RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 DUX3Q96PT4 197 aa9.16□□□□□ -0.94
VPS33A-201ENST00000267199 M0R2P5 195 aa9.16□□□□□ -0.94
VPS33A-201ENST00000267199 HLA-DMBP28068 263 aa9.16□□□□□ -0.94
VPS33A-201ENST00000267199 MSMPQ1L6U9 139 aa9.16□□□□□ -0.94
VPS33A-201ENST00000267199 CEND1Q8N111 149 aa9.16□□□□□ -0.94
VPS33A-201ENST00000267199 TRBV7-9A0A0J9YWB2 115 aa9.16□□□□□ -0.94
VPS33A-201ENST00000267199 PROP1O75360 226 aa9.16□□□□□ -0.94
VPS33A-201ENST00000267199 PDE6HQ13956 83 aa9.16□□□□□ -0.94
VPS33A-201ENST00000267199 ANXA2RQ3ZCQ2 193 aa9.16□□□□□ -0.94
VPS33A-201ENST00000267199 PRADC1Q9BSG0 188 aa9.16□□□□□ -0.94
VPS33A-201ENST00000267199 FAM167A-AS1Q96KT0 104 aa9.15□□□□□ -0.94
VPS33A-201ENST00000267199 CTSZQ9UBR2 303 aa9.15□□□□□ -0.94
VPS33A-201ENST00000267199 OOSP1A8MZH6 123 aa9.15□□□□□ -0.94
VPS33A-201ENST00000267199 M0R1W7 72 aa9.15□□□□□ -0.94
VPS33A-201ENST00000267199 SPRY2O43597 315 aa9.15□□□□□ -0.94
VPS33A-201ENST00000267199 C12orf74Q32Q52 190 aa9.15□□□□□ -0.94
VPS33A-201ENST00000267199 MINOS1Q5TGZ0 78 aa9.15□□□□□ -0.94
VPS33A-201ENST00000267199 LINC01545Q5VT33 79 aa9.15□□□□□ -0.94
VPS33A-201ENST00000267199 MINOS1-NBL1R4GNA1 71 aa9.15□□□□□ -0.94
VPS33A-201ENST00000267199 CEP295Q9C0D2 2601 aa9.15□□□□□ -0.94
VPS33A-201ENST00000267199 C2orf70A6NJV1 201 aa9.15□□□□□ -0.94
VPS33A-201ENST00000267199 FXYD2P54710 66 aa9.15□□□□□ -0.94
VPS33A-201ENST00000267199 PIP4P1Q86T03 277 aa9.15□□□□□ -0.94
VPS33A-201ENST00000267199 DTX2Q86UW9 622 aa9.15□□□□□ -0.94
VPS33A-201ENST00000267199 Q8N8P6 123 aa9.15□□□□□ -0.94
VPS33A-201ENST00000267199 RNF114Q9Y508 228 aa9.15□□□□□ -0.94
VPS33A-201ENST00000267199 CEP192Q8TEP8 1941 aa9.15□□□□□ -0.94
VPS33A-201ENST00000267199 BRWD1-AS2P59051 145 aa9.15□□□□□ -0.95
VPS33A-201ENST00000267199 WFDC2Q14508 124 aa9.15□□□□□ -0.95
VPS33A-201ENST00000267199 THAP8Q8NA92 274 aa9.15□□□□□ -0.95
VPS33A-201ENST00000267199 NAV3Q8IVL0 2385 aa9.14□□□□□ -0.95
VPS33A-201ENST00000267199 TRBV25-1A0A075B6N4 114 aa9.14□□□□□ -0.95
VPS33A-201ENST00000267199 TRAV41A0A0B4J266 112 aa9.14□□□□□ -0.95
VPS33A-201ENST00000267199 IGFL2Q6UWQ7 119 aa9.14□□□□□ -0.95
VPS33A-201ENST00000267199 SPXQ9BT56 116 aa9.14□□□□□ -0.95
VPS33A-201ENST00000267199 NPFFR1Q9GZQ6 430 aa9.14□□□□□ -0.95
VPS33A-201ENST00000267199 HCFC1P51610 2035 aa9.14□□□□□ -0.95
VPS33A-201ENST00000267199 TRAV8-3A0A0A6YYJ7 113 aa9.14□□□□□ -0.95
VPS33A-201ENST00000267199 ZNF688P0C7X2 276 aa9.14□□□□□ -0.95
VPS33A-201ENST00000267199 HLA-DRB4P13762 266 aa9.14□□□□□ -0.95
VPS33A-201ENST00000267199 IGFBPL1Q8WX77 278 aa9.14□□□□□ -0.95
VPS33A-201ENST00000267199 MSRB1Q9NZV6 116 aa9.14□□□□□ -0.95
VPS33A-201ENST00000267199 HLA-DRB4X5D2U9 266 aa9.14□□□□□ -0.95
VPS33A-201ENST00000267199 MYMXA0A1B0GTQ4 84 aa9.14□□□□□ -0.95
VPS33A-201ENST00000267199 RRN3P1Q2M238 152 aa9.14□□□□□ -0.95
VPS33A-201ENST00000267199 BRD3OSQ6XYD6 125 aa9.14□□□□□ -0.95
VPS33A-201ENST00000267199 COPS9Q8WXC6 57 aa9.14□□□□□ -0.95
VPS33A-201ENST00000267199 NCKAP5O14513 1909 aa9.14□□□□□ -0.95
VPS33A-201ENST00000267199 TANC2Q9HCD6 1990 aa9.14□□□□□ -0.95
VPS33A-201ENST00000267199 P0C879 139 aa9.14□□□□□ -0.95
VPS33A-201ENST00000267199 PPDPFLQ8WWR9 84 aa9.14□□□□□ -0.95
VPS33A-201ENST00000267199 TP53TG1Q9Y2A0 90 aa9.14□□□□□ -0.95
VPS33A-201ENST00000267199 FCN3O75636 299 aa9.13□□□□□ -0.95
VPS33A-201ENST00000267199 EGR2P11161 476 aaPredicted RBP9.13□□□□□ -0.95
VPS33A-201ENST00000267199 TMEM190Q8WZ59 177 aa9.13□□□□□ -0.95
VPS33A-201ENST00000267199 ITLN2Q8WWU7 325 aaPredicted RBP9.13□□□□□ -0.95
VPS33A-201ENST00000267199 MRPL36Q9P0J6 103 aaKnown RBP9.13□□□□□ -0.95
VPS33A-201ENST00000267199 NCOR2Q9Y618 2525 aa9.13□□□□□ -0.95
VPS33A-201ENST00000267199 OVOL1O14753 267 aa9.13□□□□□ -0.95
VPS33A-201ENST00000267199 SEM1Q6ZVN7 128 aa9.13□□□□□ -0.95
VPS33A-201ENST00000267199 KLF12Q9Y4X4 402 aa9.13□□□□□ -0.95
VPS33A-201ENST00000267199 MYO9AB2RTY4 2548 aa9.13□□□□□ -0.95
VPS33A-201ENST00000267199 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.12□□□□□ -0.95
VPS33A-201ENST00000267199 VCYO14598 125 aa9.12□□□□□ -0.95
VPS33A-201ENST00000267199 RBX1P62877 108 aa9.12□□□□□ -0.95
VPS33A-201ENST00000267199 C22orf46C9J442 243 aa9.12□□□□□ -0.95
VPS33A-201ENST00000267199 F8VRH5 84 aa9.12□□□□□ -0.95
VPS33A-201ENST00000267199 H3BRN7 92 aa9.12□□□□□ -0.95
VPS33A-201ENST00000267199 ATXN8Q156A1 80 aa9.12□□□□□ -0.95
VPS33A-201ENST00000267199 GDF5OSQ5U4N7 250 aa9.12□□□□□ -0.95
VPS33A-201ENST00000267199 ZNF503Q96F45 646 aa9.12□□□□□ -0.95
VPS33A-201ENST00000267199 TCF15Q12870 199 aa9.12□□□□□ -0.95
VPS33A-201ENST00000267199 ZNF491Q8N8L2 437 aa9.12□□□□□ -0.95
VPS33A-201ENST00000267199 KAAG1Q9UBP8 84 aa9.12□□□□□ -0.95
VPS33A-201ENST00000267199 E7EUB6 86 aa9.12□□□□□ -0.95
VPS33A-201ENST00000267199 SIVA1O15304 175 aa9.12□□□□□ -0.95
VPS33A-201ENST00000267199 SAA4P35542 130 aa9.12□□□□□ -0.95
VPS33A-201ENST00000267199 ZNF625Q96I27 306 aaPredicted RBP9.12□□□□□ -0.95
VPS33A-201ENST00000267199 LINC01587Q99440 93 aa9.12□□□□□ -0.95
VPS33A-201ENST00000267199 MOB4Q9Y3A3 225 aa9.12□□□□□ -0.95
VPS33A-201ENST00000267199 LRP4O75096 1905 aa9.11□□□□□ -0.95
VPS33A-201ENST00000267199 COX6B1P14854 86 aa9.11□□□□□ -0.95
VPS33A-201ENST00000267199 BPESC1Q9GZL8 116 aa9.11□□□□□ -0.95
VPS33A-201ENST00000267199 TMEM14CQ9P0S9 112 aa9.11□□□□□ -0.95
VPS33A-201ENST00000267199 C9orf139Q6ZV77 190 aa9.11□□□□□ -0.95
VPS33A-201ENST00000267199 SPATA12Q7Z6I5 190 aa9.11□□□□□ -0.95
VPS33A-201ENST00000267199 UTF1Q5T230 341 aa9.11□□□□□ -0.95
VPS33A-201ENST00000267199 IGLL5B9A064 214 aa9.1□□□□□ -0.95
VPS33A-201ENST00000267199 G3V318 75 aa9.1□□□□□ -0.95
VPS33A-201ENST00000267199 GP9P14770 177 aa9.1□□□□□ -0.95
VPS33A-201ENST00000267199 KIAA1549Q9HCM3 1950 aa9.1□□□□□ -0.95
VPS33A-201ENST00000267199 B5MCH6 92 aa9.1□□□□□ -0.95
VPS33A-201ENST00000267199 FGF6P10767 208 aa9.1□□□□□ -0.95
VPS33A-201ENST00000267199 SMIM2Q9BVW6 85 aa9.1□□□□□ -0.95
VPS33A-201ENST00000267199 TRBV20-1A0A075B6N2 111 aa9.1□□□□□ -0.95
VPS33A-201ENST00000267199 ATP6V0E1O15342 81 aa9.1□□□□□ -0.95
VPS33A-201ENST00000267199 CTRLP40313 264 aa9.1□□□□□ -0.95
VPS33A-201ENST00000267199 LOXL1Q08397 574 aaPredicted RBP9.1□□□□□ -0.95
VPS33A-201ENST00000267199 PIEZO1Q92508 2521 aa9.1□□□□□ -0.95
VPS33A-201ENST00000267199 PLEKHB2Q96CS7 222 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms