RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 TSSC4Q9Y5U2 329 aaPredicted RBP11.57□□□□□ -0.56
COPS3-201ENST00000268717 WNK1Q9H4A3 2382 aa11.57□□□□□ -0.56
COPS3-201ENST00000268717 TRAV2A0A0B4J234 112 aa11.57□□□□□ -0.56
COPS3-201ENST00000268717 XKRY2A2RUG3 117 aa11.57□□□□□ -0.56
COPS3-201ENST00000268717 SH2D1AO60880 128 aa11.57□□□□□ -0.56
COPS3-201ENST00000268717 EDN2P20800 178 aa11.57□□□□□ -0.56
COPS3-201ENST00000268717 ERCC8Q13216 396 aa11.57□□□□□ -0.56
COPS3-201ENST00000268717 RBPMS2Q6ZRY4 209 aaKnown RBP11.57□□□□□ -0.56
COPS3-201ENST00000268717 OR9G4Q8NGQ1 327 aa11.57□□□□□ -0.56
COPS3-201ENST00000268717 OR10J6PQ8NGY7 276 aa11.57□□□□□ -0.56
COPS3-201ENST00000268717 ASCL2Q99929 193 aa11.57□□□□□ -0.56
COPS3-201ENST00000268717 GPR61Q9BZJ8 451 aa11.57□□□□□ -0.56
COPS3-201ENST00000268717 SLURP1P55000 103 aa11.56□□□□□ -0.56
COPS3-201ENST00000268717 RPS20P60866 119 aaKnown RBP11.56□□□□□ -0.56
COPS3-201ENST00000268717 DEFB136Q30KP8 78 aa11.56□□□□□ -0.56
COPS3-201ENST00000268717 CITED1Q99966 193 aa11.56□□□□□ -0.56
COPS3-201ENST00000268717 MS4A6AQ9H2W1 248 aa11.56□□□□□ -0.56
COPS3-201ENST00000268717 A0A1B0GXF2 115 aa11.55□□□□□ -0.56
COPS3-201ENST00000268717 FABP5P3A8MUU1 101 aa11.55□□□□□ -0.56
COPS3-201ENST00000268717 UBE2CO00762 179 aa11.55□□□□□ -0.56
COPS3-201ENST00000268717 HLA-DQA1P01909 254 aa11.55□□□□□ -0.56
COPS3-201ENST00000268717 CD28P10747 220 aa11.55□□□□□ -0.56
COPS3-201ENST00000268717 KRTAP10-3P60369 221 aa11.55□□□□□ -0.56
COPS3-201ENST00000268717 FABP9Q0Z7S8 132 aa11.55□□□□□ -0.56
COPS3-201ENST00000268717 HIST2H2BDQ6DRA6 164 aa11.55□□□□□ -0.56
COPS3-201ENST00000268717 GTSF1Q8WW33 167 aa11.55□□□□□ -0.56
COPS3-201ENST00000268717 K7EQG2 157 aa11.54□□□□□ -0.56
COPS3-201ENST00000268717 SNRPEP62304 92 aaKnown RBP11.54□□□□□ -0.56
COPS3-201ENST00000268717 SNRPD3P62318 126 aaKnown RBP11.54□□□□□ -0.56
COPS3-201ENST00000268717 HIST1H1AQ02539 215 aaPredicted RBP11.54□□□□□ -0.56
COPS3-201ENST00000268717 ADAMTSL5Q6ZMM2 481 aa11.54□□□□□ -0.56
COPS3-201ENST00000268717 TMEM136Q6ZRR5 245 aa11.54□□□□□ -0.56
COPS3-201ENST00000268717 OR8A1Q8NGG7 326 aa11.54□□□□□ -0.56
COPS3-201ENST00000268717 SNURFLB1AK76 121 aa11.53□□□□□ -0.56
COPS3-201ENST00000268717 PAFAH1B2P68402 229 aa11.53□□□□□ -0.56
COPS3-201ENST00000268717 LINC01559Q495D7 138 aa11.53□□□□□ -0.56
COPS3-201ENST00000268717 COA6Q5JTJ3 125 aaKnown RBP11.53□□□□□ -0.56
COPS3-201ENST00000268717 MRPL54Q6P161 138 aaKnown RBP11.53□□□□□ -0.56
COPS3-201ENST00000268717 RAX2Q96IS3 184 aa11.53□□□□□ -0.56
COPS3-201ENST00000268717 FAM19A4Q96LR4 140 aa11.53□□□□□ -0.56
COPS3-201ENST00000268717 A0A1B0GW15 77 aa11.53□□□□□ -0.56
COPS3-201ENST00000268717 TMEM189A5PLL7 270 aa11.53□□□□□ -0.56
COPS3-201ENST00000268717 ZNF80P51504 273 aaPredicted RBP11.53□□□□□ -0.56
COPS3-201ENST00000268717 PRR31Q5SQ13 230 aa11.53□□□□□ -0.56
COPS3-201ENST00000268717 APRG1Q8IVJ8 170 aa11.53□□□□□ -0.56
COPS3-201ENST00000268717 DLX4Q92988 240 aaPredicted RBP11.53□□□□□ -0.56
COPS3-201ENST00000268717 MRPL18Q9H0U6 180 aaKnown RBP11.53□□□□□ -0.56
COPS3-201ENST00000268717 SIGLEC8Q9NYZ4 499 aa11.53□□□□□ -0.56
COPS3-201ENST00000268717 CSN3P07498 182 aa11.52□□□□□ -0.57
COPS3-201ENST00000268717 CRISP2P16562 243 aa11.52□□□□□ -0.57
COPS3-201ENST00000268717 HOXA5P20719 270 aa11.52□□□□□ -0.57
COPS3-201ENST00000268717 HBBP68871 147 aa11.52□□□□□ -0.57
COPS3-201ENST00000268717 CITED2Q99967 270 aaPredicted RBP11.52□□□□□ -0.57
COPS3-201ENST00000268717 SELENOKQ9Y6D0 94 aa11.52□□□□□ -0.57
COPS3-201ENST00000268717 VWFP04275 2813 aa11.52□□□□□ -0.57
COPS3-201ENST00000268717 IGKV3-7A0A075B6H7 116 aa11.51□□□□□ -0.57
COPS3-201ENST00000268717 CCL24O00175 119 aa11.51□□□□□ -0.57
COPS3-201ENST00000268717 ODF3Q96PU9 254 aa11.51□□□□□ -0.57
COPS3-201ENST00000268717 SPINK4O60575 86 aa11.5□□□□□ -0.57
COPS3-201ENST00000268717 S100A8P05109 93 aa11.5□□□□□ -0.57
COPS3-201ENST00000268717 NDUFA6P56556 154 aa11.5□□□□□ -0.57
COPS3-201ENST00000268717 C11orf44Q8N8P7 122 aa11.5□□□□□ -0.57
COPS3-201ENST00000268717 PGLYRP4Q96LB8 373 aa11.5□□□□□ -0.57
COPS3-201ENST00000268717 DUX3Q96PT4 197 aa11.5□□□□□ -0.57
COPS3-201ENST00000268717 TRAV25A0A0B4J276 109 aa11.49□□□□□ -0.57
COPS3-201ENST00000268717 A0A1B0GUT8 65 aa11.49□□□□□ -0.57
COPS3-201ENST00000268717 FRMD6-AS1P0C7T7 363 aa11.49□□□□□ -0.57
COPS3-201ENST00000268717 ZFAND2AQ8N6M9 145 aa11.49□□□□□ -0.57
COPS3-201ENST00000268717 GATD1Q8NB37 220 aa11.49□□□□□ -0.57
COPS3-201ENST00000268717 GZMBP10144 247 aa11.49□□□□□ -0.57
COPS3-201ENST00000268717 CTRLP40313 264 aa11.49□□□□□ -0.57
COPS3-201ENST00000268717 RIGQ13278 110 aa11.49□□□□□ -0.57
COPS3-201ENST00000268717 APCSP02743 223 aa11.48□□□□□ -0.57
COPS3-201ENST00000268717 IGLC6P0CF74 106 aa11.48□□□□□ -0.57
COPS3-201ENST00000268717 RAB4BP61018 213 aa11.48□□□□□ -0.57
COPS3-201ENST00000268717 PSMG4Q5JS54 123 aa11.48□□□□□ -0.57
COPS3-201ENST00000268717 WFDC3Q8IUB2 231 aa11.48□□□□□ -0.57
COPS3-201ENST00000268717 DYNLRB2Q8TF09 96 aa11.48□□□□□ -0.57
COPS3-201ENST00000268717 BORCS7Q96B45 105 aa11.48□□□□□ -0.57
COPS3-201ENST00000268717 TRAV21A0A0B4J279 112 aa11.47□□□□□ -0.57
COPS3-201ENST00000268717 A0A0J9YX75 114 aa11.47□□□□□ -0.57
COPS3-201ENST00000268717 DUSP14O95147 198 aaKnown RBP11.47□□□□□ -0.57
COPS3-201ENST00000268717 ORM1P02763 201 aa11.47□□□□□ -0.57
COPS3-201ENST00000268717 ZNF688P0C7X2 276 aa11.47□□□□□ -0.57
COPS3-201ENST00000268717 DEFB114Q30KQ6 69 aa11.47□□□□□ -0.57
COPS3-201ENST00000268717 FOXI2Q6ZQN5 318 aa11.47□□□□□ -0.57
COPS3-201ENST00000268717 CNFNQ9BYD5 112 aa11.47□□□□□ -0.57
COPS3-201ENST00000268717 ADARB2-AS1A8MUL3 147 aa11.46□□□□□ -0.57
COPS3-201ENST00000268717 KLLNB2CW77 178 aa11.46□□□□□ -0.57
COPS3-201ENST00000268717 F6UB75 175 aa11.46□□□□□ -0.57
COPS3-201ENST00000268717 ZNF705DP0CH99 300 aaPredicted RBP11.46□□□□□ -0.57
COPS3-201ENST00000268717 ZNF705BP0CI00 300 aaPredicted RBP11.46□□□□□ -0.57
COPS3-201ENST00000268717 TFPI2P48307 235 aa11.46□□□□□ -0.57
COPS3-201ENST00000268717 GDF5OSQ5U4N7 250 aa11.46□□□□□ -0.57
COPS3-201ENST00000268717 EBLN2Q6P2I7 272 aa11.46□□□□□ -0.57
COPS3-201ENST00000268717 ZNF575Q86XF7 245 aa11.46□□□□□ -0.57
COPS3-201ENST00000268717 NDUFA11Q86Y39 141 aa11.46□□□□□ -0.57
COPS3-201ENST00000268717 FER1L6-AS1Q8NA97 138 aa11.46□□□□□ -0.57
COPS3-201ENST00000268717 SPAG8Q99932 426 aaPredicted RBP11.46□□□□□ -0.57
COPS3-201ENST00000268717 A0A1W2PRX2 142 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms