RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 PRR20DP86480 221 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 PRR20BP86481 221 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 PRR20AP86496 221 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 CDSNQ15517 529 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 OR11H1Q8NG94 326 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 OR11H2Q8NH07 326 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 COPS9Q8WXC6 57 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 Q96MF0 132 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 FN1P02751 2386 aaKnown RBP3.77□□□□□ -1.81
UBR1-201ENST00000290650 CENPEQ02224 2701 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 IGHV2-70DA0A0C4DH43 119 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 SYS1-DBNDD2H3BUS1 97 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 SMIM13P0DJ93 91 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 NBL1P41271 181 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 COA6Q5JTJ3 125 aaKnown RBP3.77□□□□□ -1.81
UBR1-201ENST00000290650 STHQ8IWL8 128 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 BCL6BQ8N143 479 aaPredicted RBP3.77□□□□□ -1.81
UBR1-201ENST00000290650 TP73-AS1Q9UF72 201 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 NAV2Q8IVL1 2488 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 TRGV2A0A075B6R0 118 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 ITGB1BP1O14713 200 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 TEX29Q8N6K0 151 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 TRAV21A0A0B4J279 112 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 IGHV1-24A0A0C4DH33 117 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 TMEM8BA6NDV4 472 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 LINC01548A6NM66 108 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 SCGB1A1P11684 91 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 RAB9AP51151 201 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 DAZAP2Q15038 168 aaPredicted RBP3.77□□□□□ -1.81
UBR1-201ENST00000290650 MEIG1Q5JSS6 88 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 C8orf86Q6ZUL3 223 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 DYNAPQ8N1N2 210 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 AGRNO00468 2067 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 TNRC6BQ9UPQ9 1833 aaKnown RBP3.77□□□□□ -1.81
UBR1-201ENST00000290650 KALRNO60229 2985 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 TRAV9-1A0A075B6T8 112 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 IGHV4-30-2A0A087WSY4 118 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 IGHV4-61A0A0C4DH41 118 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 TSPAN13O95857 204 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 IGHV4-59P01825 116 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 HIST2H2BCQ6DN03 193 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 PRSS22Q9GZN4 317 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 MSRB1Q9NZV6 116 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 TRAV2A0A0B4J234 112 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 IGHV3-38A0A0C4DH36 116 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 SAP30O75446 220 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 PPP1R17O96001 155 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 IGHV4-39P01824 125 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 MSMBP08118 114 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 C19orf54Q5BKX5 351 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 MINOS1Q5TGZ0 78 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 ZNF491Q8N8L2 437 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 MRAP2Q96G30 205 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 SLC50A1Q9BRV3 221 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 CSTL1Q9H114 145 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 ST20Q9HBF5 79 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 MINOS1-NBL1R4GNA1 71 aa3.77□□□□□ -1.81
UBR1-201ENST00000290650 COL12A1Q99715 3063 aa3.76□□□□□ -1.81
UBR1-201ENST00000290650 MRPL52Q86TS9 123 aaKnown RBP3.76□□□□□ -1.81
UBR1-201ENST00000290650 C20orf144Q9BQM9 153 aa3.76□□□□□ -1.81
UBR1-201ENST00000290650 SMIM27A0A1W2PRY6 76 aa3.76□□□□□ -1.81
UBR1-201ENST00000290650 GNRH2O43555 120 aa3.76□□□□□ -1.81
UBR1-201ENST00000290650 IGKCP01834 107 aa3.76□□□□□ -1.81
UBR1-201ENST00000290650 YPEL3P61236 119 aaPredicted RBP3.76□□□□□ -1.81
UBR1-201ENST00000290650 MRPL51Q4U2R6 128 aaKnown RBP3.76□□□□□ -1.81
UBR1-201ENST00000290650 MEGF9Q9H1U4 602 aa3.76□□□□□ -1.81
UBR1-201ENST00000290650 CHTOPQ9Y3Y2 248 aaKnown RBP3.76□□□□□ -1.81
UBR1-201ENST00000290650 TRBV7-1A0A0A6YYK4 115 aa3.76□□□□□ -1.81
UBR1-201ENST00000290650 IGHV1-69DA0A0B4J2H0 117 aa3.76□□□□□ -1.81
UBR1-201ENST00000290650 B4DSR2 109 aa3.76□□□□□ -1.81
UBR1-201ENST00000290650 C19orf84I3L1E1 186 aa3.76□□□□□ -1.81
UBR1-201ENST00000290650 TRBV12-3P01733 135 aa3.76□□□□□ -1.81
UBR1-201ENST00000290650 IGHV1-69P01742 117 aa3.76□□□□□ -1.81
UBR1-201ENST00000290650 UBE2E1P51965 193 aa3.76□□□□□ -1.81
UBR1-201ENST00000290650 XCL2Q9UBD3 114 aa3.76□□□□□ -1.81
UBR1-201ENST00000290650 JMJD1CQ15652 2540 aa3.76□□□□□ -1.81
UBR1-201ENST00000290650 ADGRG4Q8IZF6 3080 aa3.76□□□□□ -1.81
UBR1-201ENST00000290650 EGR2P11161 476 aaPredicted RBP3.76□□□□□ -1.81
UBR1-201ENST00000290650 DEFB131AP59861 70 aa3.76□□□□□ -1.81
UBR1-201ENST00000290650 LAGE3Q14657 143 aa3.76□□□□□ -1.81
UBR1-201ENST00000290650 SPCS1Q9Y6A9 102 aa3.76□□□□□ -1.81
UBR1-201ENST00000290650 HIVEP2P31629 2446 aa3.76□□□□□ -1.81
UBR1-201ENST00000290650 PRAC2D3DTV9 90 aa3.76□□□□□ -1.81
UBR1-201ENST00000290650 IGLV2-23P01705 113 aa3.76□□□□□ -1.81
UBR1-201ENST00000290650 CYSLTR1Q9Y271 337 aa3.76□□□□□ -1.81
UBR1-201ENST00000290650 NPIPB6E9PJ23 425 aa3.76□□□□□ -1.81
UBR1-201ENST00000290650 HOXA3O43365 443 aaPredicted RBP3.76□□□□□ -1.81
UBR1-201ENST00000290650 DPM2O94777 84 aa3.76□□□□□ -1.81
UBR1-201ENST00000290650 SRSF1Q07955 248 aaKnown RBP eCLIP3.76□□□□□ -1.813e-6■■■■□ 22.2
UBR1-201ENST00000290650 Q8N7P7 452 aa3.76□□□□□ -1.81
UBR1-201ENST00000290650 ZNF815PA8K554 130 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 H3BRN7 92 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 TNFRSF6BO95407 300 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 ZNF876PQ49A33 203 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 ATP5L2Q7Z4Y8 100 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 BOD1L2Q8IYS8 172 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 CHCHD1Q96BP2 118 aaKnown RBP3.75□□□□□ -1.81
UBR1-201ENST00000290650 NPYP01303 97 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 IGLL1P15814 213 aa3.75□□□□□ -1.81
UBR1-201ENST00000290650 TRGV1A0A0A0MS02 117 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms