RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 CUBNO60494 3623 aa10.02□□□□□ -0.8
COL8A1-202ENST00000273342 GAGE12HA6NDE8 117 aa10.02□□□□□ -0.8
COL8A1-202ENST00000273342 IGLL5B9A064 214 aa10.02□□□□□ -0.8
COL8A1-202ENST00000273342 LINC01560Q8TB33 94 aa10.02□□□□□ -0.8
COL8A1-202ENST00000273342 CIDEAO60543 219 aa10.02□□□□□ -0.81
COL8A1-202ENST00000273342 IGHG4P01861 327 aa10.02□□□□□ -0.81
COL8A1-202ENST00000273342 IGLC6P0CF74 106 aa10.02□□□□□ -0.81
COL8A1-202ENST00000273342 BMI1P35226 326 aa10.02□□□□□ -0.81
COL8A1-202ENST00000273342 C3orf36Q3SXR2 165 aa10.02□□□□□ -0.81
COL8A1-202ENST00000273342 FAM57AQ8TBR7 257 aa10.02□□□□□ -0.81
COL8A1-202ENST00000273342 PHLDA1Q8WV24 401 aaPredicted RBP10.02□□□□□ -0.81
COL8A1-202ENST00000273342 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.02□□□□□ -0.81
COL8A1-202ENST00000273342 FABP5P3A8MUU1 101 aa10.01□□□□□ -0.81
COL8A1-202ENST00000273342 F8W735 103 aaPredicted RBP10.01□□□□□ -0.81
COL8A1-202ENST00000273342 CEACAM4O75871 244 aa10.01□□□□□ -0.81
COL8A1-202ENST00000273342 RPL7P18124 248 aaKnown RBP10.01□□□□□ -0.81
COL8A1-202ENST00000273342 SPAG8Q99932 426 aaPredicted RBP10.01□□□□□ -0.81
COL8A1-202ENST00000273342 CYSLTR1Q9Y271 337 aa10.01□□□□□ -0.81
COL8A1-202ENST00000273342 VSTM5A8MXK1 200 aa10.01□□□□□ -0.81
COL8A1-202ENST00000273342 C11orf21Q9P2W6 132 aa10.01□□□□□ -0.81
COL8A1-202ENST00000273342 KAAG1Q9UBP8 84 aa10.01□□□□□ -0.81
COL8A1-202ENST00000273342 FAM90A27PA6NNH2 459 aa10□□□□□ -0.81
COL8A1-202ENST00000273342 C12orf74Q32Q52 190 aa10□□□□□ -0.81
COL8A1-202ENST00000273342 MYOZ3Q8TDC0 251 aa10□□□□□ -0.81
COL8A1-202ENST00000273342 SPANXB1Q9NS25 103 aaPredicted RBP10□□□□□ -0.81
COL8A1-202ENST00000273342 SHISA9B4DS77 424 aa10□□□□□ -0.81
COL8A1-202ENST00000273342 Q6ZS92 163 aa10□□□□□ -0.81
COL8A1-202ENST00000273342 PIP4P1Q86T03 277 aa10□□□□□ -0.81
COL8A1-202ENST00000273342 ZFHX3Q15911 3703 aa10□□□□□ -0.81
COL8A1-202ENST00000273342 PDE6HQ13956 83 aa9.99□□□□□ -0.81
COL8A1-202ENST00000273342 FOXI2Q6ZQN5 318 aa9.99□□□□□ -0.81
COL8A1-202ENST00000273342 CLUHP3Q96NS8 147 aa9.99□□□□□ -0.81
COL8A1-202ENST00000273342 NXT2Q9NPJ8 142 aaKnown RBP9.99□□□□□ -0.81
COL8A1-202ENST00000273342 TGFAP01135 160 aa9.99□□□□□ -0.81
COL8A1-202ENST00000273342 SVIPQ8NHG7 77 aa9.99□□□□□ -0.81
COL8A1-202ENST00000273342 IGKV3D-20A0A0C4DH25 116 aa9.99□□□□□ -0.81
COL8A1-202ENST00000273342 A0A1B0GWB2 263 aa9.99□□□□□ -0.81
COL8A1-202ENST00000273342 CTSGP08311 255 aa9.99□□□□□ -0.81
COL8A1-202ENST00000273342 GRNP28799 593 aaKnown RBP9.99□□□□□ -0.81
COL8A1-202ENST00000273342 CD300EQ496F6 205 aaPredicted RBP9.99□□□□□ -0.81
COL8A1-202ENST00000273342 RAB1BQ9H0U4 201 aa9.99□□□□□ -0.81
COL8A1-202ENST00000273342 ECSCRQ19T08 205 aa9.98□□□□□ -0.81
COL8A1-202ENST00000273342 TTC9CQ8N5M4 171 aa9.98□□□□□ -0.81
COL8A1-202ENST00000273342 TNFRSF14Q92956 283 aa9.98□□□□□ -0.81
COL8A1-202ENST00000273342 DPM3Q9P2X0 92 aa9.98□□□□□ -0.81
COL8A1-202ENST00000273342 IGLV11-55A0A075B6I3 123 aa9.98□□□□□ -0.81
COL8A1-202ENST00000273342 E9PLD3 99 aa9.98□□□□□ -0.81
COL8A1-202ENST00000273342 FOXC1Q12948 553 aa9.98□□□□□ -0.81
COL8A1-202ENST00000273342 SCGB2A2Q13296 93 aa9.98□□□□□ -0.81
COL8A1-202ENST00000273342 C5orf64Q2M2E5 130 aa9.98□□□□□ -0.81
COL8A1-202ENST00000273342 GAGE13Q4V321 117 aa9.98□□□□□ -0.81
COL8A1-202ENST00000273342 SPANXN1Q5VSR9 72 aa9.98□□□□□ -0.81
COL8A1-202ENST00000273342 CCDC144NLQ6NUI1 221 aa9.98□□□□□ -0.81
COL8A1-202ENST00000273342 ZMAT4Q9H898 229 aa9.98□□□□□ -0.81
COL8A1-202ENST00000273342 EMP1P54849 157 aa9.97□□□□□ -0.81
COL8A1-202ENST00000273342 C20orf78Q9BR46 151 aa9.97□□□□□ -0.81
COL8A1-202ENST00000273342 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.97□□□□□ -0.81
COL8A1-202ENST00000273342 DEFB1P60022 68 aa9.97□□□□□ -0.81
COL8A1-202ENST00000273342 TM2D2Q9BX73 214 aa9.97□□□□□ -0.81
COL8A1-202ENST00000273342 HIF1ANQ9NWT6 349 aa9.97□□□□□ -0.81
COL8A1-202ENST00000273342 HIGD1BQ9P298 99 aa9.97□□□□□ -0.81
COL8A1-202ENST00000273342 H3BVH4 76 aa9.96□□□□□ -0.81
COL8A1-202ENST00000273342 Q8N8P6 123 aa9.96□□□□□ -0.81
COL8A1-202ENST00000273342 LOC107984156A0A0G2JMH3 177 aa9.96□□□□□ -0.82
COL8A1-202ENST00000273342 M0R381 172 aa9.96□□□□□ -0.82
COL8A1-202ENST00000273342 CLEC3BP05452 202 aa9.96□□□□□ -0.82
COL8A1-202ENST00000273342 LAGE3Q14657 143 aa9.96□□□□□ -0.82
COL8A1-202ENST00000273342 ARL17AQ8IVW1 177 aa9.96□□□□□ -0.82
COL8A1-202ENST00000273342 ZNF418Q8TF45 676 aaPredicted RBP9.96□□□□□ -0.82
COL8A1-202ENST00000273342 AGPAT4-IT1Q9H0P7 198 aa9.96□□□□□ -0.82
COL8A1-202ENST00000273342 CHTOPQ9Y3Y2 248 aaKnown RBP9.96□□□□□ -0.82
COL8A1-202ENST00000273342 LY6LH3BQJ8 138 aa9.96□□□□□ -0.82
COL8A1-202ENST00000273342 ATP5LO75964 103 aa9.96□□□□□ -0.82
COL8A1-202ENST00000273342 IGF1P05019 195 aa9.96□□□□□ -0.82
COL8A1-202ENST00000273342 PTH2Q96A98 100 aa9.95□□□□□ -0.82
COL8A1-202ENST00000273342 VKORC1Q9BQB6 163 aa9.95□□□□□ -0.82
COL8A1-202ENST00000273342 F8W1H4 67 aa9.95□□□□□ -0.82
COL8A1-202ENST00000273342 J3QR89 54 aa9.95□□□□□ -0.82
COL8A1-202ENST00000273342 PGPEP1Q9NXJ5 209 aa9.95□□□□□ -0.82
COL8A1-202ENST00000273342 C15orf32Q32M92 178 aa9.94□□□□□ -0.82
COL8A1-202ENST00000273342 IGKV3-7A0A075B6H7 116 aa9.94□□□□□ -0.82
COL8A1-202ENST00000273342 IGLV2-18A0A075B6J9 118 aa9.94□□□□□ -0.82
COL8A1-202ENST00000273342 RAB9AP51151 201 aa9.94□□□□□ -0.82
COL8A1-202ENST00000273342 ZNF672Q499Z4 452 aaPredicted RBP9.94□□□□□ -0.82
COL8A1-202ENST00000273342 CLEC19AQ6UXS0 136 aa9.94□□□□□ -0.82
COL8A1-202ENST00000273342 MRPL16Q9NX20 251 aaKnown RBP9.94□□□□□ -0.82
COL8A1-202ENST00000273342 LINC01548A6NM66 108 aa9.93□□□□□ -0.82
COL8A1-202ENST00000273342 OR11H12B2RN74 326 aa9.93□□□□□ -0.82
COL8A1-202ENST00000273342 APOMO95445 188 aa9.93□□□□□ -0.82
COL8A1-202ENST00000273342 HLA-DRB4P13762 266 aa9.93□□□□□ -0.82
COL8A1-202ENST00000273342 SCGB1D4Q6XE38 83 aa9.93□□□□□ -0.82
COL8A1-202ENST00000273342 KLHL30-AS1Q8NEE0 82 aa9.93□□□□□ -0.82
COL8A1-202ENST00000273342 OR11H1Q8NG94 326 aa9.93□□□□□ -0.82
COL8A1-202ENST00000273342 OR11H2Q8NH07 326 aa9.93□□□□□ -0.82
COL8A1-202ENST00000273342 HLA-DRB4X5D2U9 266 aa9.93□□□□□ -0.82
COL8A1-202ENST00000273342 HRNRQ86YZ3 2850 aaPredicted RBP9.93□□□□□ -0.82
COL8A1-202ENST00000273342 A0A087WX48 190 aa9.93□□□□□ -0.82
COL8A1-202ENST00000273342 NDUFS8O00217 210 aa9.93□□□□□ -0.82
COL8A1-202ENST00000273342 CD3EP07766 207 aa9.93□□□□□ -0.82
COL8A1-202ENST00000273342 IGFL3Q6UXB1 125 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms