RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 KIR2DL4Q99706 377 aa11.44□□□□□ -0.58
CNOT9-201ENST00000273064 HOXB4P17483 251 aaPredicted RBP11.44□□□□□ -0.58
CNOT9-201ENST00000273064 CD300EQ496F6 205 aaPredicted RBP11.44□□□□□ -0.58
CNOT9-201ENST00000273064 KNCNA6PVL3 124 aa11.44□□□□□ -0.58
CNOT9-201ENST00000273064 NPSP0C0P6 89 aa11.44□□□□□ -0.58
CNOT9-201ENST00000273064 IGLC2P0DOY2 106 aa11.44□□□□□ -0.58
CNOT9-201ENST00000273064 IGLC3P0DOY3 106 aa11.44□□□□□ -0.58
CNOT9-201ENST00000273064 FOXE3Q13461 319 aa11.44□□□□□ -0.58
CNOT9-201ENST00000273064 AMMECR1LQ6DCA0 310 aa11.44□□□□□ -0.58
CNOT9-201ENST00000273064 C19orf84I3L1E1 186 aa11.43□□□□□ -0.58
CNOT9-201ENST00000273064 NPYP01303 97 aa11.43□□□□□ -0.58
CNOT9-201ENST00000273064 CTSGP08311 255 aa11.43□□□□□ -0.58
CNOT9-201ENST00000273064 C8orf86Q6ZUL3 223 aa11.43□□□□□ -0.58
CNOT9-201ENST00000273064 YPEL4Q96NS1 127 aa11.43□□□□□ -0.58
CNOT9-201ENST00000273064 CHCHD1Q96BP2 118 aaKnown RBP11.43□□□□□ -0.58
CNOT9-201ENST00000273064 MRPL27Q9P0M9 148 aaKnown RBP11.43□□□□□ -0.58
CNOT9-201ENST00000273064 DCHS1Q96JQ0 3298 aa11.43□□□□□ -0.58
CNOT9-201ENST00000273064 B4DSR2 109 aa11.43□□□□□ -0.58
CNOT9-201ENST00000273064 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.43□□□□□ -0.58
CNOT9-201ENST00000273064 RIPPLY3P57055 190 aa11.43□□□□□ -0.58
CNOT9-201ENST00000273064 MRPL51Q4U2R6 128 aaKnown RBP11.43□□□□□ -0.58
CNOT9-201ENST00000273064 COL5A1P20908 1838 aaPredicted RBP11.42□□□□□ -0.58
CNOT9-201ENST00000273064 IGHV1-69DA0A0B4J2H0 117 aa11.42□□□□□ -0.58
CNOT9-201ENST00000273064 A0A0U1RRA0 63 aa11.42□□□□□ -0.58
CNOT9-201ENST00000273064 IGHV1-69P01742 117 aa11.42□□□□□ -0.58
CNOT9-201ENST00000273064 HIST2H2BDQ6DRA6 164 aa11.42□□□□□ -0.58
CNOT9-201ENST00000273064 IGHV4-30-2A0A087WSY4 118 aa11.42□□□□□ -0.58
CNOT9-201ENST00000273064 TRAV21A0A0B4J279 112 aa11.42□□□□□ -0.58
CNOT9-201ENST00000273064 MSMBP08118 114 aa11.42□□□□□ -0.58
CNOT9-201ENST00000273064 COA6Q5JTJ3 125 aaKnown RBP11.42□□□□□ -0.58
CNOT9-201ENST00000273064 ZC2HC1BQ5TFG8 222 aa11.42□□□□□ -0.58
CNOT9-201ENST00000273064 WIPF2Q8TF74 440 aaPredicted RBP11.42□□□□□ -0.58
CNOT9-201ENST00000273064 IGF2BP2-AS1Q96M15 143 aa11.42□□□□□ -0.58
CNOT9-201ENST00000273064 OOSP1A8MZH6 123 aa11.42□□□□□ -0.58
CNOT9-201ENST00000273064 LDLRAD2Q5SZI1 272 aa11.42□□□□□ -0.58
CNOT9-201ENST00000273064 PET117Q6UWS5 81 aa11.42□□□□□ -0.58
CNOT9-201ENST00000273064 PIP4P2Q8N4L2 257 aa11.42□□□□□ -0.58
CNOT9-201ENST00000273064 C2orf88Q9BSF0 95 aa11.42□□□□□ -0.58
CNOT9-201ENST00000273064 IGLV2-8P01709 118 aa11.41□□□□□ -0.58
CNOT9-201ENST00000273064 IGHV4-39P01824 125 aa11.41□□□□□ -0.58
CNOT9-201ENST00000273064 FAM231DQ6ZW35 169 aa11.41□□□□□ -0.58
CNOT9-201ENST00000273064 AGPAT4-IT1Q9H0P7 198 aa11.41□□□□□ -0.58
CNOT9-201ENST00000273064 LTAP01374 205 aa11.41□□□□□ -0.58
CNOT9-201ENST00000273064 GDF5OSQ5U4N7 250 aa11.41□□□□□ -0.58
CNOT9-201ENST00000273064 FAM110DQ8TAY7 271 aaPredicted RBP11.41□□□□□ -0.58
CNOT9-201ENST00000273064 FANCD2OSQ96PS1 177 aa11.41□□□□□ -0.58
CNOT9-201ENST00000273064 TNFRSF6BO95407 300 aa11.4□□□□□ -0.58
CNOT9-201ENST00000273064 SPINK13Q1W4C9 94 aa11.4□□□□□ -0.58
CNOT9-201ENST00000273064 FAM104BQ5XKR9 115 aa11.4□□□□□ -0.58
CNOT9-201ENST00000273064 Q71RC1 249 aaPredicted RBP11.4□□□□□ -0.58
CNOT9-201ENST00000273064 SIGLEC8Q9NYZ4 499 aa11.4□□□□□ -0.58
CNOT9-201ENST00000273064 DLEU1O43261 78 aa11.4□□□□□ -0.58
CNOT9-201ENST00000273064 FABP2P12104 132 aa11.4□□□□□ -0.58
CNOT9-201ENST00000273064 HERVK_113P61574 105 aa11.4□□□□□ -0.58
CNOT9-201ENST00000273064 LYPD1Q8N2G4 141 aa11.4□□□□□ -0.58
CNOT9-201ENST00000273064 Q8N9W7 124 aa11.4□□□□□ -0.58
CNOT9-201ENST00000273064 PCSK5Q92824 1860 aa11.4□□□□□ -0.58
CNOT9-201ENST00000273064 IGHV4-59P01825 116 aa11.4□□□□□ -0.58
CNOT9-201ENST00000273064 OR11H6Q8NGC7 330 aa11.4□□□□□ -0.58
CNOT9-201ENST00000273064 LINC01587Q99440 93 aa11.4□□□□□ -0.58
CNOT9-201ENST00000273064 KLK9Q9UKQ9 250 aa11.4□□□□□ -0.58
CNOT9-201ENST00000273064 CENPVL3A0A0U1RRI6 287 aa11.4□□□□□ -0.59
CNOT9-201ENST00000273064 DEFB136Q30KP8 78 aa11.4□□□□□ -0.59
CNOT9-201ENST00000273064 A0A1B0GW15 77 aa11.39□□□□□ -0.59
CNOT9-201ENST00000273064 RASL11AQ6T310 242 aa11.39□□□□□ -0.59
CNOT9-201ENST00000273064 TTTY13Q9BZ97 58 aa11.39□□□□□ -0.59
CNOT9-201ENST00000273064 COL4A2P08572 1712 aa11.39□□□□□ -0.59
CNOT9-201ENST00000273064 UBE2E2Q96LR5 201 aa11.39□□□□□ -0.59
CNOT9-201ENST00000273064 C20orf144Q9BQM9 153 aa11.39□□□□□ -0.59
CNOT9-201ENST00000273064 TRBV7-1A0A0A6YYK4 115 aa11.39□□□□□ -0.59
CNOT9-201ENST00000273064 K7EMI3 77 aa11.39□□□□□ -0.59
CNOT9-201ENST00000273064 TRBV12-3P01733 135 aa11.39□□□□□ -0.59
CNOT9-201ENST00000273064 PRSS22Q9GZN4 317 aa11.38□□□□□ -0.59
CNOT9-201ENST00000273064 TNRC18O15417 2968 aaPredicted RBP11.38□□□□□ -0.59
CNOT9-201ENST00000273064 IGLV11-55A0A075B6I3 123 aa11.38□□□□□ -0.59
CNOT9-201ENST00000273064 PDE6HQ13956 83 aa11.38□□□□□ -0.59
CNOT9-201ENST00000273064 SYT8Q8NBV8 401 aa11.38□□□□□ -0.59
CNOT9-201ENST00000273064 NXT2Q9NPJ8 142 aaKnown RBP11.38□□□□□ -0.59
CNOT9-201ENST00000273064 ZNF492Q9P255 531 aa11.38□□□□□ -0.59
CNOT9-201ENST00000273064 PLP1P60201 277 aa11.38□□□□□ -0.59
CNOT9-201ENST00000273064 ATP5LO75964 103 aa11.37□□□□□ -0.59
CNOT9-201ENST00000273064 MTURNQ8N3F0 131 aa11.37□□□□□ -0.59
CNOT9-201ENST00000273064 RNF114Q9Y508 228 aa11.37□□□□□ -0.59
CNOT9-201ENST00000273064 GNRH2O43555 120 aa11.37□□□□□ -0.59
CNOT9-201ENST00000273064 IGHV3-53P01767 116 aa11.37□□□□□ -0.59
CNOT9-201ENST00000273064 SP5Q6BEB4 398 aaPredicted RBP11.37□□□□□ -0.59
CNOT9-201ENST00000273064 ST20Q9HBF5 79 aa11.37□□□□□ -0.59
CNOT9-201ENST00000273064 YAE1D1Q9NRH1 226 aa11.37□□□□□ -0.59
CNOT9-201ENST00000273064 DKK2Q9UBU2 259 aa11.37□□□□□ -0.59
CNOT9-201ENST00000273064 CFHR4Q92496 578 aa11.36□□□□□ -0.59
CNOT9-201ENST00000273064 TP53TG3Q9ULZ0 132 aa11.36□□□□□ -0.59
CNOT9-201ENST00000273064 CYSLTR1Q9Y271 337 aa11.36□□□□□ -0.59
CNOT9-201ENST00000273064 DMDP11532 3685 aa11.36□□□□□ -0.59
CNOT9-201ENST00000273064 USP24Q9UPU5 2620 aa11.36□□□□□ -0.59
CNOT9-201ENST00000273064 SRSF1Q07955 248 aaKnown RBP eCLIP11.36□□□□□ -0.592e-9■■■□□ 16.2
CNOT9-201ENST00000273064 DTX2Q86UW9 622 aa11.36□□□□□ -0.59
CNOT9-201ENST00000273064 TMEM14CQ9P0S9 112 aa11.36□□□□□ -0.59
CNOT9-201ENST00000273064 TMEM8BA6NDV4 472 aa11.36□□□□□ -0.59
CNOT9-201ENST00000273064 DPM2O94777 84 aa11.36□□□□□ -0.59
CNOT9-201ENST00000273064 ANXA2RQ3ZCQ2 193 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms