RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 C8orf86Q6ZUL3 223 aa7.97□□□□□ -1.13
LMX1A-201ENST00000294816 CFHR4Q92496 578 aa7.97□□□□□ -1.13
LMX1A-201ENST00000294816 VKORC1Q9BQB6 163 aa7.97□□□□□ -1.13
LMX1A-201ENST00000294816 HIF1ANQ9NWT6 349 aa7.97□□□□□ -1.13
LMX1A-201ENST00000294816 A0A087WX48 190 aa7.97□□□□□ -1.13
LMX1A-201ENST00000294816 IGHV3-49A0A0A0MS15 119 aa7.97□□□□□ -1.13
LMX1A-201ENST00000294816 SPRY2O43597 315 aa7.97□□□□□ -1.13
LMX1A-201ENST00000294816 SRSF1Q07955 248 aaKnown RBP eCLIP7.97□□□□□ -1.13
LMX1A-201ENST00000294816 DEFB104AQ8WTQ1 72 aa7.97□□□□□ -1.13
LMX1A-201ENST00000294816 C21orf62Q9NYP8 219 aa7.97□□□□□ -1.13
LMX1A-201ENST00000294816 RALYQ9UKM9 306 aaKnown RBP7.97□□□□□ -1.13
LMX1A-201ENST00000294816 RAXQ9Y2V3 346 aa7.97□□□□□ -1.13
LMX1A-201ENST00000294816 MED13LQ71F56 2210 aa7.97□□□□□ -1.13
LMX1A-201ENST00000294816 IGLV1-47P01700 117 aa7.97□□□□□ -1.13
LMX1A-201ENST00000294816 FOXI1Q12951 378 aa7.97□□□□□ -1.13
LMX1A-201ENST00000294816 TAL2Q16559 108 aa7.97□□□□□ -1.13
LMX1A-201ENST00000294816 NUP37Q8NFH4 326 aa7.97□□□□□ -1.13
LMX1A-201ENST00000294816 ARHGAP32A7KAX9 2087 aa7.96□□□□□ -1.13
LMX1A-201ENST00000294816 MYMXA0A1B0GTQ4 84 aa7.96□□□□□ -1.13
LMX1A-201ENST00000294816 VSTM5A8MXK1 200 aa7.96□□□□□ -1.13
LMX1A-201ENST00000294816 HLA-DRB4P13762 266 aa7.96□□□□□ -1.13
LMX1A-201ENST00000294816 SCGB3A1Q96QR1 104 aa7.96□□□□□ -1.13
LMX1A-201ENST00000294816 PRO0461Q9UI25 63 aa7.96□□□□□ -1.13
LMX1A-201ENST00000294816 HLA-DRB4X5D2U9 266 aa7.96□□□□□ -1.13
LMX1A-201ENST00000294816 NBR2O15453 112 aa7.96□□□□□ -1.14
LMX1A-201ENST00000294816 TCTEX1D4Q5JR98 221 aa7.96□□□□□ -1.14
LMX1A-201ENST00000294816 SVIPQ8NHG7 77 aa7.96□□□□□ -1.14
LMX1A-201ENST00000294816 DLX4Q92988 240 aaPredicted RBP7.96□□□□□ -1.14
LMX1A-201ENST00000294816 RNASE6Q93091 150 aaKnown RBP7.96□□□□□ -1.14
LMX1A-201ENST00000294816 ZNF815PA8K554 130 aa7.96□□□□□ -1.14
LMX1A-201ENST00000294816 PLNP26678 52 aa7.96□□□□□ -1.14
LMX1A-201ENST00000294816 C1QTNF4Q9BXJ3 329 aa7.96□□□□□ -1.14
LMX1A-201ENST00000294816 TRBV7-3A0A075B6L6 115 aa7.95□□□□□ -1.14
LMX1A-201ENST00000294816 TMEM78Q5T7P6 136 aa7.95□□□□□ -1.14
LMX1A-201ENST00000294816 ZFP2Q6ZN57 461 aa7.95□□□□□ -1.14
LMX1A-201ENST00000294816 H7C1H1 209 aa7.95□□□□□ -1.14
LMX1A-201ENST00000294816 C3orf36Q3SXR2 165 aa7.95□□□□□ -1.14
LMX1A-201ENST00000294816 F8VRH5 84 aa7.94□□□□□ -1.14
LMX1A-201ENST00000294816 MORN3Q6PF18 240 aaPredicted RBP7.94□□□□□ -1.14
LMX1A-201ENST00000294816 SMAD5-AS1Q9Y6J3 95 aa7.94□□□□□ -1.14
LMX1A-201ENST00000294816 SPENQ96T58 3664 aaKnown RBP7.94□□□□□ -1.14
LMX1A-201ENST00000294816 ABCA4P78363 2273 aa7.94□□□□□ -1.14
LMX1A-201ENST00000294816 SCGB1C2P0DMR2 95 aa7.94□□□□□ -1.14
LMX1A-201ENST00000294816 ARL3P36405 182 aa7.94□□□□□ -1.14
LMX1A-201ENST00000294816 KLRD1Q13241 179 aa7.94□□□□□ -1.14
LMX1A-201ENST00000294816 LINC01559Q495D7 138 aa7.94□□□□□ -1.14
LMX1A-201ENST00000294816 Q6ZQT7 251 aa7.94□□□□□ -1.14
LMX1A-201ENST00000294816 PRADC1Q9BSG0 188 aa7.94□□□□□ -1.14
LMX1A-201ENST00000294816 ADGRG4Q8IZF6 3080 aa7.94□□□□□ -1.14
LMX1A-201ENST00000294816 TNRC18O15417 2968 aaPredicted RBP7.94□□□□□ -1.14
LMX1A-201ENST00000294816 IGKV3D-20A0A0C4DH25 116 aa7.94□□□□□ -1.14
LMX1A-201ENST00000294816 LGALS1P09382 135 aaKnown RBP7.94□□□□□ -1.14
LMX1A-201ENST00000294816 EMP1P54849 157 aa7.94□□□□□ -1.14
LMX1A-201ENST00000294816 NFE4Q86UQ8 179 aa7.94□□□□□ -1.14
LMX1A-201ENST00000294816 TMEM190Q8WZ59 177 aa7.94□□□□□ -1.14
LMX1A-201ENST00000294816 FANCD2OSQ96PS1 177 aa7.94□□□□□ -1.14
LMX1A-201ENST00000294816 APC2O95996 2303 aa7.94□□□□□ -1.14
LMX1A-201ENST00000294816 M0R381 172 aa7.93□□□□□ -1.14
LMX1A-201ENST00000294816 SLC25A16P16260 332 aa7.93□□□□□ -1.14
LMX1A-201ENST00000294816 XGP55808 180 aa7.93□□□□□ -1.14
LMX1A-201ENST00000294816 IGFL2Q6UWQ7 119 aa7.93□□□□□ -1.14
LMX1A-201ENST00000294816 DEFB123Q8N688 67 aa7.93□□□□□ -1.14
LMX1A-201ENST00000294816 CDIP1Q9H305 208 aa7.93□□□□□ -1.14
LMX1A-201ENST00000294816 C11orf21Q9P2W6 132 aa7.93□□□□□ -1.14
LMX1A-201ENST00000294816 IGLV2-18A0A075B6J9 118 aa7.93□□□□□ -1.14
LMX1A-201ENST00000294816 TMEM238LA0A1B0GVL6 79 aa7.93□□□□□ -1.14
LMX1A-201ENST00000294816 A6NJY4 79 aa7.93□□□□□ -1.14
LMX1A-201ENST00000294816 TNFRSF13BO14836 293 aaPredicted RBP7.93□□□□□ -1.14
LMX1A-201ENST00000294816 IGHG4P01861 327 aa7.93□□□□□ -1.14
LMX1A-201ENST00000294816 THBDP07204 575 aa7.93□□□□□ -1.14
LMX1A-201ENST00000294816 MGPP08493 103 aa7.93□□□□□ -1.14
LMX1A-201ENST00000294816 SMCPP49901 116 aaPredicted RBP7.93□□□□□ -1.14
LMX1A-201ENST00000294816 KLHL30-AS1Q8NEE0 82 aa7.93□□□□□ -1.14
LMX1A-201ENST00000294816 RNF183Q96D59 192 aa7.93□□□□□ -1.14
LMX1A-201ENST00000294816 LINC01548A6NM66 108 aa7.93□□□□□ -1.14
LMX1A-201ENST00000294816 ZNF575Q86XF7 245 aa7.93□□□□□ -1.14
LMX1A-201ENST00000294816 PLEKHB2Q96CS7 222 aa7.93□□□□□ -1.14
LMX1A-201ENST00000294816 ZNF48Q96MX3 618 aaPredicted RBP7.93□□□□□ -1.14
LMX1A-201ENST00000294816 MGAQ8IWI9 3026 aa7.92□□□□□ -1.14
LMX1A-201ENST00000294816 SCGB2A1O75556 95 aa7.92□□□□□ -1.14
LMX1A-201ENST00000294816 GATA3P23771 443 aa7.92□□□□□ -1.14
LMX1A-201ENST00000294816 CFAP126Q5VTH2 177 aa7.92□□□□□ -1.14
LMX1A-201ENST00000294816 Q6ZUT4 128 aa7.92□□□□□ -1.14
LMX1A-201ENST00000294816 NRACQ8N912 160 aa7.92□□□□□ -1.14
LMX1A-201ENST00000294816 KAAG1Q9UBP8 84 aa7.92□□□□□ -1.14
LMX1A-201ENST00000294816 ANAPC13Q9BS18 74 aa7.92□□□□□ -1.14
LMX1A-201ENST00000294816 SS18L2Q9UHA2 77 aa7.92□□□□□ -1.14
LMX1A-201ENST00000294816 IGLV11-55A0A075B6I3 123 aa7.91□□□□□ -1.14
LMX1A-201ENST00000294816 PRSS29PA6NIE9 313 aa7.91□□□□□ -1.14
LMX1A-201ENST00000294816 NDPQ00604 133 aa7.91□□□□□ -1.14
LMX1A-201ENST00000294816 CNFNQ9BYD5 112 aa7.91□□□□□ -1.14
LMX1A-201ENST00000294816 AGPAT4-IT1Q9H0P7 198 aa7.91□□□□□ -1.14
LMX1A-201ENST00000294816 LINC01546A6NGU7 62 aa7.91□□□□□ -1.14
LMX1A-201ENST00000294816 F8W735 103 aaPredicted RBP7.91□□□□□ -1.14
LMX1A-201ENST00000294816 H7C2G1 150 aa7.91□□□□□ -1.14
LMX1A-201ENST00000294816 TSPAN13O95857 204 aa7.91□□□□□ -1.14
LMX1A-201ENST00000294816 FHL3Q13643 280 aa7.91□□□□□ -1.14
LMX1A-201ENST00000294816 C5orf64Q2M2E5 130 aa7.91□□□□□ -1.14
LMX1A-201ENST00000294816 DEFB124Q8NES8 71 aa7.91□□□□□ -1.14
LMX1A-201ENST00000294816 SRSF8Q9BRL6 282 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms