RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 LINC00467Q9BRT7 94 aa6.28□□□□□ -1.4
CNOT9-202ENST00000295701 HHLA3Q9XRX5 114 aa6.28□□□□□ -1.4
CNOT9-202ENST00000295701 WDR83OSQ9Y284 106 aa6.28□□□□□ -1.4
CNOT9-202ENST00000295701 UBE2L5PA0A1B0GUS4 154 aa6.27□□□□□ -1.41
CNOT9-202ENST00000295701 IGSF23A1L1A6 192 aa6.27□□□□□ -1.41
CNOT9-202ENST00000295701 NAP1L6A6NFF2 107 aa6.27□□□□□ -1.41
CNOT9-202ENST00000295701 CCDC160A6NGH7 325 aa6.27□□□□□ -1.41
CNOT9-202ENST00000295701 FAM25EA8MYX2 175 aa6.27□□□□□ -1.41
CNOT9-202ENST00000295701 ZNF253O75346 499 aa6.27□□□□□ -1.41
CNOT9-202ENST00000295701 GPX1P07203 203 aa6.27□□□□□ -1.41
CNOT9-202ENST00000295701 SFTA3P0C7M3 94 aa6.27□□□□□ -1.41
CNOT9-202ENST00000295701 RAB31Q13636 194 aa6.27□□□□□ -1.41
CNOT9-202ENST00000295701 TRIQKQ629K1 86 aa6.27□□□□□ -1.41
CNOT9-202ENST00000295701 FAM122CQ6P4D5 195 aa6.27□□□□□ -1.41
CNOT9-202ENST00000295701 OR1L4Q8NGR5 311 aa6.27□□□□□ -1.41
CNOT9-202ENST00000295701 FRZBQ92765 325 aa6.27□□□□□ -1.41
CNOT9-202ENST00000295701 MRPL53Q96EL3 112 aaKnown RBP6.27□□□□□ -1.41
CNOT9-202ENST00000295701 SLC39A9Q9NUM3 307 aa6.27□□□□□ -1.41
CNOT9-202ENST00000295701 UQCC1Q9NVA1 299 aa6.27□□□□□ -1.41
CNOT9-202ENST00000295701 PTTG2Q9NZH5 202 aa6.27□□□□□ -1.41
CNOT9-202ENST00000295701 PRO0255Q9UI72 69 aa6.27□□□□□ -1.41
CNOT9-202ENST00000295701 TMA7Q9Y2S6 64 aaKnown RBP6.27□□□□□ -1.41
CNOT9-202ENST00000295701 TIMM9Q9Y5J7 89 aa6.27□□□□□ -1.41
CNOT9-202ENST00000295701 IGHV1OR15-1A0A075B7D0 117 aa6.26□□□□□ -1.41
CNOT9-202ENST00000295701 IFNA5P01569 189 aa6.26□□□□□ -1.41
CNOT9-202ENST00000295701 HIST1H1EP10412 219 aaKnown RBP6.26□□□□□ -1.41
CNOT9-202ENST00000295701 CRISP2P16562 243 aa6.26□□□□□ -1.41
CNOT9-202ENST00000295701 RPL29P47914 159 aaKnown RBP6.26□□□□□ -1.41
CNOT9-202ENST00000295701 CAV2P51636 162 aa6.26□□□□□ -1.41
CNOT9-202ENST00000295701 BAXQ07812 192 aa6.26□□□□□ -1.41
CNOT9-202ENST00000295701 MRPL23Q16540 153 aaKnown RBP6.26□□□□□ -1.41
CNOT9-202ENST00000295701 SPANXN2Q5MJ10 180 aa6.26□□□□□ -1.41
CNOT9-202ENST00000295701 MUC21Q5SSG8 566 aa6.26□□□□□ -1.41
CNOT9-202ENST00000295701 C9orf47Q6ZRZ4 202 aa6.26□□□□□ -1.41
CNOT9-202ENST00000295701 ZNF479Q96JC4 524 aa6.26□□□□□ -1.41
CNOT9-202ENST00000295701 SEC22CQ9BRL7 303 aa6.26□□□□□ -1.41
CNOT9-202ENST00000295701 SLC25A2Q9BXI2 301 aa6.26□□□□□ -1.41
CNOT9-202ENST00000295701 MRPL32Q9BYC8 188 aaKnown RBP6.26□□□□□ -1.41
CNOT9-202ENST00000295701 TMEM14CQ9P0S9 112 aa6.26□□□□□ -1.41
CNOT9-202ENST00000295701 LOC100131303A0A0U1RQF7 123 aa6.25□□□□□ -1.41
CNOT9-202ENST00000295701 C5orf51A6NDU8 294 aa6.25□□□□□ -1.41
CNOT9-202ENST00000295701 K7EQD1 137 aa6.25□□□□□ -1.41
CNOT9-202ENST00000295701 PLA2G10O15496 165 aa6.25□□□□□ -1.41
CNOT9-202ENST00000295701 FGF7P21781 194 aa6.25□□□□□ -1.41
CNOT9-202ENST00000295701 GCSHP23434 173 aa6.25□□□□□ -1.41
CNOT9-202ENST00000295701 VWC2Q2TAL6 325 aa6.25□□□□□ -1.41
CNOT9-202ENST00000295701 IBA57Q5T440 356 aaKnown RBP6.25□□□□□ -1.41
CNOT9-202ENST00000295701 MIR17HGQ75NE6 70 aa6.25□□□□□ -1.41
CNOT9-202ENST00000295701 NEGR1Q7Z3B1 354 aa6.25□□□□□ -1.41
CNOT9-202ENST00000295701 NFE4Q86UQ8 179 aa6.25□□□□□ -1.41
CNOT9-202ENST00000295701 Q8TAT8 98 aa6.25□□□□□ -1.41
CNOT9-202ENST00000295701 FAM167A-AS1Q96KT0 104 aa6.25□□□□□ -1.41
CNOT9-202ENST00000295701 PFDN5Q99471 154 aa6.25□□□□□ -1.41
CNOT9-202ENST00000295701 C20orf85Q9H1P6 137 aa6.25□□□□□ -1.41
CNOT9-202ENST00000295701 MSRB1Q9NZV6 116 aa6.25□□□□□ -1.41
CNOT9-202ENST00000295701 ZNF492Q9P255 531 aa6.25□□□□□ -1.41
CNOT9-202ENST00000295701 PRELID1Q9Y255 219 aa6.25□□□□□ -1.41
CNOT9-202ENST00000295701 LY96Q9Y6Y9 160 aa6.25□□□□□ -1.41
CNOT9-202ENST00000295701 PKHD1L1Q86WI1 4243 aa6.24□□□□□ -1.41
CNOT9-202ENST00000295701 FAT3Q8TDW7 4589 aa6.24□□□□□ -1.41
CNOT9-202ENST00000295701 TRAV6A0A075B6T7 132 aa6.24□□□□□ -1.41
CNOT9-202ENST00000295701 TRGV4A0A0C4DH28 118 aa6.24□□□□□ -1.41
CNOT9-202ENST00000295701 IL7P13232 177 aa6.24□□□□□ -1.41
CNOT9-202ENST00000295701 GYPEP15421 78 aa6.24□□□□□ -1.41
CNOT9-202ENST00000295701 SLAQ13239 276 aa6.24□□□□□ -1.41
CNOT9-202ENST00000295701 RAB32Q13637 225 aa6.24□□□□□ -1.41
CNOT9-202ENST00000295701 ZNF846Q147U1 533 aa6.24□□□□□ -1.41
CNOT9-202ENST00000295701 TMEM78Q5T7P6 136 aa6.24□□□□□ -1.41
CNOT9-202ENST00000295701 C12orf45Q8N5I9 185 aaPredicted RBP6.24□□□□□ -1.41
CNOT9-202ENST00000295701 TMEM252Q8N6L7 170 aa6.24□□□□□ -1.41
CNOT9-202ENST00000295701 C2orf50Q96LR7 162 aa6.24□□□□□ -1.41
CNOT9-202ENST00000295701 ARPC5LQ9BPX5 153 aa6.24□□□□□ -1.41
CNOT9-202ENST00000295701 RBM38Q9H0Z9 239 aaKnown RBP6.24□□□□□ -1.41
CNOT9-202ENST00000295701 LRP1Q07954 4544 aaKnown RBP6.23□□□□□ -1.41
CNOT9-202ENST00000295701 TRAV9-2A0A087WT02 112 aa6.23□□□□□ -1.41
CNOT9-202ENST00000295701 LRCOL1A6NCL2 159 aa6.23□□□□□ -1.41
CNOT9-202ENST00000295701 CENPXA8MT69 81 aa6.23□□□□□ -1.41
CNOT9-202ENST00000295701 SLPIP03973 132 aa6.23□□□□□ -1.41
CNOT9-202ENST00000295701 NMBP08949 121 aa6.23□□□□□ -1.41
CNOT9-202ENST00000295701 OR10J4P0C629 311 aa6.23□□□□□ -1.41
CNOT9-202ENST00000295701 NBEAP1P0C6P0 100 aa6.23□□□□□ -1.41
CNOT9-202ENST00000295701 S100A11P31949 105 aa6.23□□□□□ -1.41
CNOT9-202ENST00000295701 SULT1A1P50225 295 aa6.23□□□□□ -1.41
CNOT9-202ENST00000295701 ZNF138P52744 262 aa6.23□□□□□ -1.41
CNOT9-202ENST00000295701 S100A10P60903 97 aa6.23□□□□□ -1.41
CNOT9-202ENST00000295701 ZNF415Q09FC8 603 aa6.23□□□□□ -1.41
CNOT9-202ENST00000295701 IL15RAQ13261 267 aa6.23□□□□□ -1.41
CNOT9-202ENST00000295701 PDE6HQ13956 83 aa6.23□□□□□ -1.41
CNOT9-202ENST00000295701 CHAC2Q8WUX2 184 aa6.23□□□□□ -1.41
CNOT9-202ENST00000295701 PHYHIPLQ96FC7 376 aa6.23□□□□□ -1.41
CNOT9-202ENST00000295701 AAMDCQ9H7C9 122 aa6.23□□□□□ -1.41
CNOT9-202ENST00000295701 LYRM2Q9NU23 88 aaPredicted RBP6.23□□□□□ -1.41
CNOT9-202ENST00000295701 FAM30AQ9NZY2 134 aa6.23□□□□□ -1.41
CNOT9-202ENST00000295701 TCRBP04435 133 aa6.22□□□□□ -1.41
CNOT9-202ENST00000295701 CRYGDP07320 174 aa6.22□□□□□ -1.41
CNOT9-202ENST00000295701 EVI2AP22794 236 aa6.22□□□□□ -1.41
CNOT9-202ENST00000295701 SRIP30626 198 aa6.22□□□□□ -1.41
CNOT9-202ENST00000295701 NHLH2Q02577 135 aa6.22□□□□□ -1.41
CNOT9-202ENST00000295701 TMEM183BQ1AE95 376 aa6.22□□□□□ -1.41
CNOT9-202ENST00000295701 IQCF2Q8IXL9 164 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms