RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 NPIPB6E9PJ23 425 aa10.49□□□□□ -0.73
CTDP1-202ENST00000299543 H3BVH4 76 aa10.49□□□□□ -0.73
CTDP1-202ENST00000299543 MT-ATP8P03928 68 aa10.49□□□□□ -0.73
CTDP1-202ENST00000299543 HERV-K104P63124 156 aa10.49□□□□□ -0.73
CTDP1-202ENST00000299543 SMIM20Q8N5G0 67 aa10.49□□□□□ -0.73
CTDP1-202ENST00000299543 CFHR4Q92496 578 aa10.49□□□□□ -0.73
CTDP1-202ENST00000299543 LOC107984156A0A0G2JMH3 177 aa10.49□□□□□ -0.73
CTDP1-202ENST00000299543 SH2D1AO60880 128 aa10.49□□□□□ -0.73
CTDP1-202ENST00000299543 GAGE13Q4V321 117 aa10.49□□□□□ -0.73
CTDP1-202ENST00000299543 ARL17AQ8IVW1 177 aa10.49□□□□□ -0.73
CTDP1-202ENST00000299543 GLMPQ8WWB7 406 aa10.49□□□□□ -0.73
CTDP1-202ENST00000299543 DKK2Q9UBU2 259 aa10.49□□□□□ -0.73
CTDP1-202ENST00000299543 CSPG4Q6UVK1 2322 aa10.48□□□□□ -0.73
CTDP1-202ENST00000299543 CREBBPQ92793 2442 aa10.48□□□□□ -0.73
CTDP1-202ENST00000299543 PRTN3P24158 256 aa10.48□□□□□ -0.73
CTDP1-202ENST00000299543 ZNF562Q6V9R5 426 aa10.48□□□□□ -0.73
CTDP1-202ENST00000299543 UFC1Q9Y3C8 167 aa10.48□□□□□ -0.73
CTDP1-202ENST00000299543 SCGB1A1P11684 91 aa10.48□□□□□ -0.73
CTDP1-202ENST00000299543 ERCC8Q13216 396 aa10.48□□□□□ -0.73
CTDP1-202ENST00000299543 GTSCR1Q86UQ5 136 aa10.48□□□□□ -0.73
CTDP1-202ENST00000299543 IGHV3OR16-10A0A075B7F0 116 aa10.48□□□□□ -0.73
CTDP1-202ENST00000299543 NBL1P41271 181 aa10.48□□□□□ -0.73
CTDP1-202ENST00000299543 PRELID3AQ96N28 172 aa10.48□□□□□ -0.73
CTDP1-202ENST00000299543 IGKV2D-26A0A0A0MRZ7 120 aa10.47□□□□□ -0.73
CTDP1-202ENST00000299543 ZFP36P26651 326 aaKnown RBP10.47□□□□□ -0.73
CTDP1-202ENST00000299543 CKS2P33552 79 aa10.47□□□□□ -0.73
CTDP1-202ENST00000299543 FHL3Q13643 280 aa10.47□□□□□ -0.73
CTDP1-202ENST00000299543 LY6G5BQ8NDX9 201 aa10.47□□□□□ -0.73
CTDP1-202ENST00000299543 OR11H6Q8NGC7 330 aa10.47□□□□□ -0.73
CTDP1-202ENST00000299543 MRPL16Q9NX20 251 aaKnown RBP10.47□□□□□ -0.73
CTDP1-202ENST00000299543 LINC00527Q9UJ94 153 aa10.47□□□□□ -0.73
CTDP1-202ENST00000299543 IGLV11-55A0A075B6I3 123 aa10.47□□□□□ -0.73
CTDP1-202ENST00000299543 LINC01548A6NM66 108 aa10.47□□□□□ -0.73
CTDP1-202ENST00000299543 RPL7P18124 248 aaKnown RBP10.47□□□□□ -0.73
CTDP1-202ENST00000299543 RNF182Q8N6D2 247 aa10.47□□□□□ -0.73
CTDP1-202ENST00000299543 UBTD1Q9HAC8 227 aa10.46□□□□□ -0.73
CTDP1-202ENST00000299543 MSRB1Q9NZV6 116 aa10.46□□□□□ -0.73
CTDP1-202ENST00000299543 TRBV20-1A0A075B6N2 111 aa10.46□□□□□ -0.73
CTDP1-202ENST00000299543 WI2-2373I1.2A0A1W2PRP0 233 aa10.46□□□□□ -0.73
CTDP1-202ENST00000299543 J3KRW8 73 aa10.46□□□□□ -0.73
CTDP1-202ENST00000299543 CLEC3BP05452 202 aa10.46□□□□□ -0.73
CTDP1-202ENST00000299543 EGR2P11161 476 aaPredicted RBP10.46□□□□□ -0.73
CTDP1-202ENST00000299543 ADORA2A-AS1P86434 159 aa10.46□□□□□ -0.73
CTDP1-202ENST00000299543 BOD1L2Q8IYS8 172 aa10.46□□□□□ -0.73
CTDP1-202ENST00000299543 OR4X2Q8NGF9 303 aa10.46□□□□□ -0.73
CTDP1-202ENST00000299543 C15orf32Q32M92 178 aa10.46□□□□□ -0.74
CTDP1-202ENST00000299543 LYPD1Q8N2G4 141 aa10.46□□□□□ -0.74
CTDP1-202ENST00000299543 HIST1H4GQ99525 98 aa10.46□□□□□ -0.74
CTDP1-202ENST00000299543 SPATA25Q9BR10 227 aa10.46□□□□□ -0.74
CTDP1-202ENST00000299543 TMEM160Q9NX00 188 aa10.46□□□□□ -0.74
CTDP1-202ENST00000299543 A0A096LNJ9 63 aa10.45□□□□□ -0.74
CTDP1-202ENST00000299543 ZNF80P51504 273 aaPredicted RBP10.45□□□□□ -0.74
CTDP1-202ENST00000299543 PTH2Q96A98 100 aa10.45□□□□□ -0.74
CTDP1-202ENST00000299543 G3V318 75 aa10.45□□□□□ -0.74
CTDP1-202ENST00000299543 MRPS12O15235 138 aaKnown RBP10.45□□□□□ -0.74
CTDP1-202ENST00000299543 NDUFA3O95167 84 aa10.45□□□□□ -0.74
CTDP1-202ENST00000299543 CTSGP08311 255 aa10.45□□□□□ -0.74
CTDP1-202ENST00000299543 NPBQ8NG41 125 aa10.45□□□□□ -0.74
CTDP1-202ENST00000299543 SIGLEC8Q9NYZ4 499 aa10.45□□□□□ -0.74
CTDP1-202ENST00000299543 F8W735 103 aaPredicted RBP10.45□□□□□ -0.74
CTDP1-202ENST00000299543 CLEC19AQ6UXS0 136 aa10.45□□□□□ -0.74
CTDP1-202ENST00000299543 C3orf56Q8N813 242 aa10.45□□□□□ -0.74
CTDP1-202ENST00000299543 OR9G4Q8NGQ1 327 aa10.45□□□□□ -0.74
CTDP1-202ENST00000299543 PRR25Q96S07 402 aa10.45□□□□□ -0.74
CTDP1-202ENST00000299543 ORMDL3Q8N138 153 aa10.44□□□□□ -0.74
CTDP1-202ENST00000299543 CHAC1Q9BUX1 264 aa10.44□□□□□ -0.74
CTDP1-202ENST00000299543 HOXB4P17483 251 aaPredicted RBP10.44□□□□□ -0.74
CTDP1-202ENST00000299543 IGHV7-81A0A0B4J1V7 117 aa10.43□□□□□ -0.74
CTDP1-202ENST00000299543 A0A1B0GW15 77 aa10.43□□□□□ -0.74
CTDP1-202ENST00000299543 PRAC2D3DTV9 90 aa10.43□□□□□ -0.74
CTDP1-202ENST00000299543 M0R1W7 72 aa10.43□□□□□ -0.74
CTDP1-202ENST00000299543 EVI2AP22794 236 aa10.43□□□□□ -0.74
CTDP1-202ENST00000299543 MRPL51Q4U2R6 128 aaKnown RBP10.43□□□□□ -0.74
CTDP1-202ENST00000299543 IFI27L1Q96BM0 104 aa10.43□□□□□ -0.74
CTDP1-202ENST00000299543 DOPEY2Q9Y3R5 2298 aa10.43□□□□□ -0.74
CTDP1-202ENST00000299543 CYSLTR1Q9Y271 337 aa10.43□□□□□ -0.74
CTDP1-202ENST00000299543 FAM104BQ5XKR9 115 aa10.43□□□□□ -0.74
CTDP1-202ENST00000299543 C8orf86Q6ZUL3 223 aa10.43□□□□□ -0.74
CTDP1-202ENST00000299543 TMEM219Q86XT9 240 aa10.43□□□□□ -0.74
CTDP1-202ENST00000299543 PSMB2P49721 201 aa10.42□□□□□ -0.74
CTDP1-202ENST00000299543 XGP55808 180 aa10.42□□□□□ -0.74
CTDP1-202ENST00000299543 TCTEX1D4Q5JR98 221 aa10.42□□□□□ -0.74
CTDP1-202ENST00000299543 SMAD5-AS1Q9Y6J3 95 aa10.42□□□□□ -0.74
CTDP1-202ENST00000299543 NPYP01303 97 aa10.42□□□□□ -0.74
CTDP1-202ENST00000299543 PDE6HQ13956 83 aa10.42□□□□□ -0.74
CTDP1-202ENST00000299543 TTC9CQ8N5M4 171 aa10.42□□□□□ -0.74
CTDP1-202ENST00000299543 PGPEP1Q9NXJ5 209 aa10.42□□□□□ -0.74
CTDP1-202ENST00000299543 A0A1W2PPR1 153 aa10.42□□□□□ -0.74
CTDP1-202ENST00000299543 PRSS29PA6NIE9 313 aa10.42□□□□□ -0.74
CTDP1-202ENST00000299543 A6NJY4 79 aa10.42□□□□□ -0.74
CTDP1-202ENST00000299543 ODF3BA8MYP8 253 aa10.42□□□□□ -0.74
CTDP1-202ENST00000299543 ATP6V0E1O15342 81 aa10.42□□□□□ -0.74
CTDP1-202ENST00000299543 BRI3O95415 125 aa10.42□□□□□ -0.74
CTDP1-202ENST00000299543 LY6DQ14210 128 aa10.42□□□□□ -0.74
CTDP1-202ENST00000299543 IGKV3-7A0A075B6H7 116 aa10.41□□□□□ -0.74
CTDP1-202ENST00000299543 F8W1H4 67 aa10.41□□□□□ -0.74
CTDP1-202ENST00000299543 OVOL3O00110 214 aa10.41□□□□□ -0.74
CTDP1-202ENST00000299543 GAS8-AS1O95177 125 aa10.41□□□□□ -0.74
CTDP1-202ENST00000299543 KLRB1Q12918 225 aa10.41□□□□□ -0.74
CTDP1-202ENST00000299543 Q6AWC8 147 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms