□□□ -0.95
HDGFL3-201ENST00000299633 FOXI2Q6ZQN5 318 aa9.09□□□□□ -0.95
HDGFL3-201ENST00000299633 SH2D6Q7Z4S9 175 aa9.09□□□□□ -0.95
HDGFL3-201ENST00000299633 NEU4Q8WWR8 484 aaPredicted RBP9.09□□□□□ -0.95
HDGFL3-201ENST00000299633 C8orf86Q6ZUL3 223 aa9.09□□□□□ -0.95
HDGFL3-201ENST00000299633 NOTCH2Q04721 2471 aa9.09□□□□□ -0.95
HDGFL3-201ENST00000299633 FAM168AQ92567 244 aa9.09□□□□□ -0.95
HDGFL3-201ENST00000299633 NDPQ00604 133 aa9.09□□□□□ -0.95
HDGFL3-201ENST00000299633 WIPF2Q8TF74 440 aaPredicted RBP9.09□□□□□ -0.95
HDGFL3-201ENST00000299633 LGALS9BQ3B8N2 356 aa9.08□□□□□ -0.96
HDGFL3-201ENST00000299633 LGALS9CQ6DKI2 356 aa9.08□□□□□ -0.96
HDGFL3-201ENST00000299633 COX7B2Q8TF08 81 aa9.08□□□□□ -0.96
HDGFL3-201ENST00000299633 MLST8Q9BVC4 326 aa9.08□□□□□ -0.96
HDGFL3-201ENST00000299633 TEN1Q86WV5 123 aa9.08□□□□□ -0.96
HDGFL3-201ENST00000299633 IGHV4OR15-8A0A075B7B6 117 aa9.08□□□□□ -0.96
HDGFL3-201ENST00000299633 A0A087WW49 117 aa9.08□□□□□ -0.96
HDGFL3-201ENST00000299633 FAM166AQ6J272 317 aa9.08□□□□□ -0.96
HDGFL3-201ENST00000299633 TRBV12-3P01733 135 aa9.08□□□□□ -0.96
HDGFL3-201ENST00000299633 CFC1BP0CG36 223 aa9.08□□□□□ -0.96
HDGFL3-201ENST00000299633 CFC1P0CG37 223 aa9.08□□□□□ -0.96
HDGFL3-201ENST00000299633 RMI2Q96E14 147 aa9.08□□□□□ -0.96
HDGFL3-201ENST00000299633 LYPD6Q86Y78 171 aa9.08□□□□□ -0.96
HDGFL3-201ENST00000299633 PNRC2Q9NPJ4 139 aaKnown RBP9.08□□□□□ -0.96
HDGFL3-201ENST00000299633 SPAARA0A1B0GVQ0 90 aa9.08□□□□□ -0.96
HDGFL3-201ENST00000299633 C10orf105Q8TEF2 133 aa9.08□□□□□ -0.96
HDGFL3-201ENST00000299633 UBE2AP49459 152 aa9.07□□□□□ -0.96
HDGFL3-201ENST00000299633 FOXE3Q13461 319 aa9.07□□□□□ -0.96
HDGFL3-201ENST00000299633 SLC25A29Q8N8R3 303 aa9.07□□□□□ -0.96
HDGFL3-201ENST00000299633 NDUFC1O43677 76 aa9.07□□□□□ -0.96
HDGFL3-201ENST00000299633 REPIN1Q9BWE0 567 aaKnown RBP9.07□□□□□ -0.96
HDGFL3-201ENST00000299633 IGLL1P15814 213 aa9.07□□□□□ -0.96
HDGFL3-201ENST00000299633 PRR4Q16378 134 aa9.07□□□□□ -0.96
HDGFL3-201ENST00000299633 LYPD1Q8N2G4 141 aa9.07□□□□□ -0.96
HDGFL3-201ENST00000299633 JMJD7-PLA2G4BH0Y9G9 81 aa9.07□□□□□ -0.96
HDGFL3-201ENST00000299633 ELANEP08246 267 aa9.07□□□□□ -0.96
HDGFL3-201ENST00000299633 SAP30O75446 220 aa9.07□□□□□ -0.96
HDGFL3-201ENST00000299633 TREML4Q6UXN2 200 aa9.07□□□□□ -0.96
HDGFL3-201ENST00000299633 IGKV1D-13A0A0B4J2D9 117 aa9.07□□□□□ -0.96
HDGFL3-201ENST00000299633 ETDCA0A1B0GVM5 59 aa9.07□□□□□ -0.96
HDGFL3-201ENST00000299633 IGKV1-13P0DP09 117 aa9.07□□□□□ -0.96
HDGFL3-201ENST00000299633 HGFACQ04756 655 aa9.07□□□□□ -0.96
HDGFL3-201ENST00000299633 SLC25A45Q8N413 288 aa9.07□□□□□ -0.96
HDGFL3-201ENST00000299633 CRYGSP22914 178 aa9.07□□□□□ -0.96
HDGFL3-201ENST00000299633 CTHRC1Q96CG8 243 aa9.07□□□□□ -0.96
HDGFL3-201ENST00000299633 SMIM27A0A1W2PRY6 76 aa9.07□□□□□ -0.96
HDGFL3-201ENST00000299633 SERTAD4-AS1Q5TG53 156 aa9.07□□□□□ -0.96
HDGFL3-201ENST00000299633 Q86TA4 180 aa9.07□□□□□ -0.96
HDGFL3-201ENST00000299633 J3QW42 95 aa9.06□□□□□ -0.96
HDGFL3-201ENST00000299633 PCOLCEQ15113 449 aa9.06□□□□□ -0.96
HDGFL3-201ENST00000299633 TRAV23DV6A0A075B6W5 121 aa9.06□□□□□ -0.96
HDGFL3-201ENST00000299633 IGLC7A0M8Q6 106 aa9.06□□□□□ -0.96
HDGFL3-201ENST00000299633 H0Y9J4 135 aa9.06□□□□□ -0.96
HDGFL3-201ENST00000299633 RNASE8Q8TDE3 154 aaKnown RBP9.06□□□□□ -0.96
HDGFL3-201ENST00000299633 IGKV1D-8A0A087WSZ0 117 aa9.06□□□□□ -0.96
HDGFL3-201ENST00000299633 TMEM133Q9H2Q1 129 aa9.06□□□□□ -0.96
HDGFL3-201ENST00000299633 CENPVL3A0A0U1RRI6 287 aa9.06□□□□□ -0.96
HDGFL3-201ENST00000299633 PRSS46E5RG02 174 aa9.06□□□□□ -0.96
HDGFL3-201ENST00000299633 IGKV1-5P01602 117 aa9.06□□□□□ -0.96
HDGFL3-201ENST00000299633 IGHV2-5P01817 119 aa9.06□□□□□ -0.96
HDGFL3-201ENST00000299633 H0YGX0 51 aa9.06□□□□□ -0.96
HDGFL3-201ENST00000299633 ARMS2P0C7Q2 107 aa9.05□□□□□ -0.96
HDGFL3-201ENST00000299633 NSUN5P1Q3KNT7 163 aa9.05□□□□□ -0.96
HDGFL3-201ENST00000299633 UQCRQO14949 82 aa9.05□□□□□ -0.96
HDGFL3-201ENST00000299633 MST1LQ2TV78 715 aa9.05□□□□□ -0.96
HDGFL3-201ENST00000299633 MORN2Q502X0 79 aa9.05□□□□□ -0.96
HDGFL3-201ENST00000299633 FAM110AQ9BQ89 295 aa9.05□□□□□ -0.96
HDGFL3-201ENST00000299633 IGHV2OR16-5A0A0B4J2B6 119 aa9.05□□□□□ -0.96
HDGFL3-201ENST00000299633 C2orf66Q6UXQ4 117 aa9.05□□□□□ -0.96
HDGFL3-201ENST00000299633 LYZL4Q96KX0 146 aa9.05□□□□□ -0.96
HDGFL3-201ENST00000299633 MSRB2Q9Y3D2 182 aa9.05□□□□□ -0.96
HDGFL3-201ENST00000299633 IGHV4-4A0A075B6R2 117 aa9.05□□□□□ -0.96
HDGFL3-201ENST00000299633 TRAV4A0A0B4J268 109 aa9.05□□□□□ -0.96
HDGFL3-201ENST00000299633 HOXB4P17483 251 aaPredicted RBP9.05□□□□□ -0.96
HDGFL3-201ENST00000299633 PMAIP1Q13794 54 aa9.05□□□□□ -0.96
HDGFL3-201ENST00000299633 F5H768 121 aa9.05□□□□□ -0.96
HDGFL3-201ENST00000299633 OPRPNQ99935 248 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms