RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 PRR27Q6MZM9 219 aa14.01□□□□□ -0.17
PDLIM3-202ENST00000284770 GTSCR1Q86UQ5 136 aa14.01□□□□□ -0.17
PDLIM3-202ENST00000284770 C15orf54Q8N8G6 183 aa14.01□□□□□ -0.17
PDLIM3-202ENST00000284770 BIN3Q9NQY0 253 aa14.01□□□□□ -0.17
PDLIM3-202ENST00000284770 LENEPQ9Y5L5 61 aa14.01□□□□□ -0.17
PDLIM3-202ENST00000284770 HLA-DRB4X5D2U9 266 aa14.01□□□□□ -0.17
PDLIM3-202ENST00000284770 H3BMM0 161 aa14□□□□□ -0.17
PDLIM3-202ENST00000284770 PFN1P07737 140 aaKnown RBP14□□□□□ -0.17
PDLIM3-202ENST00000284770 ELOBQ15370 118 aa14□□□□□ -0.17
PDLIM3-202ENST00000284770 NUDT10Q8NFP7 164 aa14□□□□□ -0.17
PDLIM3-202ENST00000284770 NUDT11Q96G61 164 aa14□□□□□ -0.17
PDLIM3-202ENST00000284770 NDFIP1Q9BT67 221 aa14□□□□□ -0.17
PDLIM3-202ENST00000284770 URGCP-MRPS24S4R325 110 aa14□□□□□ -0.17
PDLIM3-202ENST00000284770 OR4B1Q8NGF8 309 aa13.99□□□□□ -0.17
PDLIM3-202ENST00000284770 CRIP1P50238 77 aa13.99□□□□□ -0.17
PDLIM3-202ENST00000284770 FAM19A4Q96LR4 140 aa13.99□□□□□ -0.17
PDLIM3-202ENST00000284770 TRBV7-9A0A0J9YWB2 115 aa13.98□□□□□ -0.17
PDLIM3-202ENST00000284770 EGFEM1PQ0D2K5 195 aa13.98□□□□□ -0.17
PDLIM3-202ENST00000284770 IMMP2LQ96T52 175 aa13.98□□□□□ -0.17
PDLIM3-202ENST00000284770 AGRNO00468 2067 aa13.97□□□□□ -0.17
PDLIM3-202ENST00000284770 A8MTW9 85 aa13.97□□□□□ -0.17
PDLIM3-202ENST00000284770 IGKV3-20P01619 116 aa13.97□□□□□ -0.17
PDLIM3-202ENST00000284770 ODF3Q96PU9 254 aa13.97□□□□□ -0.17
PDLIM3-202ENST00000284770 WFDC10AQ9H1F0 79 aa13.96□□□□□ -0.17
PDLIM3-202ENST00000284770 IL36BQ9NZH7 164 aa13.96□□□□□ -0.17
PDLIM3-202ENST00000284770 ZMAT5Q9UDW3 170 aaKnown RBP13.96□□□□□ -0.17
PDLIM3-202ENST00000284770 ZNF705GA8MUZ8 300 aaPredicted RBP13.96□□□□□ -0.18
PDLIM3-202ENST00000284770 GATCO43716 136 aaKnown RBP13.96□□□□□ -0.18
PDLIM3-202ENST00000284770 CRISP2P16562 243 aa13.96□□□□□ -0.18
PDLIM3-202ENST00000284770 AMTNQ6UX39 209 aa13.96□□□□□ -0.18
PDLIM3-202ENST00000284770 STHQ8IWL8 128 aa13.96□□□□□ -0.18
PDLIM3-202ENST00000284770 CLUHP3Q96NS8 147 aa13.96□□□□□ -0.18
PDLIM3-202ENST00000284770 PKD1L1Q8TDX9 2849 aa13.95□□□□□ -0.18
PDLIM3-202ENST00000284770 TGIF2-C20orf24A0A0A6YYL0 155 aa13.95□□□□□ -0.18
PDLIM3-202ENST00000284770 G3V4G9 280 aa13.95□□□□□ -0.18
PDLIM3-202ENST00000284770 CXCL1P09341 107 aa13.95□□□□□ -0.18
PDLIM3-202ENST00000284770 ZNF80P51504 273 aaPredicted RBP13.95□□□□□ -0.18
PDLIM3-202ENST00000284770 SMUG1Q53HV7 270 aa13.95□□□□□ -0.18
PDLIM3-202ENST00000284770 SAMD5Q5TGI4 173 aa13.95□□□□□ -0.18
PDLIM3-202ENST00000284770 ZFAND2AQ8N6M9 145 aa13.95□□□□□ -0.18
PDLIM3-202ENST00000284770 TRBV24-1A0A075B6N3 115 aa13.94□□□□□ -0.18
PDLIM3-202ENST00000284770 P01737 135 aa13.94□□□□□ -0.18
PDLIM3-202ENST00000284770 S100PP25815 95 aa13.94□□□□□ -0.18
PDLIM3-202ENST00000284770 KRTAP10-11P60412 298 aa13.94□□□□□ -0.18
PDLIM3-202ENST00000284770 TRPT1Q86TN4 253 aaKnown RBP13.94□□□□□ -0.18
PDLIM3-202ENST00000284770 Q8N1Y9 231 aa13.94□□□□□ -0.18
PDLIM3-202ENST00000284770 DEFB125Q8N687 156 aa13.94□□□□□ -0.18
PDLIM3-202ENST00000284770 DAZAP1Q96EP5 407 aaKnown RBP13.94□□□□□ -0.18
PDLIM3-202ENST00000284770 PYGO2Q9BRQ0 406 aa13.94□□□□□ -0.18
PDLIM3-202ENST00000284770 CA1P00915 261 aaPredicted RBP13.94□□□□□ -0.18
PDLIM3-202ENST00000284770 LEPP41159 167 aa13.94□□□□□ -0.18
PDLIM3-202ENST00000284770 FAM3BP58499 235 aaPredicted RBP13.94□□□□□ -0.18
PDLIM3-202ENST00000284770 KCNIP4Q6PIL6 250 aa13.94□□□□□ -0.18
PDLIM3-202ENST00000284770 RPP21Q9H633 154 aaKnown RBP13.94□□□□□ -0.18
PDLIM3-202ENST00000284770 SMIM27A0A1W2PRY6 76 aa13.93□□□□□ -0.18
PDLIM3-202ENST00000284770 RBMY1BA6NDE4 496 aaKnown RBP13.93□□□□□ -0.18
PDLIM3-202ENST00000284770 RBMY1EA6NEQ0 496 aaKnown RBP13.93□□□□□ -0.18
PDLIM3-202ENST00000284770 GPX1P07203 203 aa13.93□□□□□ -0.18
PDLIM3-202ENST00000284770 RBMY1DP0C7P1 496 aaKnown RBP13.93□□□□□ -0.18
PDLIM3-202ENST00000284770 TSPOP30536 169 aa13.93□□□□□ -0.18
PDLIM3-202ENST00000284770 CT83Q5H943 113 aa13.93□□□□□ -0.18
PDLIM3-202ENST00000284770 FAM162BQ5T6X4 162 aa13.93□□□□□ -0.18
PDLIM3-202ENST00000284770 KLLNB2CW77 178 aa13.92□□□□□ -0.18
PDLIM3-202ENST00000284770 SH2D1AO60880 128 aa13.92□□□□□ -0.18
PDLIM3-202ENST00000284770 CDKN1BP46527 198 aa13.92□□□□□ -0.18
PDLIM3-202ENST00000284770 CMYA5Q8N3K9 4069 aa13.92□□□□□ -0.18
PDLIM3-202ENST00000284770 A0A1W2PPQ1 181 aa13.91□□□□□ -0.18
PDLIM3-202ENST00000284770 J3KRW8 73 aa13.91□□□□□ -0.18
PDLIM3-202ENST00000284770 SPINK13Q1W4C9 94 aa13.91□□□□□ -0.18
PDLIM3-202ENST00000284770 PRR9Q5T870 116 aa13.91□□□□□ -0.18
PDLIM3-202ENST00000284770 M0R2Z0 102 aa13.91□□□□□ -0.18
PDLIM3-202ENST00000284770 RAB5AP20339 215 aa13.91□□□□□ -0.18
PDLIM3-202ENST00000284770 KIR3DS1Q14943 382 aa13.91□□□□□ -0.18
PDLIM3-202ENST00000284770 TSKUQ8WUA8 353 aa13.91□□□□□ -0.18
PDLIM3-202ENST00000284770 RNASE4P34096 147 aaKnown RBP13.9□□□□□ -0.18
PDLIM3-202ENST00000284770 FAM210BQ96KR6 192 aa13.9□□□□□ -0.18
PDLIM3-202ENST00000284770 TRAV9-1A0A075B6T8 112 aa13.89□□□□□ -0.19
PDLIM3-202ENST00000284770 FABP5P3A8MUU1 101 aa13.89□□□□□ -0.19
PDLIM3-202ENST00000284770 NUTF2P61970 127 aaKnown RBP13.89□□□□□ -0.19
PDLIM3-202ENST00000284770 OR2D3Q8NGH3 330 aa13.89□□□□□ -0.19
PDLIM3-202ENST00000284770 A8MWL6 223 aa13.88□□□□□ -0.19
PDLIM3-202ENST00000284770 TCL1AP56279 114 aa13.88□□□□□ -0.19
PDLIM3-202ENST00000284770 FXYD7P58549 80 aa13.88□□□□□ -0.19
PDLIM3-202ENST00000284770 RPL19P84098 196 aaKnown RBP13.88□□□□□ -0.19
PDLIM3-202ENST00000284770 SRD5A3Q9H8P0 318 aa13.88□□□□□ -0.19
PDLIM3-202ENST00000284770 TRAV12-2A0A075B6T6 113 aa13.88□□□□□ -0.19
PDLIM3-202ENST00000284770 GFI1BQ5VTD9 330 aa13.88□□□□□ -0.19
PDLIM3-202ENST00000284770 Q6AWC8 147 aa13.88□□□□□ -0.19
PDLIM3-202ENST00000284770 NEU1Q99519 415 aa13.88□□□□□ -0.19
PDLIM3-202ENST00000284770 TRAV21A0A0B4J279 112 aa13.87□□□□□ -0.19
PDLIM3-202ENST00000284770 CRXO43186 299 aaPredicted RBP13.87□□□□□ -0.19
PDLIM3-202ENST00000284770 TYMSP04818 313 aa13.87□□□□□ -0.19
PDLIM3-202ENST00000284770 RPL35AP18077 110 aaKnown RBP13.87□□□□□ -0.19
PDLIM3-202ENST00000284770 ZNF575Q86XF7 245 aa13.87□□□□□ -0.19
PDLIM3-202ENST00000284770 GTSF1Q8WW33 167 aa13.87□□□□□ -0.19
PDLIM3-202ENST00000284770 GFRA4Q9GZZ7 299 aa13.87□□□□□ -0.19
PDLIM3-202ENST00000284770 C7orf71A4D174 169 aa13.86□□□□□ -0.19
PDLIM3-202ENST00000284770 FAM231BA6NCW3 169 aa13.86□□□□□ -0.19
PDLIM3-202ENST00000284770 Q6ZQT7 251 aa13.86□□□□□ -0.19
PDLIM3-202ENST00000284770 BTF3L4Q96K17 158 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms