RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 NPFFR1Q9GZQ6 430 aa14.19□□□□□ -0.14
PDLIM3-201ENST00000284767 NPIPB5A8MRT5 1133 aa14.19□□□□□ -0.14
PDLIM3-201ENST00000284767 PRB4P10163 310 aaPredicted RBP14.19□□□□□ -0.14
PDLIM3-201ENST00000284767 MRPL51Q4U2R6 128 aaKnown RBP14.19□□□□□ -0.14
PDLIM3-201ENST00000284767 IGHV1-69DA0A0B4J2H0 117 aa14.18□□□□□ -0.14
PDLIM3-201ENST00000284767 SH2D1AO60880 128 aa14.18□□□□□ -0.14
PDLIM3-201ENST00000284767 IGHV1-69P01742 117 aa14.18□□□□□ -0.14
PDLIM3-201ENST00000284767 COX6B1P14854 86 aa14.18□□□□□ -0.14
PDLIM3-201ENST00000284767 TTC9CQ8N5M4 171 aa14.18□□□□□ -0.14
PDLIM3-201ENST00000284767 F8W735 103 aaPredicted RBP14.18□□□□□ -0.14
PDLIM3-201ENST00000284767 ATP6V0E1O15342 81 aa14.18□□□□□ -0.14
PDLIM3-201ENST00000284767 G3V318 75 aa14.17□□□□□ -0.14
PDLIM3-201ENST00000284767 IFI27L1Q96BM0 104 aa14.17□□□□□ -0.14
PDLIM3-201ENST00000284767 CSTL1Q9H114 145 aa14.17□□□□□ -0.14
PDLIM3-201ENST00000284767 FBLL1A6NHQ2 334 aaKnown RBP14.17□□□□□ -0.14
PDLIM3-201ENST00000284767 K7EP34 96 aa14.17□□□□□ -0.14
PDLIM3-201ENST00000284767 AVPP01185 164 aa14.17□□□□□ -0.14
PDLIM3-201ENST00000284767 ADAMTSL5Q6ZMM2 481 aa14.17□□□□□ -0.14
PDLIM3-201ENST00000284767 THYN1Q9P016 225 aa14.17□□□□□ -0.14
PDLIM3-201ENST00000284767 TMSB15BA0A087X1C1 80 aa14.16□□□□□ -0.14
PDLIM3-201ENST00000284767 KIR3DS1Q14943 382 aa14.16□□□□□ -0.14
PDLIM3-201ENST00000284767 PIFOQ8TCI5 191 aa14.16□□□□□ -0.14
PDLIM3-201ENST00000284767 GNG7O60262 68 aa14.16□□□□□ -0.14
PDLIM3-201ENST00000284767 MSMBP08118 114 aa14.16□□□□□ -0.14
PDLIM3-201ENST00000284767 FER1L6-AS1Q8NA97 138 aa14.16□□□□□ -0.14
PDLIM3-201ENST00000284767 JMJD8Q96S16 334 aa14.16□□□□□ -0.14
PDLIM3-201ENST00000284767 LINC00527Q9UJ94 153 aa14.16□□□□□ -0.14
PDLIM3-201ENST00000284767 TENM4Q6N022 2769 aa14.15□□□□□ -0.14
PDLIM3-201ENST00000284767 NAV2Q8IVL1 2488 aa14.15□□□□□ -0.14
PDLIM3-201ENST00000284767 IGHV3-35A0A0C4DH35 117 aa14.15□□□□□ -0.14
PDLIM3-201ENST00000284767 CKS2P33552 79 aa14.15□□□□□ -0.14
PDLIM3-201ENST00000284767 PSMG4Q5JS54 123 aa14.15□□□□□ -0.14
PDLIM3-201ENST00000284767 ZNF48Q96MX3 618 aaPredicted RBP14.15□□□□□ -0.14
PDLIM3-201ENST00000284767 HIF1ANQ9NWT6 349 aa14.15□□□□□ -0.14
PDLIM3-201ENST00000284767 A0A0G2JLM5 398 aa14.15□□□□□ -0.14
PDLIM3-201ENST00000284767 H3BUT2 72 aa14.15□□□□□ -0.14
PDLIM3-201ENST00000284767 MEGF9Q9H1U4 602 aa14.15□□□□□ -0.14
PDLIM3-201ENST00000284767 IGHV3OR16-8A0A075B7F1 116 aa14.14□□□□□ -0.15
PDLIM3-201ENST00000284767 LY6EQ16553 131 aa14.14□□□□□ -0.15
PDLIM3-201ENST00000284767 C21orf62Q9NYP8 219 aa14.14□□□□□ -0.15
PDLIM3-201ENST00000284767 NPYP01303 97 aa14.13□□□□□ -0.15
PDLIM3-201ENST00000284767 C5orf56Q8N8D9 126 aa14.13□□□□□ -0.15
PDLIM3-201ENST00000284767 OR2K2Q8NGT1 345 aa14.13□□□□□ -0.15
PDLIM3-201ENST00000284767 PRR25Q96S07 402 aa14.13□□□□□ -0.15
PDLIM3-201ENST00000284767 BMI1P35226 326 aa14.13□□□□□ -0.15
PDLIM3-201ENST00000284767 MFAP4P55083 255 aa14.13□□□□□ -0.15
PDLIM3-201ENST00000284767 TWIST1Q15672 202 aa14.13□□□□□ -0.15
PDLIM3-201ENST00000284767 SRSF2Q01130 221 aaKnown RBP14.12□□□□□ -0.15
PDLIM3-201ENST00000284767 LINC01546A6NGU7 62 aa14.12□□□□□ -0.15
PDLIM3-201ENST00000284767 IGLC6P0CF74 106 aa14.12□□□□□ -0.15
PDLIM3-201ENST00000284767 FXYD7P58549 80 aa14.12□□□□□ -0.15
PDLIM3-201ENST00000284767 OR5A1Q8NGJ0 315 aa14.12□□□□□ -0.15
PDLIM3-201ENST00000284767 SAP30O75446 220 aa14.11□□□□□ -0.15
PDLIM3-201ENST00000284767 RPL7P18124 248 aaKnown RBP14.11□□□□□ -0.15
PDLIM3-201ENST00000284767 NMUP48645 174 aa14.11□□□□□ -0.15
PDLIM3-201ENST00000284767 IGKV2-40A0A087WW87 121 aaPredicted RBP14.11□□□□□ -0.15
PDLIM3-201ENST00000284767 IGKV2D-40P01614 121 aaPredicted RBP14.11□□□□□ -0.15
PDLIM3-201ENST00000284767 PCP2Q8IVA1 136 aa14.11□□□□□ -0.15
PDLIM3-201ENST00000284767 APCP25054 2843 aa14.11□□□□□ -0.15
PDLIM3-201ENST00000284767 ZNF469Q96JG9 3925 aaPredicted RBP14.1□□□□□ -0.15
PDLIM3-201ENST00000284767 A0A1W2PPM0 123 aa14.1□□□□□ -0.15
PDLIM3-201ENST00000284767 C15orf32Q32M92 178 aa14.1□□□□□ -0.15
PDLIM3-201ENST00000284767 MAP1LC3AQ9H492 121 aa14.1□□□□□ -0.15
PDLIM3-201ENST00000284767 DOPEY2Q9Y3R5 2298 aa14.1□□□□□ -0.15
PDLIM3-201ENST00000284767 B4DSR2 109 aa14.1□□□□□ -0.15
PDLIM3-201ENST00000284767 G3V4G9 280 aa14.1□□□□□ -0.15
PDLIM3-201ENST00000284767 SMKR1H3BMG3 65 aa14.1□□□□□ -0.15
PDLIM3-201ENST00000284767 CTSGP08311 255 aa14.09□□□□□ -0.15
PDLIM3-201ENST00000284767 FAM110DQ8TAY7 271 aaPredicted RBP14.09□□□□□ -0.15
PDLIM3-201ENST00000284767 CNFNQ9BYD5 112 aa14.09□□□□□ -0.15
PDLIM3-201ENST00000284767 DKK2Q9UBU2 259 aa14.09□□□□□ -0.15
PDLIM3-201ENST00000284767 H3BUX3 64 aa14.09□□□□□ -0.15
PDLIM3-201ENST00000284767 TCTAP57738 103 aa14.09□□□□□ -0.15
PDLIM3-201ENST00000284767 LINC01559Q495D7 138 aa14.09□□□□□ -0.15
PDLIM3-201ENST00000284767 NEGR1Q7Z3B1 354 aa14.09□□□□□ -0.15
PDLIM3-201ENST00000284767 HIGD1BQ9P298 99 aa14.09□□□□□ -0.15
PDLIM3-201ENST00000284767 A0A096LNT2 108 aa14.08□□□□□ -0.16
PDLIM3-201ENST00000284767 ZMAT4Q9H898 229 aa14.08□□□□□ -0.16
PDLIM3-201ENST00000284767 MOB4Q9Y3A3 225 aa14.08□□□□□ -0.16
PDLIM3-201ENST00000284767 SPCS1Q9Y6A9 102 aa14.08□□□□□ -0.16
PDLIM3-201ENST00000284767 ZNF80P51504 273 aaPredicted RBP14.07□□□□□ -0.16
PDLIM3-201ENST00000284767 RAB37Q96AX2 223 aa14.07□□□□□ -0.16
PDLIM3-201ENST00000284767 RNF185Q96GF1 192 aa14.07□□□□□ -0.16
PDLIM3-201ENST00000284767 NXT2Q9NPJ8 142 aaKnown RBP14.07□□□□□ -0.16
PDLIM3-201ENST00000284767 FCER1GP30273 86 aa14.07□□□□□ -0.16
PDLIM3-201ENST00000284767 NAA38Q9BRA0 125 aaKnown RBP14.07□□□□□ -0.16
PDLIM3-201ENST00000284767 RNF223E7ERA6 249 aa14.06□□□□□ -0.16
PDLIM3-201ENST00000284767 FABP2P12104 132 aa14.06□□□□□ -0.16
PDLIM3-201ENST00000284767 HIST2H2BCQ6DN03 193 aa14.06□□□□□ -0.16
PDLIM3-201ENST00000284767 Q6ZS46 218 aa14.06□□□□□ -0.16
PDLIM3-201ENST00000284767 SCGB2A1O75556 95 aa14.06□□□□□ -0.16
PDLIM3-201ENST00000284767 CLEC3BP05452 202 aa14.06□□□□□ -0.16
PDLIM3-201ENST00000284767 SMIM13P0DJ93 91 aa14.06□□□□□ -0.16
PDLIM3-201ENST00000284767 PRSS57Q6UWY2 283 aa14.06□□□□□ -0.16
PDLIM3-201ENST00000284767 Q8TAT8 98 aa14.06□□□□□ -0.16
PDLIM3-201ENST00000284767 VGLL1Q99990 258 aa14.06□□□□□ -0.16
PDLIM3-201ENST00000284767 DSCR9P59020 149 aa14.05□□□□□ -0.16
PDLIM3-201ENST00000284767 ODF1Q14990 250 aa14.05□□□□□ -0.16
PDLIM3-201ENST00000284767 ZNF575Q86XF7 245 aa14.05□□□□□ -0.16
PDLIM3-201ENST00000284767 TEX15Q9BXT5 2789 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms