RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 MYO9AB2RTY4 2548 aa8.1□□□□□ -1.11
SKA1-201ENST00000285116 IGLV11-55A0A075B6I3 123 aa8.1□□□□□ -1.11
SKA1-201ENST00000285116 IGHV3-21A0A0B4J1V1 117 aa8.1□□□□□ -1.11
SKA1-201ENST00000285116 A0A1W2PRD5 423 aa8.1□□□□□ -1.11
SKA1-201ENST00000285116 A0A1W2PRF3 423 aa8.1□□□□□ -1.11
SKA1-201ENST00000285116 A0A1W2PRM7 423 aa8.1□□□□□ -1.11
SKA1-201ENST00000285116 GFRALQ6UXV0 394 aa8.1□□□□□ -1.11
SKA1-201ENST00000285116 TMEM213A2RRL7 107 aa8.1□□□□□ -1.11
SKA1-201ENST00000285116 FAM90A27PA6NNH2 459 aa8.1□□□□□ -1.11
SKA1-201ENST00000285116 K7ERJ3 54 aa8.1□□□□□ -1.11
SKA1-201ENST00000285116 PF4P02776 101 aa8.1□□□□□ -1.11
SKA1-201ENST00000285116 SRSF1Q07955 248 aaKnown RBP eCLIP8.1□□□□□ -1.11
SKA1-201ENST00000285116 C18orf15Q96N68 181 aa8.1□□□□□ -1.11
SKA1-201ENST00000285116 PSMG3-AS1Q96PY0 264 aa8.1□□□□□ -1.11
SKA1-201ENST00000285116 AAMDCQ9H7C9 122 aa8.1□□□□□ -1.11
SKA1-201ENST00000285116 ZMAT4Q9H898 229 aa8.1□□□□□ -1.11
SKA1-201ENST00000285116 TEP1Q99973 2627 aaKnown RBP8.1□□□□□ -1.11
SKA1-201ENST00000285116 FBN2P35556 2912 aa8.1□□□□□ -1.11
SKA1-201ENST00000285116 ODF3BA8MYP8 253 aa8.09□□□□□ -1.11
SKA1-201ENST00000285116 M0R1W7 72 aa8.09□□□□□ -1.11
SKA1-201ENST00000285116 CD3EP07766 207 aa8.09□□□□□ -1.11
SKA1-201ENST00000285116 CKS2P33552 79 aa8.09□□□□□ -1.11
SKA1-201ENST00000285116 WFDC2Q14508 124 aa8.09□□□□□ -1.11
SKA1-201ENST00000285116 FBXL19-AS1Q494R0 122 aa8.09□□□□□ -1.11
SKA1-201ENST00000285116 CCDC144NLQ6NUI1 221 aa8.09□□□□□ -1.11
SKA1-201ENST00000285116 CEND1Q8N111 149 aa8.09□□□□□ -1.11
SKA1-201ENST00000285116 TTC9CQ8N5M4 171 aa8.09□□□□□ -1.11
SKA1-201ENST00000285116 C17orf77Q96MU5 243 aa8.09□□□□□ -1.11
SKA1-201ENST00000285116 CNFNQ9BYD5 112 aa8.09□□□□□ -1.11
SKA1-201ENST00000285116 NHP2Q9NX24 153 aaKnown RBP8.09□□□□□ -1.11
SKA1-201ENST00000285116 IGKV2D-26A0A0A0MRZ7 120 aa8.09□□□□□ -1.11
SKA1-201ENST00000285116 K7ENP7 123 aa8.09□□□□□ -1.11
SKA1-201ENST00000285116 TIMM23O14925 209 aa8.09□□□□□ -1.11
SKA1-201ENST00000285116 HLA-DRB4P13762 266 aa8.09□□□□□ -1.11
SKA1-201ENST00000285116 LINC01559Q495D7 138 aa8.09□□□□□ -1.11
SKA1-201ENST00000285116 TCTEX1D4Q5JR98 221 aa8.09□□□□□ -1.11
SKA1-201ENST00000285116 HHLA3Q9XRX5 114 aa8.09□□□□□ -1.11
SKA1-201ENST00000285116 HLA-DRB4X5D2U9 266 aa8.09□□□□□ -1.11
SKA1-201ENST00000285116 CREBBPQ92793 2442 aa8.09□□□□□ -1.11
SKA1-201ENST00000285116 TRBV25-1A0A075B6N4 114 aa8.09□□□□□ -1.12
SKA1-201ENST00000285116 IGLL5B9A064 214 aa8.09□□□□□ -1.12
SKA1-201ENST00000285116 NPYP01303 97 aa8.09□□□□□ -1.12
SKA1-201ENST00000285116 IL4P05112 153 aa8.09□□□□□ -1.12
SKA1-201ENST00000285116 RAB9AP51151 201 aa8.09□□□□□ -1.12
SKA1-201ENST00000285116 MFAP4P55083 255 aa8.09□□□□□ -1.12
SKA1-201ENST00000285116 ODF1Q14990 250 aa8.09□□□□□ -1.12
SKA1-201ENST00000285116 DPM3Q9P2X0 92 aa8.09□□□□□ -1.12
SKA1-201ENST00000285116 PLXNB1O43157 2135 aa8.08□□□□□ -1.12
SKA1-201ENST00000285116 OOSP1A8MZH6 123 aa8.08□□□□□ -1.12
SKA1-201ENST00000285116 F8W735 103 aaPredicted RBP8.08□□□□□ -1.12
SKA1-201ENST00000285116 IGLC6P0CF74 106 aa8.08□□□□□ -1.12
SKA1-201ENST00000285116 APELAP0DMC3 54 aa8.08□□□□□ -1.12
SKA1-201ENST00000285116 EVI2AP22794 236 aa8.08□□□□□ -1.12
SKA1-201ENST00000285116 CKS1BP61024 79 aa8.08□□□□□ -1.12
SKA1-201ENST00000285116 SCGB2A2Q13296 93 aa8.08□□□□□ -1.12
SKA1-201ENST00000285116 ZNF562Q6V9R5 426 aa8.08□□□□□ -1.12
SKA1-201ENST00000285116 FANCD2OSQ96PS1 177 aa8.08□□□□□ -1.12
SKA1-201ENST00000285116 ASCL2Q99929 193 aa8.08□□□□□ -1.12
SKA1-201ENST00000285116 SPAG8Q99932 426 aaPredicted RBP8.08□□□□□ -1.12
SKA1-201ENST00000285116 SH2D1AO60880 128 aa8.08□□□□□ -1.12
SKA1-201ENST00000285116 CNIH1O95406 144 aa8.08□□□□□ -1.12
SKA1-201ENST00000285116 IGKCP01834 107 aa8.08□□□□□ -1.12
SKA1-201ENST00000285116 ZNF502Q8TBZ5 544 aa8.08□□□□□ -1.12
SKA1-201ENST00000285116 ZNF479Q96JC4 524 aa8.08□□□□□ -1.12
SKA1-201ENST00000285116 VKORC1Q9BQB6 163 aa8.08□□□□□ -1.12
SKA1-201ENST00000285116 RPL7P18124 248 aaKnown RBP8.07□□□□□ -1.12
SKA1-201ENST00000285116 EBI3Q14213 229 aa8.07□□□□□ -1.12
SKA1-201ENST00000285116 TAL2Q16559 108 aa8.07□□□□□ -1.12
SKA1-201ENST00000285116 C5orf64Q2M2E5 130 aa8.07□□□□□ -1.12
SKA1-201ENST00000285116 WFDC3Q8IUB2 231 aa8.07□□□□□ -1.12
SKA1-201ENST00000285116 Q8N6K4 173 aa8.07□□□□□ -1.12
SKA1-201ENST00000285116 BBC3Q96PG8 261 aaPredicted RBP8.07□□□□□ -1.12
SKA1-201ENST00000285116 MAP1LC3AQ9H492 121 aa8.07□□□□□ -1.12
SKA1-201ENST00000285116 DOPEY1Q5JWR5 2465 aa8.07□□□□□ -1.12
SKA1-201ENST00000285116 ZNF469Q96JG9 3925 aaPredicted RBP8.07□□□□□ -1.12
SKA1-201ENST00000285116 SCGB2A1O75556 95 aa8.07□□□□□ -1.12
SKA1-201ENST00000285116 C8orf49Q96NF6 230 aa8.07□□□□□ -1.12
SKA1-201ENST00000285116 JMJD1CQ15652 2540 aa8.07□□□□□ -1.12
SKA1-201ENST00000285116 TMSB15BA0A087X1C1 80 aa8.06□□□□□ -1.12
SKA1-201ENST00000285116 SMKR1H3BMG3 65 aa8.06□□□□□ -1.12
SKA1-201ENST00000285116 COX7A1P24310 79 aa8.06□□□□□ -1.12
SKA1-201ENST00000285116 FCER1GP30273 86 aa8.06□□□□□ -1.12
SKA1-201ENST00000285116 ETDBQ3ZM63 59 aa8.06□□□□□ -1.12
SKA1-201ENST00000285116 KLF17Q5JT82 389 aaPredicted RBP8.06□□□□□ -1.12
SKA1-201ENST00000285116 HIST2H2BCQ6DN03 193 aa8.06□□□□□ -1.12
SKA1-201ENST00000285116 PRR25Q96S07 402 aa8.06□□□□□ -1.12
SKA1-201ENST00000285116 TTTY13Q9BZ97 58 aa8.06□□□□□ -1.12
SKA1-201ENST00000285116 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.06□□□□□ -1.12
SKA1-201ENST00000285116 ATP5LO75964 103 aa8.06□□□□□ -1.12
SKA1-201ENST00000285116 PRSS1P07477 247 aa8.06□□□□□ -1.12
SKA1-201ENST00000285116 GAGE13Q4V321 117 aa8.06□□□□□ -1.12
SKA1-201ENST00000285116 Q5PR19 223 aa8.06□□□□□ -1.12
SKA1-201ENST00000285116 MRAP2Q96G30 205 aa8.06□□□□□ -1.12
SKA1-201ENST00000285116 RBAKDNA6NC62 111 aa8.06□□□□□ -1.12
SKA1-201ENST00000285116 H3BMG7 143 aa8.06□□□□□ -1.12
SKA1-201ENST00000285116 DPM2O94777 84 aa8.06□□□□□ -1.12
SKA1-201ENST00000285116 LEPP41159 167 aa8.06□□□□□ -1.12
SKA1-201ENST00000285116 TWIST1Q15672 202 aa8.06□□□□□ -1.12
SKA1-201ENST00000285116 SH2D6Q7Z4S9 175 aa8.06□□□□□ -1.12
SKA1-201ENST00000285116 LINC01560Q8TB33 94 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms